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Journal of Clinical Microbiology, September 1998, p. 2775-2777, Vol. 36, No. 9
Geisinger Medical Center, Penn State
University Geisinger Medical Laboratories, Danville, Pennsylvania
Received 6 April 1998/Returned for modification 15 May
1998/Accepted 16 June 1998
The GNI+ card has been developed by bioMerieux Vitek as an
improvement over the GNI card for the identification of certain species
of aerobic and facultative anaerobic bacteria. In this study, we tested
304 organisms from 30 different species on both the GNI and GNI+ cards.
The GNI card correctly identified 285 (93.8%) of the isolates tested,
and the GNI+ card correctly identified 287 (94.4%) of the isolates
tested. The average time to reporting was 4.1 h for the GNI+ card
compared to 5.7 h for the GNI card (P < 0.001).
Overall, the GNI and GNI+ cards were comparable in identifying the
organisms in this study while the GNI+ card gave substantially faster
final test results.
The GNI+ card (bioMerieux Vitek,
Hazelwood, Mo.) was developed as an improvement over the GNI card
(bioMerieux Vitek) for the identification of certain species of aerobic
and facultative anaerobic bacteria. Changes have been made to shorten
the time to reporting, increase the number of organism profiles in the database, and improve the accuracy of identification of the organisms in the expanded GNI+ database (5). The database for the GNI+ card includes 18 new species as well as taxonomic changes not found in
the GNI database. The purpose of this study was to compare the
performance characteristics of the two cards.
(This study was presented, in part, at the 97th General Meeting of the
American Society for Microbiology [2a]).
All organisms tested in this study were recent patient isolates which
had been previously tested by using GNI cards. To increase the number
of species included in this study, we attempted to limit each species
to approximately 25 consecutive isolates (based on the initial GNI
result). The study also included all isolates from the same period for
which no identification was obtained with GNI cards. Collected isolates
were stored on nutrient agar slants (Remel, Lenexa, Kans.).
The test cards were inoculated with organisms which were subcultured
from the nutrient agar slants onto tryptic soy agar plates with 5%
sheep blood (Remel) and then subcultured one additional time. Organisms
were no more than 24 h old at the time of inoculation. Oxidase
tests (Remel) were performed on all organisms prior to card
inoculation.
In order to inoculate both cards from the same inoculum, a 1.0 McFarland suspension of each organism was prepared in a sufficient volume of 0.45% sterile saline (Remel) to inoculate both a GNI and a
GNI+ card. The saline was then divided into separate tubes for the
inoculation of the individual cards. All cards were inoculated within
20 min of inoculum preparation, and a portion of each bacterial suspension was streaked on a blood agar plate to check for inoculum purity. The use of the transfer tubes, filling module, sealing module,
and loading of the GNI and GNI+ cards into the reader/incubator tray
were performed according to the Vitek operator's manual. bioMerieux Vitek software version 5.01 was used.
All isolates with initial results that were not in agreement and those
with unacceptable results (<90% probability) were retested with both
cards to rule out technical error. If the discrepant results repeated
or the results agreed but were not acceptable (<90% probability),
additional testing was performed. Additional testing included the API
20E system (bioMerieux Vitek) and BBL Crystal Identification System
Enteric/Nonfermenter (Becton Dickinson Microbiology Systems,
Cockeysville, Md.) for members of the family Enterobacteriaceae and other fermentative organisms.
Nonfermentative organisms were tested with the RapID NF Plus
System (Innovative Diagnostic Systems, L.P., Norcross, Ga.). Standard
biochemical tests were also performed for some isolates. Some
isolates were sent to the Centers for Disease Control and
Prevention, Atlanta, Ga., for identification.
In comparing the results of testing of the GNI and GNI+ cards, the
results were accepted as correct if both results gave a probability of
A total of 304 isolates representing 30 species of gram-negative
bacilli were included in this study. As noted in Table
1, the GNI card and the GNI+ card
correctly identified 285 (93.8%) and 287 (94.4%) of the isolates
tested, respectively, with no supplemental testing required except for
spot tests, as previously mentioned.
