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Journal of Clinical Microbiology, October 1999, p. 3308-3315, Vol. 37, No. 10
The Rockefeller University, New York, New
York,1 and ITQB/UNL, Oeiras,
Portugal2
Received 26 May 1999/Returned for modification 2 July 1999/Accepted 16 July 1999
The great majority of clinical isolates of Streptococcus
pneumoniae carry prophages that may be identified through their
hybridization with a DNA probe specific for the pneumococcal
lytA gene (M. Ramirez, E. Severina, and A. Tomasz, J. Bacteriol. 181:3618-3625, 1999). We now show that the lytA
hybridization pattern of chromosomal SmaI digests is stable
for a given strain during extensive serial culturing in the laboratory;
the pattern is specific for the strain's clonal type, as defined by
pulsed-field gel electrophoretis (PFGE) pattern, and variations in PFGE
subtypes may be explained by changes in the number and chromosomal
localization of this prophage(s). These observations indicate that the
lytA hybridization pattern may be used as a molecular
epidemiological marker that offers additional resolution of the genetic
background of S. pneumoniae strains.
0095-1137/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Prophage Carriage as a Molecular Epidemiological
Marker in Streptococcus pneumoniae

*
Corresponding author. Mailing address: The Rockefeller
University, 1230 York Ave., New York, NY 10021. Phone: (212) 327-8277. Fax: (212) 327-8688. E-mail:
tomasz{at}rockvax.rockefeller.edu.
Permanent address: Institute of Theoretical and Experimental
Biophysics, Russian Academy of Sciences, Pushchino, Moscow Region, 142292 Russia.
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