Previous Article | Next Article 
J Clin Microbiol. 1990 September; 28(9): 1903-1905
Reproducibility and indices of discriminatory power of microbial typing methods.
P R Hunter
Public Health Laboratory, City Hospital, Chester, United Kingdom.
ABSTRACT
When microbial strain-typing methods are compared, the most important characteristics are typeability, reproducibility, and discriminatory power. While typeability and reproducibility can be presented as numerical values, indices of discriminatory power have only recently been described. This paper examines the relationship between reproducibility and indices of discriminatory power. In an individual typing method, an inverse relationship between reproducibility and discriminatory power appears as the number of test differences required in order to distinguish between strains is increased. A method of standardizing the discriminatory power of a typing method to a predetermined reproducibility is presented. In this way the discriminatory powers of different typing methods can be compared while being standardized for the effect of reproducibility.
J Clin Microbiol. 1990 September; 28(9): 1903-1905
This article has been cited by other articles:
-
Denis, M., Rose, V., Huneau-Salaun, A., Balaine, L., Salvat, G.
(2008). Diversity of Pulsed-Field Gel Electrophoresis Profiles of Campylobacter jejuni and Campylobacter coli from Broiler Chickens in France. Poult. Sci.
87: 1662-1671
[Abstract]
[Full Text]
-
Odds, F. C., Jacobsen, M. D.
(2008). Multilocus Sequence Typing of Pathogenic Candida Species. Eukaryot Cell
7: 1075-1084
[Full Text]
-
Colles, F. M., Dingle, K. E., Cody, A. J., Maiden, M. C. J.
(2008). Comparison of Campylobacter Populations in Wild Geese with Those in Starlings and Free-Range Poultry on the Same Farm. Appl. Environ. Microbiol.
74: 3583-3590
[Abstract]
[Full Text]
-
McManus, B. A., Coleman, D. C., Moran, G., Pinjon, E., Diogo, D., Bougnoux, M.-E., Borecka-Melkusova, S., Bujdakova, H., Murphy, P., d'Enfert, C., Sullivan, D. J.
(2008). Multilocus Sequence Typing Reveals that the Population Structure of Candida dubliniensis Is Significantly Less Divergent than That of Candida albicans. J. Clin. Microbiol.
46: 652-664
[Abstract]
[Full Text]
-
Liang, S.-Y., Watanabe, H., Terajima, J., Li, C.-C., Liao, J.-C., Tung, S. K., Chiou, C.-S.
(2007). Multilocus Variable-Number Tandem-Repeat Analysis for Molecular Typing of Shigella sonnei. J. Clin. Microbiol.
45: 3574-3580
[Abstract]
[Full Text]
-
Odds, F. C., Bougnoux, M.-E., Shaw, D. J., Bain, J. M., Davidson, A. D., Diogo, D., Jacobsen, M. D., Lecomte, M., Li, S.-Y., Tavanti, A., Maiden, M. C. J., Gow, N. A. R., d'Enfert, C.
(2007). Molecular Phylogenetics of Candida albicans. Eukaryot Cell
6: 1041-1052
[Abstract]
[Full Text]
-
Bain, J. M., Tavanti, A., Davidson, A. D., Jacobsen, M. D., Shaw, D., Gow, N. A. R., Odds, F. C.
(2007). Multilocus Sequence Typing of the Pathogenic Fungus Aspergillus fumigatus. J. Clin. Microbiol.
45: 1469-1477
[Abstract]
[Full Text]
-
Ghebremedhin, B., Konig, W., Witte, W., Hardy, K. J., Hawkey, P. M., Konig, B.
(2007). Subtyping of ST22-MRSA-IV (Barnim epidemic MRSA strain) at a university clinic in Germany from 2002 to 2005. J Med Microbiol
56: 365-375
[Abstract]
[Full Text]
-
Jacobsen, M. D., Gow, N. A. R., Maiden, M. C. J., Shaw, D. J., Odds, F. C.