0095-1137/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
Comparison of Vitek GNI and GNI+ Cards for
Identification of Gram-Negative Bacteria
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90%, both results were the same, and no supplemental or confirmatory
tests were recommended. We did not consider spot indole tests,
serological confirmation of Salmonella isolates, and
hanging-drop motility tests required for a definitive identification to
be supplemental tests, since final reporting was not delayed by these
tests.
TABLE 1.
Results of testing gram-negative bacilli with GNI and
GNI+ cardsa
All results reported as Acinetobacter lwoffii/junii in this
work are reported by Vitek as presumptive with confirmation
recommended, even though the probability reported for the test result
was
90%. Of the three isolates of A. lwoffii identified
in this study, presumptive reports of A. lwoffii/junii were given for three results with the GNI
card and two results with the GNI+ card.
Eleven tests (3.6%) with the GNI card and five tests (1.6%) with the GNI+ card gave a result of "good confidence marginal separation." The technical bulletins for the GNI and GNI+ cards state that this classification is used when the biochemical results for two organisms have an acceptable absolute likelihood for identification but resemble the biopatterns for both species in the database. Additional testing is required for identification (1, 2). Among the results with this classification, 10 of the 11 from the GNI card and three of the five from the GNI+ card listed the correct answer as the first choice. Although supplemental tests are recommended to confirm the identification of isolates with a "good confidence marginal separation" result, in practice, we often choose to retest the isolates by an alternative kit method. That was the approach we took with these isolates.
A "questionable biotype" is assigned to results with several possible identifications, all of low probability, with biochemical results atypical compared to all organisms in the database. Additional testing is required. For practical purposes, "questionable biotype" is equivalent to the category "unidentified." For the GNI and GNI+ cards, there were two and four "questionable biotype" results and one and three "unidentified" results, respectively.
One isolate of Aeromonas sp. was misidentified as Vibrio fluvialis by the GNI card. The GNI+ card misidentified three isolates. The first was an A. lwoffii isolate misidentified as Bordetella bronchiseptica. The second was an Escherichia coli inactive isolate (I.A.) misidentified as Salmonella sp. The last was a Proteus mirabilis isolate misidentified as Providencia stuartii.
As insightfully stated by Miller (4), the most difficult
question to answer in performing comparative biochemical identification studies, such as this, may be the definition of a correct versus an
incorrect response. In this study, 280 (92.1%) of 304 isolates tested
gave a result of
90% probability with both the GNI and GNI+ cards.
These were accepted as correct answers, although no attempt was made to
verify this accuracy by reference methods.
We classified three GNI+ results and one GNI result as incorrect. These results again highlight the issues raised by Miller about correct versus incorrect results (4). The one incorrect GNI result was an Aeromonas sp. which was reported as V. fluvialis with a 92% probability; however, growth in 6.5% salt was recommended as a confirmatory test. If this supplemental test had been performed, the result would likely have suggested that this identification was incorrect and additional testing was merited. Similarly, one of the three incorrect identifications with the GNI+ cards was an E. coli I.A. misidentified as Salmonella sp. All identifications of Salmonella are accompanied by the comment that serological confirmation is recommended. If such confirmation had been performed on this isolate, the results would likely have prompted additional testing.
It seems reasonable to us to classify the test results from this study into three categories: correct, as we have previously defined; incorrect; and "requires additional testing." Included in this last category are organisms fitting into the bioMerieux Vitek categories of "presumptive Acinetobacter lwoffii/junii," "good confidence marginal separation," "questionable biopattern," and "unidentified." With this classification system, the following results were obtained (with the GNI and GNI+ cards, respectively): correct, 93.8 and 94.4%; incorrect, 0.3 and 1.0%; and "requires additional testing," 5.9 and 4.6%. Thus, the results of testing with the two cards are essentially equivalent.
Clearly, the selection of organisms included in a study such as this may affect the outcome. As noted by Miller, it is important that investigators state how isolates were chosen for a particular study (4). For this study, we utilized recent, consecutive patient isolates but attempted to limit any one species to approximately 25 isolates, in order to broaden the number of species included in the study. Taking this approach, 30 different species were included in this study, with no more than 27 isolates of any one species tested. While there was no attempt to include stock organisms which historically may have been difficult to identify, we believe that our approach gave a somewhat more rigorous challenge than could have been anticipated had we tested 304 consecutive, clinical isolates.
