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Journal of Clinical Microbiology, January 1999, p. 110-116, Vol. 37, No. 1
0095-1137/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Efficiencies of Four Versions of the AMPLICOR HIV-1 MONITOR Test
for Quantification of Different Subtypes of Human Immunodeficiency
Virus Type 1
K.
Triques,1,*
J.
Coste,2
J. L.
Perret,3
C.
Segarra,2
E.
Mpoudi,4
J.
Reynes,5
E.
Delaporte,1
A.
Butcher,6
K.
Dreyer,6,
S.
Herman,6
J.
Spadoro,6 and
M.
Peeters1
Laboratoire Rétrovirus,
ORSTOM,1
Laboratoire de Biologie
Moléculaire, ETS Languedoc-Rousillon,2
and
Hôpital Gui de Chauliac,5
Montpellier, and
Hôpital Laveran,
Marseille,3 France;
Hôpital
Militaire, Yaounde, Cameroon4; and
Roche Molecular Systems, Branchburg, New
Jersey6
Received 23 April 1998/Returned for modification 12 June
1998/Accepted 1 October 1998
 |
ABSTRACT |
Three versions of a commercial human immunodeficiency virus
(HIV) type 1 (HIV-1) load test (the AMPLICOR HIV-1 MONITOR
Test versions 1.0, 1.0+, and 1.5; Roche Diagnostics, Branchburg, N.J.) were evaluated for their ability to detect and quantify HIV-1 RNA of
different genetic subtypes. Plasma samples from 96 patients infected
with various subtypes of HIV-1 (55 patients infected with subtype A, 9 with subtype B, 21 with subtype C, 2 with subtype D, 7 with subtype E,
and 2 with subtype G) and cultured virus from 29 HIV-1 reference
strains (3 of subtype A, 6 of subtype B, 5 of subtype C, 3 of subtype
D, 8 of subtype E, 3 of subtype F, and 1 of subtype G) were tested.
Detection of subtypes A and E was significantly improved with versions
1.0+ and 1.5 compared to that with version 1.0, whereas detection of
subtypes B, C, D, and G was equivalent with the three versions.
Versions 1.0, 1.0+, and 1.5 detected 65, 98, and 100% of the subtype
A-infected samples from patients, respectively, and 71, 100, and 100%
of the subtype E-infected samples from patients, respectively. Version 1.5 yielded a significant increase in viral load for samples infected with subtypes A and E (greater than 1 log10 HIV RNA
copies/ml). For samples infected with subtype B, C, and D and tested
with version 1.5, only a slight increase in viral load was observed (<0.5 log10). We also evaluated a prototype automated
version of the test that uses the same PCR primers as version 1.5. The results with the prototype automated test were highly correlated with
those of the version 1.5 test for all subtypes, but were lower overall.
The AMPLICOR HIV-1 MONITOR Test, version 1.5, yielded accurate
measurement of the HIV load for all HIV-1 subtypes tested, which should
allow the test to be used to assess disease prognosis and response to
antiretroviral treatment in patients infected with a group M HIV-1 subtype.
 |
INTRODUCTION |
Human immunodeficiency virus
(HIV) type 1 (HIV-1) is characterized by extensive genetic variability.
Phylogenetic analysis of many isolates collected from different
geographic regions worldwide shows that HIV-1 can be divided into two
groups. Group M (for major) represents the vast majority of
characterized isolates, and it comprises at least 10 different
phylogenetically related subtypes (subtypes A to J). Group O (for
outlier) represents the most divergent strains, which are mainly found
in Cameroon and Cameroonians (23, 24, 36, 37).
Preliminary results indicate a heterogeneous distribution of
genetic subtypes, with different prevalences in each country
(6). Subtype B is predominant in Europe and North America,
while all known subtypes are present in Central Africa, with a
predominance of subtype A in west and central Africa and of subtype C
in south and eastern Africa. Subtype C is also widely prevalent in
India, which is the country with the largest number of HIV-infected
people in the world, whereas subtype E is predominant in southeastern Asia.
Recent studies showed the introduction of subtype A, D, and E viruses
and even group O viruses in the United States (8, 38).
Similar data have been reported from several European countries such as
Belgium (17), France (21, 43), England
(3), Sweden (2), and Germany (15),
with subtype A being the predominant non-B HIV-1 subtype in
those countries. A study of blood donors in France showed a 16%
increase in the prevalence of individuals infected with non-subtype B
viruses between 1984 and 1995 (5). The impact of the
different genetic subtypes on the pathogenesis, the course of
HIV-1 infection, the transmissibility, and vaccine efficacy are not yet
well known and must be further studied (16). However,
several reports have shown that the performance of diagnostic assays can be influenced by genetic variability (18, 25, 26, 42).
