This Article
Right arrow Full Text
Right arrow Full Text (PDF)
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrowReprints and Permissions
Right arrow Copyright Information
Right arrow Books from ASM Press
Right arrow MicrobeWorld
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Lyons, S. R.
Right arrow Articles by Leys, E. J.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Lyons, S. R.
Right arrow Articles by Leys, E. J.

 Previous Article  |  Next Article 

Journal of Clinical Microbiology, June 2000, p. 2362-2365, Vol. 38, No. 6
0095-1137/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.

Quantitative Real-Time PCR for Porphyromonas gingivalis and Total Bacteria

Sharon R. Lyons,1 Ann L. Griffen,2,* and Eugene J. Leys1

Departments of Oral Biology1 and Pediatric Dentistry,2 College of Dentistry, The Ohio State University, Columbus, Ohio

Received 24 November 1999/Returned for modification 8 February 2000/Accepted 22 March 2000

Accurate quantitation of the number of cells of individual bacterial species in dental plaque samples is needed for understanding the bacterial etiology of periodontitis. Real-time PCR offers a sensitive, efficient, and reliable approach to quantitation. Using the TaqMan system we were able to determine both the amount of Porphyromonas gingivalis and the total number of bacterial cells present in plaque samples. Using species-specific primers and a fluorescent probe, detection of DNA from serial dilutions of P. gingivalis cells was linear over a large range of DNA concentrations (correlation coefficient = 0.96). No difference was observed between P. gingivalis DNA alone and the same DNA mixed with DNA isolated from dental plaque, indicating that P. gingivalis levels can be determined accurately from clinical samples. The total number of cells of all bacterial species was determined using universal primers and a fluorescent probe. Standard curves using four different bacterial species gave similar results (correlation coefficient = 0.86). Levels of both P. gingivalis and total bacteria were determined from a series of human plaque samples. High levels of P. gingivalis were observed in several of the samples from subjects with periodontitis and none of those from healthy subjects. Real-time quantitative PCR provided a sensitive and reliable method for quantitating P. gingivalis. In addition, it allowed the determination of the total number of bacterial cells present in a complex sample so that the percentage of P. gingivalis cells could be determined.


* Corresponding author. Mailing address: Department of Pediatric Dentistry, College of Dentistry, The Ohio State University, 305 W. 12th Ave., Columbus, OH 43210. Phone: (614) 292-1150. Fax: (614) 688-3077. E-mail: griffen.1{at}osu.edu.


Journal of Clinical Microbiology, June 2000, p. 2362-2365, Vol. 38, No. 6
0095-1137/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.



This article has been cited by other articles:

  • Dalwai, F., Spratt, D. A., Pratten, J. (2007). Use of Quantitative PCR and Culture Methods To Characterize Ecological Flux in Bacterial Biofilms. J. Clin. Microbiol. 45: 3072-3076 [Abstract] [Full Text]  
  • Tribble, G. D., Lamont, G. J., Progulske-Fox, A., Lamont, R. J. (2007). Conjugal Transfer of Chromosomal DNA Contributes to Genetic Variation in the Oral Pathogen Porphyromonas gingivalis. J. Bacteriol. 189: 6382-6388 [Abstract] [Full Text]  
  • Yu, J. J., Ruddy, M. J., Wong, G. C., Sfintescu, C., Baker, P. J., Smith, J. B., Evans, R. T., Gaffen, S. L. (2007). An essential role for IL-17 in preventing pathogen-initiated bone destruction: recruitment of neutrophils to inflamed bone requires IL-17 receptor-dependent signals. Blood 109: 3794-3802 [Abstract] [Full Text]  
  • Kuhbacher, T, Ott, S J, Helwig, U, Mimura, T, Rizzello, F, Kleessen, B, Gionchetti, P, Blaut, M, Campieri, M, Folsch, U R, Kamm, M A, Schreiber, S (2006). Bacterial and fungal microbiota in relation to probiotic therapy (VSL#3) in pouchitis. Gut 55: 833-841 [Abstract] [Full Text]  
  • Ritalahti, K. M., Amos, B. K., Sung, Y., Wu, Q., Koenigsberg, S. S., Loffler, F. E. (2006). Quantitative PCR Targeting 16S rRNA and Reductive Dehalogenase Genes Simultaneously Monitors Multiple Dehalococcoides Strains. Appl. Environ. Microbiol. 72: 2765-2774 [Abstract] [Full Text]  
  • Suzuki, N., Yoshida, A., Nakano, Y. (2005). Quantitative Analysis of Multi-Species Oral Biofilms by TaqMan Real-Time PCR. Clin Med Res 3: 176-185 [Abstract] [Full Text]  
  • Dick, L. K., Simonich, M. T., Field, K. G. (2005). Microplate Subtractive Hybridization To Enrich for Bacteroidales Genetic Markers for Fecal Source Identification. Appl. Environ. Microbiol. 71: 3179-3183 [Abstract] [Full Text]  
  • Zhang, Y., Lei, Y., Nobbs, A., Khammanivong, A., Herzberg, M. C. (2005). Inactivation of Streptococcus gordonii SspAB Alters Expression of Multiple Adhesin Genes. Infect. Immun. 73: 3351-3357 [Abstract] [Full Text]  
  • Matsuki, T., Watanabe, K., Fujimoto, J., Takada, T., Tanaka, R. (2004). Use of 16S rRNA Gene-Targeted Group-Specific Primers for Real-Time PCR Analysis of Predominant Bacteria in Human Feces. Appl. Environ. Microbiol. 70: 7220-7228 [Abstract] [Full Text]  
  • Marty, A., Greiner, O., Day, P. J. R., Gunziger, S., Muhlemann, K., Nadal, D. (2004). Detection of Haemophilus influenzae Type b by Real-Time PCR. J. Clin. Microbiol. 42: 3813-3815 [Abstract] [Full Text]  
  • Ott, S. J., Musfeldt, M., Ullmann, U., Hampe, J., Schreiber, S. (2004). Quantification of Intestinal Bacterial Populations by Real-Time PCR with a Universal Primer Set and Minor Groove Binder Probes: a Global Approach to the Enteric Flora. J. Clin. Microbiol. 42: 2566-2572 [Abstract] [Full Text]  
  • Ott, S J, Musfeldt, M, Wenderoth, D F, Hampe, J, Brant, O, Folsch, U R, Timmis, K N, Schreiber, S (2004). Reduction in diversity of the colonic mucosa associated bacterial microflora in patients with active inflammatory bowel disease. Gut 53: 685-693 [Abstract] [Full Text]  
  • Skovhus, T. L., Ramsing, N. B., Holmstrom, C., Kjelleberg, S., Dahllof, I. (2004). Real-Time Quantitative PCR for Assessment of Abundance of Pseudoalteromonas Species in Marine Samples. Appl. Environ. Microbiol. 70: 2373-2382 [Abstract] [Full Text]  
  • Matsuki, T., Watanabe, K., Fujimoto, J., Kado, Y., Takada, T., Matsumoto, K., Tanaka, R. (2004). Quantitative PCR with 16S rRNA-Gene-Targeted Species-Specific Primers for Analysis of Human Intestinal Bifidobacteria. Appl. Environ. Microbiol. 70: 167-173 [Abstract] [Full Text]  