The results of this study are similar to those reported by Colosante et al. (3) in their comparison of GNI and GNI+ cards. In another study which included an evaluation of the GNI+ card, O'Hara et al. reported an accuracy of 87.6% for the GNI+ cards; however, the authors acknowledged that the isolates included in their study represented a vigorous challenge to the products evaluated (6). The results of our study for the GNI card are very similar to results reported by Robinson et al. (8) and Rhoads et al. (7) for the GNI card.
The average time to reporting was 5.7 h for the GNI card and 4.1 h for the GNI+ card (P < 0.001 [paired t test]).
The GNI+ card is marketed as an improvement over the GNI card; however, the only significant performance difference between the two cards was the shorter time to reporting for the GNI+ card. Organism identification results were comparable for the isolates which we tested. Perhaps laboratories with a different organism mix would find additional benefits with the GNI+ card. More-rapid test results do not automatically result in more-rapid result reporting or better patient care. In our laboratory, we hold the organism identification until the antimicrobial susceptibility test results are completed (or vice versa if the susceptibility testing results are completed before the organism identification is completed). Thus, the benefits of more rapid identification must be evaluated in the context of the work flow for individual laboratories. The list price for the GNI and GNI+ cards is the same, so cost differences between the cards should not influence card selection.
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ACKNOWLEDGMENTS |
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We thank bioMerieux Vitek for providing support for this study.
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FOOTNOTES |
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* Corresponding author. Mailing address: Division of Laboratory Medicine, Geisinger Medical Center, Danville, PA 17822-0131. Phone: (717) 271-6332. Fax: (717) 271-6105. E-mail: pbourbeau{at}smtp.geisinger.edu.
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REFERENCES |
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| 1. | bioMerieux Vitek, Inc. 1996. GNI technical bulletin. bioMerieux Vitek, Inc., Hazelwood, Mo. |
| 2. | bioMerieux Vitek, Inc. 1996. GNI+ technical bulletin. bioMerieux Vitek, Inc., Hazelwood, Mo. |
| 2a. | Bourbeau, P. P., and B. J. Heiter. 1997. Comparison of the Vitek GNI and GNI plus cards for the identification of gram negative bacteria, abstr. C-455, p. 199. In Abstracts of the 97th General Meeting of the American Society for Microbiology. American Society for Microbiology, Washington, D.C. |
| 3. | Colosante, G. G., D. G. Beckwith, and S. M. Todd. 1996. Premarket evaluation of a new GNI+ card, abstr. C-390, p. 70. In Abstracts of the 96th General Meeting of the American Society for Microbiology 1996. American Society for Microbiology, Washington, D.C. |
| 4. |
Miller, J. M.
1991.
Evaluating biochemical identification systems.
J. Clin. Microbiol.
29:1559-1561 |
| 5. | Moss, N. S., D. Wilder, D. Combs, D. Monroe, J. Mayer, and R. Norris. 1996. Evaluation of the Vitek GNI+ card, abstr. C-389, p. 70. In Abstracts of the 96th General Meeting of the American Society for Microbiology 1996. American Society for Microbiology, Washington, D.C. |
| 6. | O'Hara, C. M., G. L. Westbrook, and J. M. Miller. 1997. Evaluation of Vitek GNI+ and Becton Dickinson Microbiology Systems Crystal E/NF identification systems for identification of members of the family Enterobacteriaceae and other gram-negative, glucose-fermenting and non-glucose-fermenting bacilli. J. Clin. Microbiol. 35:3269-3273[Abstract]. |
| 7. | Rhoads, S., L. Marinelli, C. A. Imperatrice, and I. Nachamkin. 1995. Comparison of Microscan WalkAway system and Vitek system for identification of gram-negative bacteria J. Clin. Microbiol. 33:3044-3046. |
| 8. | Robinson, A., Y. S. McCarter, and J. Tetreault. 1995. Comparison of Crystal Enteric/Nonfermenter system, API 20E system, and Vitek Automicrobic System for identification of gram-negative bacilli. J. Clin. Microbiol. 33:364-370[Abstract]. |
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