To assess the progression of HIV-1 infection in patients, the CD4 cell
count is the most commonly used marker. In recent years studies have
shown that measurement of the viral load in plasma is also a valuable
marker for monitoring the progression of AIDS disease (19, 33,
34). To measure the response to antiretroviral therapy, a
decrease in the HIV RNA level is a better predictor than an increase in
the CD4 lymphocyte count (34, 40, 41). Therefore, several
methods for the detection of virus in plasma have been developed
(9, 39). HIV-1 p24 antigen detection in plasma by means of
an antigen binding enzyme immunoassay is easy to perform but is not
sensitive enough since it does no detect the p24 antigen in most
asymptomatic patients (9). Quantitative culture of virus
from plasma is very time-consuming and expensive, and its large-scale
application is limited due to the short transport time needed to
maintain the integrity of the samples. For these reasons, several
quantitative nucleic acid amplification assays have been developed to
quantify the HIV RNA load. The Quantiplex HIV RNA assay (Chiron)
based
on branched DNA (44), the HIV-1 RNA QT (Organon Teknika)
NASBA (nucleic acid sequence-based amplification) procedure
(20), and the AMPLICOR HIV-1 MONITOR Test (Roche
Diagnostics, Branchburg, N.J.)
is based on reverse
transcription-PCR technology with coamplification of an internal RNA
quantitation standard.
However, several studies have reported that some commercial viral load
assays (NASBA and AMPLICOR version 1.0) were not able to detect
and/or correctly quantify viral RNA in plasma from patients infected
with non-subtype B HIV-1 strains (1, 4, 12, 25, 45).
Due to the increase in international travel and the mixing of different
populations, it is evident that the different subtypes will spread into
Europe and the United States. Therefore, it is important that these
commercial viral load assays be modified so that they can detect and
accurately quantify all known HIV-1 variants. In the present study, we
evaluated the performance of three versions of the AMPLICOR HIV-1
MONITOR Test, which contain different PCR primer pairs for detection of
the HIV-1 gag gene, with plasma samples from patients
infected with different genetic subtypes of HIV-1. In addition, we
evaluated a prototype automated version of the test, in which
amplification and detection take place on the COBAS AMPLICOR instrument.
 |
MATERIALS AND METHODS |
Origin and genetic subtypes of clinical samples.
Ninety-six
plasma samples obtained from 96 different HIV-1-infected patients were
studied. Sixty of these patients live in France, where they receive
medical care; the remaining 36 patients live in Cameroon and are
followed in a hospital in that country. Fifty of the 60 patients living
in France were receiving antiretroviral therapy, whereas none of the
patients in Cameroon were receiving any antiretroviral drugs. Genetic
subtypes were determined in the gp120 region of the envelope gene by
the Heteroduplex Mobility Assay described by Delwart et al.
(13). Some samples were also characterized by sequencing the
C2-V3 region of the envelope followed by phylogenetic analysis as
described previously (21). The distribution of the genetic
subtypes among the samples was as follows: 55 subtype A, 9 subtype B,
21 subtype C, 2 subtype D, 7 subtype E, and 2 subtype G. For each
patient 20 ml of blood was drawn into tubes containing EDTA as an
anticoagulant, and the plasma samples were stored at
80°C until use.
Quantified HIV-1 reference strains.
A reference panel of 29 HIV-1 isolates of subtypes A through G was prepared as part of a study
to prepare a set of quantified, well-characterized HIV-1 subtype
standards and determine the quantitative performance of the HIV-1
MONITOR Test with HIV-1 subtypes. Details on the preparation and
characterization of the HIV-1 subtype reference panel will be described
elsewhere (35). Briefly, each isolate was cultured in vitro
by standard methods, and the culture supernatants were clarified and
frozen. The virion concentration in the culture supernatants was
determined by electron microscopic particle counting (22).
Each virus stock was diluted to 20,000 virus particles per ml in
defibrinated, normal human plasma. The 29 reference strains used in
this study represented the following subtypes: subtype A (UG273, DJ258,
and DJ263), subtype B (US1, US3, US4, CM237, BK132, and BZ167), subtype
C (ZAM18, UG278, ETH2220, SE364, and SM145), subtype D (SE365, UG270,
and UG274), subtype E (CM235, CM238, CM240, CM243, POC30506, RA12,
RA17, and NP1465), subtype F (BZ126, BZ162, and BZ163), and subtype G (HH8793).
