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Journal of Clinical Microbiology, January 2006, p. 244-250, Vol. 44, No. 1
0095-1137/06/$08.00+0     doi:10.1128/JCM.44.1.244-250.2006
Copyright © 2006, American Society for Microbiology. All Rights Reserved.

Diagnostic Oligonucleotide Microarray Fingerprinting of Bacillus Isolates

Darrell P. Chandler,1* Oleg Alferov,1 Boris Chernov,1 Don S. Daly,2 Julia Golova,1 Alexander Perov,1 Miroslava Protic,1 Richard Robison,3 Matthew Schipma,1 Amanda White,2 and Alan Willse2

Argonne National Laboratory, Argonne, Illinois 60439,1 Pacific Northwest National Laboratory, Richland, Washington 99352,2 Brigham Young University, Provo, Utah 846023

Received 9 May 2005/ Returned for modification 3 July 2005/ Accepted 19 October 2005

A genome-independent microarray and new statistical techniques were used to genotype Bacillus strains and quantitatively compare DNA fingerprints with the known taxonomy of the genus. A synthetic DNA standard was used to understand process level variability and lead to recommended standard operating procedures for microbial forensics and clinical diagnostics.


* Corresponding author. Present address: Argonne National Laboratory, Biodetection Technologies, 9700 South Cass Avenue, Bldg. 202, A-249, Argonne, IL 60439. Phone: (630) 252-4229. Fax: (630) 252-9155. E-mail: dchandler{at}anl.gov.


Journal of Clinical Microbiology, January 2006, p. 244-250, Vol. 44, No. 1
0095-1137/06/$08.00+0     doi:10.1128/JCM.44.1.244-250.2006
Copyright © 2006, American Society for Microbiology. All Rights Reserved.




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