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Journal of Clinical Microbiology, June 1999, p. 1721-1726, Vol. 37, No. 6
0095-1137/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Incidence of Upper Respiratory Tract
Mycoplasma pneumoniae Infections among Outpatients in
Rhône-Alpes, France, during Five Successive Winter
Periods
Marie-Paule
Layani-Milon,*
Isabelle
Gras,
Martine
Valette,
Jacques
Luciani,
Jean
Stagnara,
Michèle
Aymard, and
Bruno
Lina
Laboratoire de Virologie du CHU et Groupe
Régional d'Observation de la Grippe Rhône-Alpes,
Hospices Civils de Lyon, Domaine Rockefeller, 69373 Lyon Cedex 08, France
Received 26 August 1998/Returned for modification 7 October
1998/Accepted 23 February 1999
 |
ABSTRACT |
In this prospective study, nasal swab samples from patients with
acute respiratory infections were evaluated for the presence of
Mycoplasma pneumoniae. This PCR-plus-hybridization-based
detection was associated with the detection of other viral agents.
During the five winter surveillance periods, 3,897 samples were
collected by 75 medical practitioners participating in the Groupe
Régional d'Observation de la Grippe surveillance network in
Rhône-Alpes (France). M. pneumoniae was detected in
283 samples (7.3%); its rate of detection ranged from 10.1 to 2.0%
over the five periods, and it was the second most frequently isolated
pathogen during the survey, after influenza A. Three high-prevalence
winters were observed, yielding an early winter peak of M. pneumoniae infection which was observed in all age groups. No
statistically significant difference was detected between rates of
infections in the different age groups, but M. pneumoniae
infection was significantly related to lower respiratory tract
infection during periods of high prevalence. This study defined the
frequency of M. pneumoniae detection from nasal swab
specimens in patients with acute respiratory infections, confirming its
high prevalence and the presence of large outbreaks due to this pathogen.
 |
INTRODUCTION |
Mycoplasma pneumoniae is
a common respiratory pathogen, found mainly during fall and winter
(9), that is responsible for mild acute respiratory
infections (ARIs) such as sore throats, pharyngitis, rhinitis, and
tracheobronchitis (2). Apart from the seasonal variation,
epidemic peaks of M. pneumoniae infections have been
observed in some countries about every 4 to 7 years (6, 14).
Besides mild infections, M. pneumoniae is also a causative
agent of atypical pneumonia resistant to
-lactam therapy. Rapid diagnosis procedures are required to diagnose severe pneumonia due to
this pathogen in order to implement appropriate therapy. This diagnosis
used to rely on culture, a time-consuming and relatively insensitive
technique, and serological methods, which are also insensitive and give
only a retrospective diagnosis (11, 20). The lack of
convenient classical methods led to the development of alternative
rapid tests such as antigen detection, hybridization with DNA probes,
and genomic amplification by PCR (3). Among these, PCR has
shown to be promising because of its sensitivity and specificity
(3, 7, 13, 25). Several procedures for sample preparation
and different primer sets have already been described (4, 21,
26).
The development of these rapid and accurate techniques means that they
can also be of help in estimating the frequency of M. pneumoniae mild upper respiratory tract infections occurring in
outpatients, as well as for the monitoring of possible M. pneumoniae epidemics (1, 13).
In France, detection and monitoring of influenza virus outbreaks are
performed each year by the Groupe Régional d'Observation de la
Grippe (GROG) surveillance network. This network was implemented in
1987 in different regions of France in accordance with World Health
Organization guidelines. Every year, virological surveillance of
influenza outbreaks is performed by nasal swab specimen collection by
volunteer general practitioners and pediatricians from outpatients presenting with clinical signs and symptoms suggestive of viral ARI
(17, 19). The swab samples that are sent to the laboratory and analyzed for the presence of influenza viruses are also processed for the detection of other microorganisms (19). Since winter 1992, M. pneumoniae has been systematically sought by PCR in
each swab received through the GROG network of Rhône-Alpes (France).
Here we present the results of a five-winter surveillance (i) to
analyze the overall incidence of respiratory M. pneumoniae infections occurring in outpatients presenting with ARI, (ii) to
characterize the form and frequency of M. pneumoniae
epidemics among years, and (iii) to analyze the frequency of M. pneumoniae infections in different age groups and compare the
infection rates with those due to respiratory viral pathogens.
 |
MATERIALS AND METHODS |
Nasal swab samples from patients.
Volunteer general
practitioners and pediatricians (55 and 20, respectively) located in
different areas of the Rhône-Alpes region of France (5.4 million
inhabitants) were included in the network and performed the sampling.
This network represents approximately 1% of the medical practitioners
in the region. The study periods were (i) between week 40 of 1992 and
week 13 of 1993, (ii) between week 42 of 1993 and week 16 of 1994, (iii) between week 40 of 1994 and week 11 of 1995, between week 41 of
1995 and week 12 of 1996, and between week 40 of 1996 and week 13 of 1997.
During these five winters, a total of 3,897 nasal swabs were sent to
the National Influenza Center in the Reference Laboratory of Virology
in Lyon (average, 37.8 per week; range, 1 to 157 per week). Some
samples were hand carried to the laboratory, and some were sent to the
laboratory by mail. Mailed samples were Virocult swabs kept in
transport medium to ensure the viability of the viruses
(15).
The only criterion for the enrollment of a patient was the presence of
an ARI with clinical signs and symptoms suggestive of influenza (fever
of over 38°C plus one respiratory symptom including cough, sore
throat, or nasal symptoms plus one constitutional symptom including
headache, myalgias, chills, or fatigue). The specimens were
systematically sent in with a completed, standardized questionnaire
including patient demographics, time of onset of symptoms, temperature,
clinical symptoms, physical findings, influenza vaccination status, and
the presence of other similar cases of illness in the family or in
contact persons.