Quantification of HIV-1 RNA.
Four versions of the AMPLICOR
HIV-1 MONITOR Test (Roche Diagnostics) were evaluated. The lower
detection limit for all the versions is 200 RNA copies/ml, and the
upper limit is 750,000 HIV RNA copies/ml. Version 1.0 is the currently
available commercial test (product codes 83088 and 83102; Roche
Diagnostics). Versions 1.0+ and 1.5 are modifications to version 1.0 to
improve the performance with non-B subtypes of HIV-1. The prototype
automated test is a modification to version 1.5 in which amplification,
detection, and calculation of results are automated on the COBAS
AMPLICOR instrument. The COBAS AMPLICOR technique, which allows fully
automated RNA and DNA amplification and detection, has been previously
described in detail (14). The four versions differ in the
internal quantitation standard RNA, the PCR primers, and the thermal
cycling conditions that they use. The sample processing procedure is
identical for all four versions. Versions 1.0 and 1.0+ use the version
1.0 quantitation standard RNA. Version 1.5 and the prototype automated
test use a modified quantitation standard RNA that contains an
additional 20 nucleotides of the HIV-1 sequence to include the primer
binding site of the new downstream PCR primer. All four versions
amplify the same region in the gag gene of HIV-1. Version
1.0 uses primers SK462 and SK431 and yields a 142-bp amplification
product. Version 1.0+ is identical to version 1.0, except that the
amplification reaction contains two additional primers, SK145 and
SK151, which are the same lengths as SK462 and SK431, respectively, and
which bind to the same sites. The nucleotide sequences of SK145 and SK151 have been modified to be more homologous to the non-B subtypes of
HIV-1. Version 1.5 uses primers SK145 and SKCC1B and yields a 155-bp
amplification product. The downstream primer (SKCC1B) was shifted
downstream by 13 nucleotides to a region more highly conserved among
the group M subtypes of HIV-1. The prototype automated test uses the
same amplification reagents as version 1.5. Versions 1.0 and 1.0+ use
the version 1.0 thermal cycling profile. The thermal cycling profiles
for version 1.5 and the prototype automated test have been reoptimized
with lower annealing temperatures to improve the performance with non-B
subtypes of HIV-1. All four versions use the same oligonucleotide
hybridization probes (SK102 and CP35) for capture of the HIV and
quantitation standard amplification products, respectively. The
detection procedure and reagents are identical for versions 1.0, 1.0+,
and 1.5. The prototype automated test uses similar detection
chemistries, except that oligonucleotide probe-coated magnetic
microparticles instead of probe-coated microwell plates are used for
capture of the amplification products.
The study protocol is illustrated in Fig.
1. Each sample was extracted in duplicate
with the version 1.0 and version 1.5 quantitation standard RNA,
according to the manufacturer's instructions. The samples processed
with the version 1.0 quantitation standard were used for version 1.0 and 1.0+ amplification; the samples processed with the version 1.5 quantitation standard were used for version 1.5 and amplification on
the COBAS instrument. Negative, low-positive, and high-positive
controls were included in each run of 10 tests.
Statistical analysis.
In order to compare to what extent the
data obtained with the AMPLICOR version 1.5 test agree between the
microwell plate version and the prototype automated test, the data were
analyzed as described by Bland and Altman (7). The analysis
was based on the differences between measurements for the same samples
by plotting the differences against the average.
 |
RESULTS |
Sensitivity for detection of HIV-1 RNA from different genetic
subtypes.
Overall, the version 1.0, 1.0+, and 1.5 tests detected
viral RNA in 73 (76%), 94 (98%), and 95 (99%) of the 96 patient
samples, respectively (Table 1). The only
sample in which HIV-1 RNA was not detected with version 1.5 was also
negative by the two other tests. It was obtained from a patient who was
infected with HIV-1 subtype B and who was receiving antiretroviral
treatment. For this same patient we were also unable to isolate the
virus from the corresponding peripheral blood mononuclear cells
(PBMCs). The version 1.0+ and 1.5 tests detected significantly more
subtype A- and E-infected samples compared to the numbers detected by version 1.0 (Table 1). Thirty-six (65%), 54 (98%), and 55 (100%) of
the 55 subtype A-infected samples were detected with the version 1.0, 1.0+, and 1.5 tests, respectively; and 5 (71.4%), 7 (100%), and 7 (100%) of the 7 subtype E-infected samples were detected by the three
tests, respectively. The only subtype C-infected sample not detected
with version 1.0 had very low HIV RNA levels with versions 1.0+ and
1.5: 288 and 294 copies per ml, respectively.