(2007). Strain Typing and Determination of Population Structure of Candida krusei by Multilocus Sequence Typing. J. Clin. Microbiol.
45: 317-323
[Abstract]
[Full Text]
-
Kuhn, G., Francioli, P., Blanc, D. S.
(2007). Double-Locus Sequence Typing Using clfB and spa, a Fast and Simple Method for Epidemiological Typing of Methicillin-Resistant Staphylococcus aureus. J. Clin. Microbiol.
45: 54-62
[Abstract]
[Full Text]
-
Chiou, C.-S., Wei, H.-L., Wang, Y.-W., Liao, J.-C., Li, C.-C.
(2006). Usefulness of Inter-IS1 Spacer Polymorphisms for Subtyping of Shigella sonnei Isolates. J. Clin. Microbiol.
44: 3928-3933
[Abstract]
[Full Text]
-
Lasker, B. A.
(2006). Nucleotide Sequence-Based Analysis for Determining the Molecular Epidemiology of Penicillium marneffei.. J. Clin. Microbiol.
44: 3145-3153
[Abstract]
[Full Text]
-
Deplano, A., De Mendonca, R., De Ryck, R., Struelens, M. J.
(2006). External Quality Assessment of Molecular Typing of Staphylococcus aureus Isolates by a Network of Laboratories.. J. Clin. Microbiol.
44: 3236-3244
[Abstract]
[Full Text]
-
Matute, D. R., Sepulveda, V. E., Quesada, L. M., Goldman, G. H., Taylor, J. W., Restrepo, A., McEwen, J. G.
(2006). Microsatellite Analysis of Three Phylogenetic Species of Paracoccidioides brasiliensis.. J. Clin. Microbiol.
44: 2153-2157
[Abstract]
[Full Text]
-
Leclair, D., Pagotto, F., Farber, J. M., Cadieux, B., Austin, J. W.
(2006). Comparison of DNA fingerprinting methods for use in investigation of type e botulism outbreaks in the canadian arctic.. J. Clin. Microbiol.
44: 1635-1644
[Abstract]
[Full Text]
-
Lasker, B. A., Butler, G., Lott, T. J.
(2006). Molecular Genotyping of Candida parapsilosis Group I Clinical Isolates by Analysis of Polymorphic Microsatellite Markers.. J. Clin. Microbiol.
44: 750-759
[Abstract]
[Full Text]
-
Tavanti, A., Davidson, A. D., Johnson, E. M., Maiden, M. C. J., Shaw, D. J., Gow, N. A. R., Odds, F. C.
(2005). Multilocus Sequence Typing for Differentiation of Strains of Candida tropicalis. J. Clin. Microbiol.
43: 5593-5600
[Abstract]
[Full Text]
-
Tavanti, A., Davidson, A. D., Fordyce, M. J., Gow, N. A. R., Maiden, M. C. J., Odds, F. C.
(2005). Population Structure and Properties of Candida albicans, as Determined by Multilocus Sequence Typing. J. Clin. Microbiol.
43: 5601-5613
[Abstract]
[Full Text]
-
Lasker, B. A., Ran, Y.
(2004). Analysis of Polymorphic Microsatellite Markers for Typing Penicillium marneffei Isolates. J. Clin. Microbiol.
42: 1483-1490
[Abstract]
[Full Text]
-
Groathouse, N. A., Rivoire, B., Kim, H., Lee, H., Cho, S.-N., Brennan, P. J., Vissa, V. D.
(2004). Multiple Polymorphic Loci for Molecular Typing of Strains of Mycobacterium leprae. J. Clin. Microbiol.
42: 1666-1672
[Abstract]
[Full Text]
-
Sabbuba, N. A., Mahenthiralingam, E., Stickler, D. J.
(2003). Molecular Epidemiology of Proteus mirabilis Infections of the Catheterized Urinary Tract. J. Clin. Microbiol.
