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Journal of Clinical Microbiology, January 2001, p. 260-265, Vol. 39, No. 1
Danish Veterinary Laboratory, DK-1790
Copenhagen V,1 and National
Committee for Pig Production, DK-4000
Roskilde,2 Denmark
Received 26 April 2000/Returned for modification 27 August
2000/Accepted 19 October 2000
Sequence detection by the 5' nuclease TaqMan assay uses online
detection of internal fluorogenic probes in closed PCR tubes. Primers
and probe were chosen from a part of the omlA gene common to all serotypes of Actinobacillus pleuropneumoniae, which
gave an amplicon of 92 bp. The test was evaluated with 73 lung isolates and 120 tonsil isolates of A. pleuropneumoniae as well as
with a collection of reference strains. By using a
Ct value (cycle number in which the
fluorescence exceeds the threshold defined by the software) of 30 as
the cutoff limit, the 5' nuclease assay represents a test with 100%
sensitivity and 100% specificity. A high degree of
reproducibility of the test was demonstrated. If samples with
Ct values of
0095-1137/01/$04.00+0 DOI: 10.1128/JCM.39.1.260-265.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Evaluation of 5' Nuclease Assay for Detection
of Actinobacillus pleuropneumoniae
30 are considered positive,
the detection limit of the assay was 1 CFU/reaction tube,
corresponding to a 10-fold higher number of DNA templates. After cycle
30, nonspecific reactions appeared when testing dilutions of DNA
templates or pure cultures of A. pleuropneumoniae, as
well as when testing tonsil scrapings from specific-pathogen-free
herds. The diagnostic sensitivity, as evaluated with 586 tonsil
scrapings from animals infected with A. pleuropneumoniae,
is the same level as that of a PCR test based on the omlA
gene described previously. The 5' nuclease assay represents a fast
method for species-specific detection and identification of A. pleuropneumoniae in pure and mixed cultures. The evaluation
shows, however, that a Ct value cutoff limit of
30 must be chosen in order to obtain reliable results. The
investigation emphasizes that a thorough evaluation of the criteria
used to define a positive test result is necessary.
*
Corresponding author. Mailing address: Danish
Veterinary Laboratory, Bülowsvej 27, DK-1790 Copenhagen V,
Denmark. Phone: 45 35 30 02 01. Fax: 45 35 30 01 20. E-mail:
ang{at}svs.dk.
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