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TABLE 1.
Number and percentage of patient samples in which HIV-1
RNA was detected with versions 1.0, 1.0+, and 1.5 of the AMPLICOR
HIV-1 MONITOR Test
|
|
Table 2 presents the HIV-1 loads,
expressed as log10 HIV RNA copies per milliliter, obtained
with the panel of quantified reference strains of HIV-1. Each test
sample contained 20,000 virus particles per ml. Two of the three
subtype A strains were not detected with the version 1.0 test; all
three subtype A strains were detected with versions 1.0+ and 1.5. All
of the subtype B, C, D, E, F, and G strains were detected by versions
1.0, 1.0+, and 1.5.
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TABLE 2.
HIV-1 RNA levels determined by the three AMPLICOR HIV-1
MONITOR microwell plate tests and the prototype automated AMPLICOR
HIV-1 MONITOR Test
|
|
Efficiency of quantitation of HIV-1 RNA from different genetic
subtypes.
To determine to what extent AMPLICOR HIV-1 MONITOR Test
versions 1.0, 1.0+, and 1.5 were able to quantify HIV-1 RNA of various subtypes, we compared the viral loads obtained with the patient samples
with each version (Fig. 2 and
3). Figure 2 presents the individual
results obtained for all 96 samples; Fig. 3 presents the average
results obtained with each test version by subtype. A significant
increase in viral load of at least 1 order of magnitude was observed
for the subtype A- and E-infected samples with the version 1.0+ and 1.5 tests. For the subtype B-, C-, and D-infected samples, versions 1.0 and
1.0+ yielded equivalent results. The version 1.5 results for subtypes
B, C, and D were highly correlated to those for versions 1.0 and 1.0+,
but the loads were slightly higher. The results obtained with versions
1.5 and 1.0+ were very highly correlated for all subtypes, but the
loads obtained with version 1.5 were generally higher, by approximately
0.4 log10 HIV RNA copies/ml. For some subtype A-infected
samples the loads obtained with version 1.5 were more than 1 log10 HIV RNA copies/ml higher than those obtained with
version 1.0 (Fig. 2C).

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FIG. 2.
HIV loads in clinical samples with AMPLICOR HIV-1
MONITOR Test versions 1.0, 1.0+, and 1.5 and the prototype automated
test. The dotted lines indicate the upper limit of the linear range of
the tests, at 750,000 HIV RNA copies/ml. (A) Version 1.0+ compared to
version 1.0. (B) Version 1.5 compared to version 1.0. (C) Version 1.5 compared to version 1.0+. (D) Prototype automated test compared to
version 1.5. Data for the four samples in which HIV-1 RNA was not
detected by the prototype automated test were excluded from the linear
regression analysis in panel D. The different samples are represented
as follows: , subtype A (n = 55); , subtype B
(n = 9); , subtype C (n = 21); ,
subtype D (n = 2); , subtype E (n = 7); and , subtype G (n = 2).
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FIG. 3.
Average log10 HIV RNA copies per milliliter
for subtypes A, B, C, D, E, and G from clinical specimens. For subtypes
D, E, and G the results for individual samples are shown. For subtypes
A, B, and C, the brackets represent the 95% confidence interval of the
average. Only data for samples that were positive and below the upper
limit of all four versions (750,000 HIV RNA copies/ml) were included in
the figure. V, version.
|
|
As shown in Table 2, a similar trend was observed for the
quantification of HIV-1 RNA from the reference strains. Each test sample contained 20,000 virus particles per ml. Therefore, the expected
result was approximately 40,000 RNA copies per ml (or 4.6 log10 HIV RNA copies/ml). The overall mean viral loads
measured in the viral stocks were 4.124 ± 0.750, 4.725 ± 0.379, and 5.027 ± 0.350 log10 copies per ml
for the version 1.0, 1.0+, and 1.5 tests, respectively. The viral load
increased mainly for subtype A-, E-, and F-infected samples, with
increases of 1.89, 1.29, and 0.92 log10 copies/ml,
respectively, between version 1.0 and version 1.0+ of the test and with
2.63, 1.41, and 1.89 log10 increases observed between
version 1.0 and version 1.5 of the test. Only a small increase in viral
load was observed for subtype B-, C-, and D-infected samples.
