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Journal of Clinical Microbiology, October 1999, p. 3357-3361, Vol. 37, No. 10
0095-1137/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Molecular Characterization of a Shiga Toxigenic
Escherichia coli O113:H21 Strain Lacking eae
Responsible for a Cluster of Cases of Hemolytic-Uremic
Syndrome
Adrienne W.
Paton,1
Matthew C.
Woodrow,1
Robyn M.
Doyle,2
Janice A.
Lanser,2 and
James C.
Paton1,*
Molecular Microbiology Unit, Women's and
Children's Hospital, North Adelaide, S.A.
5006,1 and Division of Clinical
Microbiology, Institute of Medical and Veterinary Science, Adelaide,
S.A. 5000,2 Australia
Received 17 May 1999/Returned for modification 3 July 1999/Accepted 14 July 1999
 |
ABSTRACT |
Shiga toxigenic Escherichia coli (STEC) strains are a
diverse group of organisms capable of causing severe gastrointestinal disease in humans. Within the STEC family, certain strains appear to
have greater virulence for humans. STEC strains carrying
eae and belonging to serogroup O157 or O111 have been
responsible for the vast majority of outbreaks of STEC disease reported
to date. Here we describe a STEC O113:H21 strain lacking
eae that was responsible for a cluster of three cases of
hemolytic-uremic syndrome. This strain produces a single Stx2-related
toxin and adheres efficiently to Henle 407 cells.
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TEXT |
Shiga toxigenic Escherichia
coli (STEC) strains are an important cause of
gastrointestinal disease in humans, particularly since such infections
may result in life-threatening sequelae such as hemolytic-uremic
syndrome (HUS) and thrombotic thrombocytopenic purpura (11,
17, 26). It has been recognized for a number of years that STEC
strains causing human disease may belong to a very broad range of O
serogroups (11). However, a subset of these (notably O157
and O111) appear to be responsible for the majority of serious cases
(those complicated by HUS) (8, 11, 26). These STEC strains
have the capacity to produce attaching and effacing lesions on
intestinal mucosa, a property mediated by the eae gene
product intimin. Production of intimin is not essential for
pathogenesis, as a minority of sporadic cases of HUS are caused by STEC
strains lacking eae (26). However, all outbreaks
of STEC disease complicated by HUS reported to date have been caused by
STEC strains carrying eae and belonging to serogroup O157 or
O111 (26). We now describe an eae-lacking STEC
strain belonging to serotype O113:H21 that was responsible for a
cluster of cases of HUS in South Australia.
Examination of fecal culture extracts by multiplex PCR.
During
April 1998, three children with HUS were admitted to the Women's and
Children's Hospital, North Adelaide, S.A., Australia. Preliminary
screening of crude fecal culture extracts by PCR (22) indicated the presence of Shiga toxin gene (stx) sequences.
This screening PCR yields 212- and 215-bp amplicons in the presence of
genes encoding Shiga toxin type 1 or type 2 (stx1 or stx2), respectively (22). Further characterization was achieved by using two recently described multiplex PCR assays (19).
Assay 1 utilizes four PCR primer pairs and detects the presence of
stx1, stx2 (including
variants of stx2), eae, and
enterohemorrhagic E. coli (EHEC) hlyA
(which encodes a STEC-specific enterohemolysin), generating
amplification products of 180, 255, 384, and 534 bp, respectively. Assay 2 uses two primer pairs specific for portions of
the rfb (O-antigen-encoding) regions of E. coli
serotypes O157 and O111, generating PCR products of 259 and 406 bp,
respectively. The results obtained with assay 1 are shown in Fig.
1. Extracts from all three HUS patients
were positive for stx2 and EHEC hlyA only. The fact that the extracts were negative for eae was
unexpected, given that all previously reported HUS outbreaks have been
caused by eae-carrying STEC. When tested with assay 2, all
three samples were negative for rfbO157 or
rfbO111 sequences (result not shown), which
again was unexpected, as all previously reported outbreaks of HUS have
been caused by STEC strains belonging to serogroups O157 or O111.

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FIG. 1.