41: 4961-4965
[Abstract]
[Full Text]
-
Jacobs, J. A., Tjhie, J. H. T., Smeets, M. G. J., Schot, C. S., Schouls, L. M.
(2003). Genotyping by Amplified Fragment Length Polymorphism Analysis Reveals Persistence and Recurrence of Infection with Streptococcus anginosus Group Organisms. J. Clin. Microbiol.
41: 2862-2866
[Abstract]
[Full Text]
-
Fitzgerald, J. R., Reid, S. D., Ruotsalainen, E., Tripp, T. J., Liu, M., Cole, R., Kuusela, P., Schlievert, P. M., Jarvinen, A., Musser, J. M.
(2003). Genome Diversification in Staphylococcus aureus: Molecular Evolution of a Highly Variable Chromosomal Region Encoding the Staphylococcal Exotoxin-Like Family of Proteins. Infect. Immun.
71: 2827-2838
[Abstract]
[Full Text]
-
Cieslikowski, T., Gradecka, D., Mielczarek, M., Kaca, W.
(2003). Tandem Tetramer-Based Microsatellite Fingerprinting for Typing of Proteus mirabilis Strains. J. Clin. Microbiol.
41: 1673-1680
[Abstract]
[Full Text]
-
Warner, J. E., Onderdonk, A. B.
(2003). Method for Optimizing Pulsed-Field Gel Electrophoresis Banding Pattern Data. J. Mol. Diagn.
5: 21-27
[Abstract]
[Full Text]
-
Zadoks, R. N., van Leeuwen, W. B., Kreft, D., Fox, L. K., Barkema, H. W., Schukken, Y. H., van Belkum, A.
(2002). Comparison of Staphylococcus aureus Isolates from Bovine and Human Skin, Milking Equipment, and Bovine Milk by Phage Typing, Pulsed-Field Gel Electrophoresis, and Binary Typing. J. Clin. Microbiol.
40: 3894-3902
[Abstract]
[Full Text]
-
Lasker, B. A.
(2002). Evaluation of Performance of Four Genotypic Methods for Studying the Genetic Epidemiology of Aspergillus fumigatus Isolates. J. Clin. Microbiol.
40: 2886-2892
[Abstract]
[Full Text]
-
Lan, R., Reeves, P. R.
(2002). Pandemic Spread of Cholera: Genetic Diversity and Relationships within the Seventh Pandemic Clone of Vibrio cholerae Determined by Amplified Fragment Length Polymorphism. J. Clin. Microbiol.
40: 172-181
[Abstract]
[Full Text]
-
van Belkum, A., Struelens, M., de Visser, A., Verbrugh, H., Tibayrenc, M.
(2001). Role of Genomic Typing in Taxonomy, Evolutionary Genetics, and Microbial Epidemiology. Clin. Microbiol. Rev.
14: 547-560
[Abstract]
[Full Text]
-
Garcia-Hermoso, D., Dromer, F., Mathoulin-Pelissier, S., Janbon, G.
(2001). Are Two Cryptococcus neoformans Strains Epidemiologically Linked?. J. Clin. Microbiol.
39: 1402-1406
[Abstract]
[Full Text]
-
CIMON, B., SYMOENS, F., ZOUHAIR, R., CHABASSE, D., NOLARD, N., DEFONTAINE, A., BOUCHARA, J.-P.
(2001). Molecular epidemiology of airway colonisation by Aspergillus fumigatus in cystic fibrosis patients. J Med Microbiol
50: 367-374
[Abstract]
[Full Text]
-
Hennequin, C., Thierry, A., Richard, G. F., Lecointre, G., Nguyen, H. V., Gaillardin, C., Dujon, B.
(2001). Microsatellite Typing as a New Tool for Identification of Saccharomyces cerevisiae Strains. J. Clin. Microbiol.
39: 551-559
[Abstract]
[Full Text]
-
Mullarky, I. K., Su, C., Frieze, N., Park, Y. H., Sordillo, L. M.