Correlation between AMPLICOR HIV-1 MONITOR Test version 1.5 and the
prototype automated test.
HIV RNA was not detected by the
prototype automated test in four of the patient samples: one sample
each infected with subtypes A, B, C, and E. None of the four test
methods detected HIV RNA in the subtype B-infected sample, which was
from a patient receiving antiretroviral therapy (described above). The
subtype A-, C-, and E-infected samples had low but detectable viral
loads with version 1.5 of the test of 2,630, 294, and 499 HIV RNA
copies/ml, respectively.
The prototype automated test and version 1.5 yielded results that were
highly correlated for all subtypes, demonstrating that the correlation
does not depend on subtype (Fig. 2D and 3). The correlation
between the two tests was calculated by the method of Bland and Altman
(7) by plotting differences against the average (Fig.
4). The correlation coefficient is 0.05 (95% confidence interval,
0.18 to 0.28), and the high P
value (P = 0.655) indicates that the differences
observed between the two tests are not significant, independent from
the average. However, the loads obtained with the prototype automated
test were generally lower than those obtained with version 1.5 by
approximately 0.3 log10 HIV RNA copies/ml (from 0.24 to
0.38 log10 HIV RNA copies/ml) (Fig. 2D and 3).

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FIG. 4.
Comparison of AMPLICOR HIV-1 MONITOR Test version 1.5 (microwell plate) and the prototype automated version as described by
Bland and Altman (7). Only data for samples that were
positive and that had loads below the upper limit for all four versions
(750,000 HIV RNA copies/ml) were included in the figure. The broken
lines indicate the 95% confidence interval of the mean difference
between the two tests for each sample.
|
|
As observed for the plasma samples, a good correlation between the two
techniques was observed, with slightly higher viral loads for the
reference strains also being detected by version 1.5 compared to the
loads detected by the prototype automated test (Table 2).
Reproducibility.
A total of 10 test runs have been done by one
technician, and in each run, one high-positive and one low-positive
control and one negative control were included. The reproducibilities of the different test versions were measured by calculating the mean
and standard deviation from the values obtained for each of the
controls. In each run of the different tests all the positive controls
were positive and all the negative controls were negative. For the
low-positive control the values observed were as follows: 3.594 ± 0.18, 3.554 ± 0.18, 3.930 ± 0.16, and 3.735 ± 0.11 log10 copies/ml with versions 1.0, 1.0+, and 1.5 and
the prototype automated test, respectively; and for the high-positive
control the averages were 5.520 ± 0.12, 5.752 ± 0.15, 5.917 ± 0.12, and 5.762 ± 0.17 log10 copies/ml
for versions 1.0, 1.0+, and 1.5 and the prototype automated version, respectively.
 |
DISCUSSION |
Viral load in plasma is an essential marker for the prediction of
disease progression and assessment of the potential of therapeutic drugs and vaccines (41), and the quantification of HIV RNA
in plasma has become a main tool in predicting disease outcome and monitoring the efficacy of antiretroviral therapy in HIV-1-infected patients. However, the current AMPLICOR HIV-1 MONITOR Test is unable to
quantitate accurately the RNA of some non-B subtypes of HIV-1.
In this study we evaluated three versions of the AMPLICOR HIV-1 MONITOR
Test, version 1.0 (the current test), version 1.0+ (the current test
with an additional pair of PCR primers), and version 1.5 (an upgraded
test with new PCR primers), for their performance with group M subtypes
of HIV-1. We also evaluated a prototype automated test, in which
amplification and detection are automated on the COBAS AMPLICOR instrument.
Subtype A- and E-infected patient samples were poorly detected by the
version 1.0 test (66% [41 of 62] were positive). Detection of
subtype A- and E-infected samples was significantly improved with the
version 1.0+ and 1.5 tests (98% [61 of 62] and 100% [62 of 62],
respectively). Detection of subtype C-, D-, and G-infected samples was
equivalent with versions 1.0, 1.0+, and 1.5 of the test (96% [24 of
25], 100% [25 of 25], and 100% [25 of 25], respectively), as was
detection of subtype B-infected samples (89% [8 of 9] with all
three versions). One subtype B-infected patient sample was negative by
these three tests, but it came from a patient undergoing antiviral
treatment and for whom the viral culture from the corresponding PBMCs
remained negative, suggesting a very low viral load in this patient.