Multiplex PCR analysis of fecal cultures from HUS
patients and STEC isolates. Crude DNA extracts of broth cultures from
the indicated samples or strains were analyzed by multiplex PCR assay
1, as previously described (19). PCR products were
electrophoresed on 2% agarose gels and stained with ethidium bromide.
Lanes: M, DNA size markers (pUC19 DNA digested with HpaII;
fragment sizes visible are 501/489, 404, 331, 242, 190, and 147 bp); 1, negative control; 2, positive control (O111:H STEC strain
95NR1, which is positive for stx1,
stx2, eae, and EHEC hlyA);
3, fecal culture from HUS patient 1; 4, fecal culture from HUS patient
2; 5, fecal culture from HUS patient 3; 6, STEC isolate 98NK2; 7, STEC
isolate 98BN1. The expected mobilities for the various specific PCR
products are also indicated.
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Interestingly, a DNA extract from a fecal culture from a household
contact of patient 3 (an asymptomatic adult) also tested positive by
PCR for stx2 and EHEC hlyA. However,
extracts from fecal cultures from a sibling of patient 1 and the
parents of patient 2 were negative by PCR.
Isolation of the causative STEC strain(s).
In order to isolate
the causative STEC strain or strains, fecal samples from each patient
were plated on MacConkey agar. Colonies were picked and inoculated into
150 µl of Luria-Bertani (LB) broth (14) in 96-well
(U-bottomed) microtiter plates. Cell lysates were prepared, spotted
onto nylon filters (Hybond N+; Amersham), and probed with a
digoxigenin-labelled stx-specific probe, as described
previously (24). Approximately 20% (56 of 288) of the
colonies tested from patient 2, which yielded the strongest PCR signal,
were stx probe positive. However, no probe-positive isolates
were obtained after testing 480 colonies from each of the fecal samples
from patient 1 or patient 3. This was not unexpected, as the PCR signal
for both of these patients was much less intense than that for patient
2 (Fig. 1, lanes 3 and 5), suggesting the presence of very low numbers
of STEC. Interestingly however, 100% of 192 colonies tested from the
fecal sample from the household contact of Patient 3 were
stx positive. Representative STEC isolates from patient 2 and the contact of patient 3 were designated 98NK2 and 98BN1,
respectively. DNA extracts from these two isolates yielded a multiplex
PCR profile identical to that obtained for the fecal culture extracts
from the three HUS patients (Fig. 1, lanes 6 and 7). During previous
characterization of the multiplex PCR assay (19) with a
large collection of STEC isolates, we observed this particular profile
only in STEC strains belonging to serotype O113:H21. Accordingly, 98NK2
and 98BN1 were tested with O113- and H21-specific typing sera at
the Salmonella Reference Laboratory, Institute of Medical
and Veterinary Science, Adelaide, S.A., Australia; both isolates
were seropositive.
Serological analysis.
Most HUS patients exhibit a transient
serum antibody response to lipopolysaccharide (LPS) of the infecting
serotype, and so in cases where STEC have not been isolated from fecal
cultures, reliable etiological information can frequently be obtained
by serological analysis (3, 5, 26, 32). Accordingly,
convalescent-phase sera from all three HUS patients in the
present study were analysed by Western blotting for the presence
of O113-specific antibodies. Sera were also tested for
antibodies to O111 and O157 LPS, as STEC strains belonging to these
serogroups are the most common causes of HUS in Australia
(26). LPS was purified from STEC O113:H21,
O111:H
, and O157:H
according to the method
of Westphal and Jann (30), and aliquots were
subjected to sodium dodecyl sulfate-polyacrylamide gel
electrophoresis (SDS-PAGE) (12) and electrophoretically
transferred to nitrocellulose filters, as described by Towbin et al.
(28). Replicate filters were then reacted with
convalescent-phase patient serum (kindly provided by K. F. Jureidini and P. Henning, Renal Unit, Women's and Children's
Hospital) or serum from three healthy controls at a dilution of
1:1,000, followed by goat anti-human immunoglobulin G conjugated to
alkaline phosphatase (Bio-Rad Laboratories, Hercules, Calif.). Filters
were then developed with chromogenic substrate (4-nitroblue tetrazolium
and X-phosphate). All three HUS patient sera reacted with O113 LPS but
did not label either the O111 or the O157 LPS extracts (Fig.
