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Journal of Clinical Microbiology, December 2002, p. 4435-4438, Vol. 40, No. 12
0095-1137/02/$04.00+0     DOI: 10.1128/JCM.40.12.4435-4438.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.

Characterization of rpoB Mutations in Rifampin-Resistant Clinical Isolates of Mycobacterium tuberculosis from Turkey by DNA Sequencing and Line Probe Assay

Cengiz Cavusoglu,1* Suleyha Hilmioglu,1 Sevinc Guneri,2 and Altinay Bilgic1

Department of Microbiology and Clinical Microbiology, School of Medicine, Ege University 35100,1 Region Tuberculosis Laboratory, Kahramanlar, Izmir, Turkey2

Received 11 July 2002/ Returned for modification 3 September 2002/ Accepted 21 September 2002

Mutations in an 81-bp region of the rpoB gene associated with rifampin resistance were studied in 41 rifampin-resistant clinical strains of Mycobacterium tuberculosis isolated in Turkey. Fourteen different rpoB alleles, three of which had not been reported before, were found. A reverse hybridization-based line probe assay (the Inno-LiPA Rif.TB test) for rapid detection of the mutations was evaluated with these isolates. Rifampin resistance was correctly identified in 23 of 41 isolates (56.1%) with the kit's R probes specific for these mutations. Seventeen of 41 isolates (41.5%) yielded hybridization patterns, with at least one negative signal obtained with the S probes for the wild type. One isolate was identified as rifampin sensitive by the line probe assay. The rate of concordance of the results of the line probe assay with the results of the in vitro susceptibility test was high (97.6%). These results demonstrate that the line probe assay kit may be useful for the rapid diagnosis of rifampin-resistant tuberculosis.

* Corresponding author. Mailing address: Department of Microbiology and Clinical Microbiology, School of Medicine, Ege University, Bornova, Izmir, Turkey 35100. Phone: 90 232 388 66 23. Fax: 90 232 388 66 23, ext. 132. E-mail: cengizc{at}hotmail.com.

Journal of Clinical Microbiology, December 2002, p. 4435-4438, Vol. 40, No. 12
0095-1137/02/$04.00+0     DOI: 10.1128/JCM.40.12.4435-4438.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.



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