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Journal of Clinical Microbiology, June 1999, p. 1971-1976, Vol. 37, No. 6
Departamentos de
Dermatología1 e
Inmunología,2 Facultad de Medicina,
U.A.N.L., Monterrey, N.L., México, and Bureau of
Microbiology, Laboratory Centre for Disease Control, Tunney's
Pasture, Ottawa, Canada3
Received 20 August 1998/Returned for modification 10 November
1998/Accepted 22 February 1999
An immunodominant protein from Nocardia brasiliensis,
P61, was subjected to amino-terminal and internal sequence analysis. Three sequences of 22, 17, and 38 residues, respectively, were obtained
and compared with the protein database from GenBank by using the BLAST
system. The sequences showed homology to some eukaryotic catalases and
to a bromoperoxidase-catalase from Streptomyces violaceus.
Its identity as a catalase was confirmed by analysis of its enzymatic
activity on H2O2 and by a double-staining
method on a nondenaturing polyacrylamide gel with 3,3'-diaminobenzidine and ferricyanide; the result showed only catalase activity, but no
peroxidase. By using one of the internal amino acid sequences and a
consensus catalase motif (VGNNTP), we were able to design a PCR assay
that generated a 500-bp PCR product. The amplicon was analyzed, and the
nucleotide sequence was compared to the GenBank database with the
observation of high homology to other bacterial and eukaryotic
catalases. A PCR assay based on this target sequence was performed with
primers NB10 and NB11 to confirm the presence of the NB10-NB11 gene
fragment in several N. brasiliensis strains isolated from
mycetoma. The same assay was used to determine whether there were
homologous sequences in several type strains from the genera
Nocardia, Rhodococcus, Gordona, and
Streptomyces. All of the N. brasiliensis
strains presented a positive result but only some of the actinomycetes
species tested were positive in the PCR assay. In order to confirm
these findings, genomic DNA was subjected to Southern blot analysis. A
1.7-kbp band was observed in the N. brasiliensis strains,
and bands of different molecular weight were observed in cross-reacting
actinomycetes. Sequence analysis of the amplicons of selected
actinomycetes showed high homology in this catalase fragment, thus
demonstrating that this protein is highly conserved in this group of bacteria.
0095-1137/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Distribution of a Nocardia brasiliensis
Catalase Gene Fragment in Members of the Genera
Nocardia, Gordona, and
Rhodococcus
*
Corresponding author. Mailing address: Departamento de
Inmunología, Facultad de Medicina, U.A.N.L., Monterrey, N.L.,
México 64460. Phone: (528) 333-1058. Fax: (528) 333-1058. E-mail:
msalinas{at}ccr.dsi.uanl.mx.
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