2). None of the LPS extracts reacted with
the control sera (the result for one of these is also shown in Fig. 2).
These data, combined with the results of multiplex PCR analysis
of fecal cultures described above, are compelling evidence that all
three HUS patients were infected with STEC O113.

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FIG. 2.
Western immunoblot detection of anti-O113 LPS. Aliquots
of LPS purified from E. coli serogroups O113 (lanes 1), O111
(lanes 2), and O157 (lanes 3) were separated by SDS-PAGE, transferred
to nitrocellulose filters, and reacted with convalescent-phase sera
from the three HUS patients or serum from a healthy control.
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Genetic characterization of STEC isolates.
Although the STEC
O113:H21 isolates were negative by PCR for eae, it was
considered possible that such strains carry a variant eae
gene with sufficient sequence differences in the primer-specific region
to interfere with the efficiency of PCR. This was nonetheless thought
to be unlikely, since sequence variation in eae from diverse classes of pathogenic E. coli occurs principally in the 3'
portion of the gene (13, 29), and the PCR primers used in
the present study anneal to conserved sequences in the 5' region. As
additional confirmation, chromosomal DNA from 98NK2 and 98BN1 was
subjected to Southern hybridization analysis with a 3-kb probe prepared by PCR amplification of the complete eae gene from STEC
95SF2 (O157:H
) in the presence of digoxigenin-11-dUTP. No
hybridization was detected, even under low-stringency conditions
(result not shown).
To examine the relationship between the two STEC O113:H21 isolates
98NK2 and 98BN1, chromosomal DNA from these as well as
other STEC O113
strains in our collection was restricted with
EcoRI or
SphI and subjected to restriction fragment length
polymorphism
(RFLP) analysis with an
stx2-specific probe, as described previously
(
24) (Fig.
3). 98NK2 and 98BN1
both contained single
stx2 genes
on a 9.4-kb
EcoRI or 7.3-kb
SphI fragment. The other STEC
O113
strains tested had distinct RFLP patterns. DNA from 97MW1, which
was isolated in Adelaide, S.A., Australia, in 1997 from a patient
with
microangiopathic hemolytic anemia and thrombocytopenia, contained
two
stx2-reactive
EcoRI fragments (9.4 and 5.7 kb). However, three
reactive fragments were detected in
SphI digests (8.7, 7.3, and
5.5 kb), suggesting that this
strain contains three
stx2-related
genes. Strain
MW10, which was isolated from fermented sausage
in Adelaide in 1995, contains two
stx2-related genes located on
11.7- and 10.0-kb
EcoRI fragments (7.7- and 4.9-kb
SphI
fragments).
Strains 1183 and 3848, clinical isolates from New Zealand
(kindly
provided by Jenny Bennet), contained single
stx2-related genes
located on 10.0- and 9.4-kb
EcoRI fragments.

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FIG. 3.
RFLP analysis of STEC O113 isolates. Genomic DNA
purified from the indicated STEC strains was digested with
EcoRI (A) or SphI (B), electrophoresed, and
subjected to Southern hybridization analysis with an
stx2-specific DNA probe, as described previously
(24). Lanes: 1, 98NK2; 2, 98BN1; 3, 97MW1; 4, MW10; 5, 1183;
6, 3848. Lane M contains DNA size markers of 23.1, 9.4, 6.6, 4.4, 2.3, and 2.0 kb.
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The genetic relationships between the various STEC O113 strains were
also examined by pulsed-field gel electrophoresis (PFGE),
as described
previously (
24) (Fig.
4).
98NK2 and 98BN1 had indistinguishable
PFGE patterns. The overall PFGE
pattern for the other Adelaide
clinical isolate, 97MW1, was similar but
not identical; there
were differences in at least four DNA fragments.