(2001). Staphylococcus aureus agr Genotypes with Enterotoxin Production Capabilities Can Resist Neutrophil Bactericidal Activity. Infect. Immun.
69: 45-51
[Abstract]
[Full Text]
-
BOUCHARA, J.-P., ZOUHAIR, R., LE BOUDOUIL, S., RENIER, G., FILMON, R., CHABASSE, D., HALLET, J.-N., DEFONTAINE, A.
(2000). In-vivo selection of an azole-resistant petite mutant of Candida glabrata. J Med Microbiol
49: 977-984
[Abstract]
[Full Text]
-
Deplano, A., Schuermans, A., Van Eldere, J., Witte, W., Meugnier, H., Etienne, J., Grundmann, H., Jonas, D., Noordhoek, G. T., Dijkstra, J., van Belkum, A., van Leeuwen, W., Tassios, P. T., Legakis, N. J., van der Zee, A., Bergmans, A., Blanc, D. S., Tenover, F. C., Cookson, B. C., O'Neil, G., Struelens, M. J., The European Study Group on Epidemiological Marker,
(2000). Multicenter Evaluation of Epidemiological Typing of Methicillin-Resistant Staphylococcus aureus Strains by Repetitive-Element PCR Analysis. J. Clin. Microbiol.
38: 3527-3533
[Abstract]
[Full Text]
-
O'Brien, R., Danilowicz, B. S., Bailey, L., Flynn, O., Costello, E., O'Grady, D., Rogers, M.
(2000). Characterization of the Mycobacterium bovis Restriction Fragment Length Polymorphism DNA Probe pUCD and Performance Comparison with Standard Methods. J. Clin. Microbiol.
38: 3362-3369
[Abstract]
[Full Text]
-
Chiou, C.-S., Wei, H.-L., Yang, L.-C.
(2000). Comparison of Pulsed-Field Gel Electrophoresis and Coagulase Gene Restriction Profile Analysis Techniques in the Molecular Typing of Staphylococcus aureus. J. Clin. Microbiol.
38: 2186-2190
[Abstract]
[Full Text]
-
de la Puente-Redondo, V. A., del Blanco, N. G., Gutiérrez-Martín, C. B., García-Peña, F. J., Ferri, E. F. R.
(2000). Comparison of Different PCR Approaches for Typing of Francisella tularensis Strains. J. Clin. Microbiol.
38: 1016-1022
[Abstract]
[Full Text]
-
Pfaller, M. A., Mujeeb, I., Hollis, R. J., Jones, R. N., Doern, G. V.
(2000). Evaluation of the Discriminatory Powers of the Dienes Test and Ribotyping as Typing Methods for Proteus mirabilis. J. Clin. Microbiol.
38: 1077-1080
[Abstract]
[Full Text]
-
Fukui, K., Kato, N., Kato, H., Watanabe, K., Tatematsu, N.
(1999). Incidence of Prevotella intermedia and Prevotella nigrescens Carriage among Family Members with Subclinical Periodontal Disease. J. Clin. Microbiol.
37: 3141-3145
[Abstract]
[Full Text]
-
Saito, M., Umeda, A., Yoshida, S.-i.
(1999). Subtyping of Haemophilus influenzae Strains by Pulsed-Field Gel Electrophoresis. J. Clin. Microbiol.
37: 2142-2147
[Abstract]
[Full Text]
-
van Leeuwen, W., Verbrugh, H., van der Velden, J., van Leeuwen, N., Heck, M., van Belkum, A.
(1999). Validation of Binary Typing for Staphylococcus aureus Strains. J. Clin. Microbiol.
37: 664-674
[Abstract]
[Full Text]
-
Pestel-Caron, M., Arbeit, R. D.
(1998). Characterization of IS1245 for Strain Typing of Mycobacterium avium. J. Clin. Microbiol.
36: 1859-1863
[Abstract]
[Full Text]
Copyright © 1990 by the American Society for Microbiology. All rights reserved.