The version 1.0 test uses the PCR primers SK462 (upstream, sense
primer) and SK431 (downstream, antisense primer). Alignment of these
primers with HIV-1 gag sequences in GenBank shows that the
upstream primer (SK462) contains three to six mismatches with subtype A
sequences and that the downstream primer (SK431) contains a mismatch
two bases from the 3' end in many subtype A, F, and G isolates
(18). The presence of more than four mismatches at critical positions in a primer decreases the efficiency of the amplification (10). This decrease in efficiency can result
in decreases in viral load measurements of more than 10-fold. The lower
sensitivity for subtype A- and E-infected samples and the lower viral
load results for the detectable subtype A- and E-infected samples are
most likely explained by the mismatches with the primers. All the
subtype A-infected samples from Cameroon were from AIDS patients
receiving no antiretroviral treatment, but the viral loads obtained by
the version 1.0 test were lower than expected for such a population.
However, the viral loads in these patients observed by AMPLICOR HIV-1
MONITOR Test version 1.5 were similar to the viral loads expected in
subtype B-infected patients at terminal stages of the disease.
Plasma RNA levels obtained with version 1.0+ with the subtype A- and
E-infected samples were significantly greater than those obtained with
version 1.0 but were slightly less than those obtained with version
1.5. Version 1.0+ includes the downstream primer SK151. SK151 differs
from SK431 by one nucleotide, which improves the homology to all HIV-1
isolates. However, the mismatch with subtype A samples near the 3' end
is still present in SK151, which may explain the slightly lower results
for subtype A- and E-infected samples obtained with version 1.0+
compared to those obtained with version 1.5.
AMPLICOR HIV-1 MONITOR Test version 1.5 is able to detect and quantify
HIV-1 RNA from all the HIV-1 group M genetic subtypes. However, the
numbers of HIV-1 RNA copies per milliliter are slightly larger than
those determined by the viral particle count assay, suggesting that the
quantification of the viral load with this version could be slightly overestimated.
In this study we also evaluated a prototype automated test on the COBAS
AMPLICOR instrument. The prototype automated test uses the same
amplification reaction as version 1.5, except that the amplification
takes place in the COBAS instrument. The results with version 1.5 and
the prototype automated test were highly correlated; however, the
counts obtained with the automated test were generally 0.3 log10 lower than those obtained with version 1.5, and the
HIV-1 RNA in four samples with low viral loads with version 1.5 was not
detected with the automated test. The lower counts obtained with the
prototype automated test can be due to the difference in how the
amplicons are captured (microwells versus microbeads) or to the
detection reagents used in the prototype automated test. Evaluation of
the modified test is in progress at Roche Molecular Systems. However,
the counts obtained by the prototype automated test are very close to
the viral particle counts, and this result therefore makes us believe
that the automated test on the COBAS instrument may become the future
HIV-1 MONITOR test for the quantification of the viral load in plasma.
In conclusion, the new gag primers and other changes in
version 1.5 significantly improved the detection and quantification of
non-B subtypes of HIV-1 by the AMPLICOR HIV-1 MONITOR Test. This
improvement was especially observed for subtype A, E, G, and also F
strains, whereas previously, several studies reported difficulties in
the detection and quantification HIV-1 RNA from subtype A-, E-,
and G-infected samples (1, 12, 18, 25). All subtype E
strains are recombinant viruses with a gag region from
subtype A viruses; also, several subtype G viruses have been described
as recombinants with a subtype A gag region (11,
32). This new version permits the accurate measurement of viral
load for all group M subtypes tested and should therefore allow the accurate assessment of disease prognosis and response to antiretroviral treatment in patients infected with a group M subtype of HIV-1.
 |
ACKNOWLEDGMENTS |
We express our gratitude to Christian Laurent for help with the
statistical analysis.
This work was partially supported by a grant from the ANRS (Agence
National de Recherche sur le SIDA).
 |
FOOTNOTES |
*
Corresponding author. Mailing address: ORSTOM
Laboratoire Rétrovirus, 911 Ave. Agropolis, B.P. 5045, 34032 Montpellier Cedex 1, France. Phone: 33-4-6741-6297. Fax:
33-4-6761-9450. E-mail: triques{at}mpl.orstom.fr.
Present address: Department of Infectious Diseases, University of
Rochester Medical Center, Rochester, NY 14642.
 |
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