The PFGE patterns
for the food isolate MW10 and the two clinical
isolates from New
Zealand were all quite distinct. These findings are
consistent
with the RFLP analysis and collectively support the
conclusion
that 98NK2 and 98BN1 are representatives of the same STEC
O113:H21
clone.

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FIG. 4.
Pulsed-field gel electrophoresis of
XbaI-digested genomic DNA of STEC O113. Lanes 1 to 6 are
labelled as for Fig. 3. The lanes marked M contain marker DNA
(SmaI-digested genomic DNA of Staphylococcus
aureus NCTC8325).
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Analysis of the O113:H21 gene encoding Stx2.
In order to
characterize the Stx2 protein produced by 98NK2, the complete
stx2 operon was amplified by PCR with previously described primers (23). Amplification was carried out using the Expand High Fidelity PCR System (Boehringer Mannheim) under conditions recommended by the manufacturer. The resultant
1,495-bp PCR product was cloned into pBluescript (Stratagene, La Jolla, Calif.) and transformed into E. coli JM109
(33). Both strands of the insert were then sequenced by
using dye terminator chemistry and custom-made primers on an ABI model
373A automated DNA sequencer. The deduced amino acid sequences of the A
and B subunits of Stx2 produced by 98NK2 (designated
Stx2O113) aligned with those for classical Stx2
(10) and the subtypes Stx2c (27) and Stx2d (9) are shown in Fig. 5.
Although Stx2O113 has three amino acid differences in the A
subunit with respect to classical Stx2, it clearly belongs to this
subtype, as it lacks the specific A subunit amino acid substitutions at
the C terminus (S291 and E297) that are associated with Stx2d
(15, 16). The B subunit of Stx2O113
differs from that of classical Stx2 by a single residue in the signal
peptide. It does not contain the specific D16
N substitution
associated with the Stx2c and Stx2d subtypes.

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FIG. 5.
Deduced amino acid sequences of the A and B subunits of
Stx2O113 aligned with published sequences for Stx2
(10), Stx2c (27), and Stx2d (9). Dots
denote residues identical to Stx2O113; the dash denotes an
absent residue. Arrows indicate the first residue of the mature
polypeptide for each subunit.
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Epithelial cell adherence.
The adherence of 98NK2 and the O113
food isolate MW10 to human intestinal epithelial (Henle 407) cells was
compared with that of 95NR1, an eae-carrying STEC
O111:H
strain responsible for a large food-borne outbreak
of HUS in Adelaide in 1995 (24), as previously described
(25). E. coli cells were grown overnight at
37°C in LB broth and diluted to a density of 104 CFU/ml
(confirmed by viable count) in Dulbecco's modified Eagle's medium
buffered with 20 mM HEPES and supplemented with 10% fetal calf serum
and 2 mM L-glutamine. Washed Henle 407 monolayers in 24-well tissue culture plates were then infected with 1-ml aliquots of
bacterial suspension. After incubation at 37°C for 3 h, the culture medium was removed and the monolayers were washed four times
with phosphate-buffered saline to remove nonadherent bacteria. The cell
monolayers were then detached from the plate by treatment with 100 µl
of 0.25% trypsin-0.02% EDTA. Cells were then lysed by addition of
400 µl of 0.025% Triton X-100, and 50-µl aliquots (and serial
10-fold dilutions thereof) were plated on LB agar to determine the
total number of adherent bacteria. Under these conditions, total
adherence (mean ± standard error of quadruplicate assays) of
95NR1 was (8.85 ± 0.46) × 104 CFU per well.
Total adherence for 98NK2 was (7.32 ± 0.20) × 104 CFU per well, which is 83% of that for the STEC O111
strain. In contrast, adherence of the food isolate MW10 was markedly
lower, at only (3.45 ± 0.49) × 104 CFU per well
(39 and 47% of that for 95NR1 and 98NK2, respectively).
Discussion and conclusions.