  • Boutaga, K., van Winkelhoff, A. J., Vandenbroucke-Grauls, C. M. J. E., Savelkoul, P. H. M. (2003). Comparison of Real-Time PCR and Culture for Detection of Porphyromonas gingivalis in Subgingival Plaque Samples. J. Clin. Microbiol. 41: 4950-4954 [Abstract] [Full Text]  
  • Yoshida, A., Suzuki, N., Nakano, Y., Kawada, M., Oho, T., Koga, T. (2003). Development of a 5' Nuclease-Based Real-Time PCR Assay for Quantitative Detection of Cariogenic Dental Pathogens Streptococcus mutans and Streptococcus sobrinus. J. Clin. Microbiol. 41: 4438-4441 [Abstract] [Full Text]  
  • Harris, K. A., Hartley, J. C. (2003). Development of broad-range 16S rDNA PCR for use in the routine diagnostic clinical microbiology service. J Med Microbiol 52: 685-691 [Abstract] [Full Text]  
  • Greiner, O., Day, P. J. R., Altwegg, M., Nadal, D. (2003). Quantitative Detection of Moraxella catarrhalis in Nasopharyngeal Secretions by Real-Time PCR. J. Clin. Microbiol. 41: 1386-1390 [Abstract] [Full Text]  
  • Yoshida, A., Suzuki, N., Nakano, Y., Oho, T., Kawada, M., Koga, T. (2003). Development of a 5' Fluorogenic Nuclease-Based Real-Time PCR Assay for Quantitative Detection of Actinobacillus actinomycetemcomitans and Porphyromonas gingivalis. J. Clin. Microbiol. 41: 863-866 [Abstract] [Full Text]  
  • Jiang, W., Baker, H. J., Smith, B. F. (2003). Mucosal Immunization with Helicobacter, CpG DNA, and Cholera Toxin Is Protective. Infect. Immun. 71: 40-46 [Abstract] [Full Text]  
  • Asai, Y., Jinno, T., Igarashi, H., Ohyama, Y., Ogawa, T. (2002). Detection and Quantification of Oral Treponemes in Subgingival Plaque by Real-Time PCR. J. Clin. Microbiol. 40: 3334-3340 [Abstract] [Full Text]  
  • Becker, M. R., Paster, B. J., Leys, E. J., Moeschberger, M. L., Kenyon, S. G., Galvin, J. L., Boches, S. K., Dewhirst, F. E., Griffen, A. L. (2002). Molecular Analysis of Bacterial Species Associated with Childhood Caries. J. Clin. Microbiol. 40: 1001-1009 [Abstract] [Full Text]  
  • Nadkarni, M. A., Martin, F. E., Jacques, N. A., Hunter, N. (2002). Determination of bacterial load by real-time PCR using a broad-range (universal) probe and primers set. Microbiology 148: 257-266 [Abstract] [Full Text]  
  • Bowman, J. C., Abruzzo, G. K., Anderson, J. W., Flattery, A. M., Gill, C. J., Pikounis, V. B., Schmatz, D. M., Liberator, P. A., Douglas, C. M. (2001). Quantitative PCR Assay To Measure Aspergillus fumigatus Burden in a Murine Model of Disseminated Aspergillosis: Demonstration of Efficacy of Caspofungin Acetate. Antimicrob. Agents Chemother. 45: 3474-3481 [Abstract] [Full Text]  
  • Greiner, O., Day, P. J. R., Bosshard, P. P., Imeri, F., Altwegg, M., Nadal, D. (2001). Quantitative Detection of Streptococcus pneumoniae in Nasopharyngeal Secretions by Real-Time PCR. J. Clin. Microbiol. 39: 3129-3134 [Abstract] [Full Text]  
  • Frandsen, E. V. G., Poulsen, K., Curtis, M. A., Kilian, M. (2001). Evidence of Recombination in Porphyromonas gingivalis and Random Distribution of Putative Virulence Markers. Infect. Immun. 69: 4479-4485 [Abstract] [Full Text]  
  • Nikkari, S., McLaughlin, I. J., Bi, W., Dodge, D. E., Relman, D. A. (2001). Does Blood of Healthy Subjects Contain Bacterial Ribosomal DNA?. J. Clin. Microbiol. 39: 1956-1959 [Abstract] [Full Text]  
  • Klappenbach, J. A., Saxman, P. R., Cole, J. R., Schmidt, T. M. (2001). rrndb: the Ribosomal RNA Operon Copy Number Database. Nucleic Acids Res 29: 181-184 [Abstract] [Full Text]