Although a wide variety of STEC
serogroups have been associated with human disease, O157 strains are
the predominant causes of disease in many parts of the world. The
dominance of these strains is even more marked when one considers those
responsible for outbreaks of STEC disease which include cases
complicated by HUS. Indeed, only a small number of HUS outbreaks due to
non-O157 STEC have been reported to date, all of which were caused
principally by STEC strains belonging to serogroup O111 (1, 4, 5, 24). Like STEC O157, these strains are positive for
eae. An eae-lacking STEC strain belonging to
serotype O104:H21 was responsible for an outbreak of diarrheal disease
in Montana in 1994, but none of the infected persons developed HUS
(6).
In the present study, we have provided molecular microbiological
evidence that an
eae-lacking STEC strain belonging to
serogroup
O113 was responsible for a cluster of three cases of HUS.
Multiplex
PCR analysis of fecal culture extracts from the three HUS
patients
yielded identical patterns (
stx1
negative,
stx2 positive,
eae negative, EHEC
hlyA positive,
rfbO111
negative,
rfbO157 negative),
which also agreed
with those obtained when DNA from the STEC O113:H21
isolates from
patient 2 and a household contact of patient 3 were
tested.
Furthermore, all three HUS patients had serological evidence
of
infection due to
E. coli O113. The possibility that these
patients
had been coinfected with an
eae-carrying STEC
strain is extremely
remote, given the fact that none of the primary
fecal cultures
were positive for
eae by PCR. Moreover, these
fecal cultures were
also negative for
rfbO111
and
rfbO157 by PCR, and O111- or O157-specific
antibodies were not detected in convalescent-phase
sera.
We recently cloned and sequenced the entire
rfb locus of
E. coli O113 (
20), and we have used this
information to design
a PCR assay specific for this serogroup
(
21). In an attempt
to obtain additional confirmation that
all three HUS patients
described in the present study were infected
with a STEC O113
strain, we tested crude DNA extracts from the original
fecal cultures.
Even though these had been stored at 4°C for
approximately 1 year,
an O113-specific PCR product was observed in
extracts from patient
1 and patient 2 (
21); unfortunately,
the extract from patient
3 was negative. However, the latter extract
was also negative
when retested for
stx2 and
EHEC
hlyA, suggesting that it had deteriorated
during
prolonged
storage.
The inability to isolate STEC O113 from HUS patients 1 and 3 is
undoubtedly a consequence of the fact that the numbers of
STEC
organisms in the gut often decrease rapidly as disease progresses
(
26). The fecal samples from these two patients were
collected
after HUS had developed. On the other hand, the fecal sample
from
HUS patient 2 which yielded 98NK2 was collected during the
diarrheal
prodrome, about 5 days before the onset of HUS
symptoms.
In the present study, the O113:H21 isolates 98NK2 and 98BN1 were
genetically indistinguishable, as judged by RFLP and PFGE
analysis.
This is not a consequence of lack of diversity among
STEC O113 clones,
as the RFLP and PFGE patterns for other such
strains in our collection
were different, both from 98NK2/98BN1
and from each other. Thus, it
appears that patient 2 and the contact
of patient 3 were infected with
the same STEC clone. It is reasonable
to conclude by inference that
patient 3 was also infected with
this O113:H21 strain. However,
notwithstanding the clustering
of the three HUS cases (dates of
presentation fell within a 20-day
period) and the convincing molecular
and serological evidence
that a STEC O113 strain was responsible, the
possibility that
patient 1 represented a sporadic case caused by a
distinct STEC
O113 strain cannot be eliminated, as no isolate was
obtained for
RFLP or PFGE analysis. Such a coincidence would be highly
improbable,
given that until the present cluster of HUS cases, there
had been
only one culture-proven case of human infection with a STEC
O113
strain in South Australia (strain 97MW1 was isolated from this
patient). An extensive epidemiological investigation did not identify
a
clear link between any of the HUS cases, and testing of a range
of
foods from the homes of the patients by
stx-specific PCR
also
failed to detect any positive
samples.
STEC strains which carry
eae are generally considered to
have higher virulence for humans than those which lack
eae
(
2,
31). However, a minority of sporadic cases of HUS are
caused
by
eae-lacking STEC strains, and the findings of the
present study
indicate that such strains are capable of causing HUS
outbreaks.
Melton-Celsa and colleagues (
15,
16) have
demonstrated that
certain
eae-lacking STEC strains produce a
variant form of Stx2
(designated Stx2d) which, unlike other members of
the Stx family,
is activated by intestinal mucus. This property was
found to be
associated with specific amino acids at the C terminus of
the
A subunit of Stx2d, notably S291 and E297. Those authors suggested
that production of an activatable toxin might compensate for the
lack
of
eae, as strains producing Stx2d were extremely virulent
for streptomycin-treated mice. However, the STEC O113:H21 strain
isolated in the present study has a single toxin gene encoding
a member
of the classical Stx2 subtype. Interestingly, Stx2
O113 is
identical to the Stx2-related toxin produced by an
eae-lacking
STEC O48:H21 strain, 94CR, which we isolated
previously from a
sporadic case of HUS (
18). Although the
activatable Stx2d toxins
have so far been detected only in
eae-lacking STEC strains (
16),
it is now clear
that this property is not essential for such strains
to cause
life-threatening human
disease.
Although production of Stx is a sine qua non of virulence, capacity to
adhere to the intestinal epithelium and colonize the
gut undoubtedly
plays an important role in the pathogenesis of
human STEC disease
(
17,
26). We have previously shown that
STEC isolates from
HUS cases have an enhanced capacity to adhere
to Henle 407 cells
relative to isolates from nonhuman sources
(
25). Similarly,
in the present study, 98NK2 exhibited twice
the level of adherence to
this cell line than did the STEC O113
strain (MW10) which was isolated
from a food source. Although
not directly compared in the present
study, 98NK2 and the O48:H21
strain 94CR (
25) exhibit
similar degrees of adherence relative
to a reference
O111:H

STEC strain. In spite of the absence of
eae, and by inference
the inability to adhere intimately to
enterocytes, the STEC O113:H21
strain associated with this cluster of
HUS cases is clearly capable
of efficient colonization of the human
gut. This is demonstrated
by the fact that the fecal sample from the
asymptomatic family
contact of HUS patient 3 yielded a virtually pure
culture of 98BN1
on MacConkey agar. However, the precise bacterial
factor(s) mediating
adherence of
eae-lacking STEC is yet to
be characterized. Dytoc
et al. (
7) have previously studied
the adhesion phenotype of
an
eae-lacking STEC O113:H21
strain. This strain was reported
to be piliated, and it adhered to
rabbit ileal brush border membranes
and to both Hep-2 and Henle 407 cells in a diffuse pattern. Interestingly,
it was capable of
microvillus effacement in vivo, although it
did not cause the
cytoskeletal rearrangements and intimate attaching
and effacing lesions
typical of STEC strains carrying
eae.
There have been a number of reports of sporadic cases of HUS being
caused by O113:H21 and other
eae-lacking STEC strains
(
11,
26). However, to our knowledge, this is the first
report of
a cluster of HUS cases caused by such a strain.
Although historically
less common, the severity of disease caused
by these strains may
be no less than that caused by recognized
"enterohemorrhagic"
STEC serogroups such as O157 and O111.
More widespread use of
PCR- or enzyme-linked immunosorbent
assay-based screening tests
for the presence of STEC of any serogroup
in fecal samples will
undoubtedly result in increased detection of
similar non-O157
outbreaks in the future. This will provide more
accurate data
on the etiology of human STEC
disease.
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ACKNOWLEDGMENTS |
We are grateful to Milka Karna-Marelj for serotyping of E. coli isolates and to Rolf Wise for assistance with imaging of PFGE gels. We are particularly grateful to Rod Givney for providing epidemiological information and to Fred Jureidini and Paul Henning for
providing convalescent-phase sera. We also thank Jenny Bennett for
providing New Zealand STEC O113 isolates.
This work was supported by a grant from the National Health and Medical
Research Council of Australia.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Molecular
Microbiology Unit, Women's and Children's Hospital, North Adelaide,
S.A. 5006, Australia. Phone: 61-8-8204 6302. Fax: 61-8-8204 6051. E-mail: patonj{at}wch.sa.gov.au.
 |
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