Sample preparation for M. pneumoniae detection by
PCR.
Detection of M. pneumoniae by PCR was
systematically performed for each swab. Briefly, at arrival in the
laboratory, the swab was removed from the transport tube and its
content were expressed in a sterile glass tube containing 2.5 ml of
Eagle's minimum essential medium (Biowhittaker, Verviers, Belgium);
the transport medium was also added. The tube was vigorously agitated
with a vortex mixer, and 300 µl of this mixture was subsequently used
for PCR. The remaining volume was used for virus detection.
The 300-µl aliquot was centrifuged at 14,000 × g for
20 min. The supernatant was discarded, and the pellet was resuspended in 100 µl of lysis buffer (10 mM Tris HCl [pH 8], 1 mM EDTA, 0.1% Triton X-100 [Sigma], 100 µg of proteinase K/ml [Boehringer
Mannheim]). The mixture was incubated for 30 min at 55°C and then
for 10 min at 95°C. The sample was then ready for PCR or could be
frozen and stored for later use.
PCR amplification.
For M. pneumoniae-specific
amplification, we used primers MPP11 (5'TGCCATCAACCCGCGCTTAAC)
and MPP12 (5'CCTTTGCAACTGCTATAGTA) (purchased from
Eurogentec) (7). The target sequence for amplification was a
466-bp segment of the gene coding for the P1 cytadhesin protein. The
final volume of the PCR mixture was 50 µl, and it contained 10 µl
of the extracted solution described above; 0.5 µM each primer; 200 µM each dATP, dCTP, dTTP (Eurogentec), and dGTP, 50 mM KCl, 10 mM
Tris HCl (pH 9); 1.5 mM MgCl2; 0.1% (vol/vol) Triton
X-100; and 1 U of Taq DNA polymerase (Promega, Madison, Wis.). The reaction was performed in a 96-well microplate
(Thermowell-H; Costar, Cambridge, Mass.) placed in a thermocycler
(Omnigene; Hybaid). PCR runs consisted of a denaturation step of 95°C
for 3 min, followed by 36 cycles of amplification, each consisting of
95°C for 1 min, 55°C for 1 min, and 72°C for 1 min. A final elongation step of 5 min at 72°C was done to ensure that the
polymerization of every amplified fragment was completed. A positive
control (M. pneumoniae FH) and negative controls (water,
DNA-free extraction mixture, and DNA-free PCR mixture) were
systematically run in parallel.
Analysis of amplified samples.
The PCR products were
analyzed on a 1.5% (wt/vol) agarose gel (Seakem GTG; FMC, Rockland,
Maine). Electrophoresis was run in 1× Tris-borate-EDTA (Sigma) and
followed by ethidium bromide staining. Colored gels were photographed
under UV light by using an MP4+ Polaroid camera.
Dot blot hybridization in the winters of 1992-1993 and
1993-1994.
The dot blot hybridization assay is considered a
reference method for the detection of amplified M. pneumoniae DNA (12). Briefly, 10 µl of the amplified
product was applied to a prewetted (10× SSC [1× SSC is 0.15 M NaCl
plus 0.015 sodium citrate]), positively charged nylon membrane (Hybond
N+; Amersham) by using a dot blot manifold (Bio-Rad). The samples were
immobilized and denatured on the nylon membrane by UV irradiation. The
membrane was prehybridized for 30 min at 53°C with
1-ml/cm2 1% blocking buffer (Amersham) in 10 mM maleic
acid-15 mM NaCl (pH 7.5). Fluorescein-labeled probe MP-I (5' CAA ACC
GGG CAG ATC ACC TTT; Eurogentec) was added to a concentration of 500 pM
to the hybridization solution (5× SSC, 0.1%
N-lauroylsarcosine [Sigma], 0.02% sodium dodecyl sulfate,
5% blocking reagent), and hybridization was performed at 53°C. After
45 min of incubation, three washes were done in 1× SSC-1% sodium
dodecyl sulfate for 5 min each at 53°C, followed by one wash with 1×
SSC. The fluorescein-labeled hybrid was detected immunologically. The
detection system used a chemiluminescence assay (Boehringer Mannheim).
The bound DNA probe was visualized after incubation for 15 min to
overnight at 37°C in the dark.
Detection of amplified DNA by DEIA since the winter of
1994-1995.
The Gen-Eti-K-DNA enzyme immunoassay (DEIA; DiaSorin)
is based on the immobilization of a capture probe-amplification product hybrid on a solid phase by using a biotin-avidin bridge
(23). DNA duplexes are detected by an anti-DNA mouse
monoclonal antibody that specifically reacts with double-stranded DNA
(dsDNA) but not with single-stranded DNA. The specific ds-DNA-anti-DNA
antibody complexes are visualized by a peroxidase-conjugated anti-mouse antibody and a chromogen-substrate mixture. The detection of amplified M. pneumoniae DNA with the DEIA was carried out in
accordance with the manufacturer's recommendations. Avidin-coated
plates were incubated overnight at 4°C with 50 ng of biotinylated
oligonucleotide probe MP-I per well. Wells were washed five times with
300 µl of washing solution. Twenty microliters of the sample was
denatured by incubation for 10 min at 96°C and then quickly cooled on
ice. The sample was incubated with 100 µl of hybridization buffer at 50°C for 60 min on a heating block (Microelisa System; Organon Teknika). After five washes done as described above, 100 µl of the
anti-dsDNA antibody diluted 1:50 was added and the mixture was
incubated for 60 min at room temperature. After a new washing procedure, bound anti-dsDNA antibody was detected by adding 100 µl of
horseradish peroxidase linked to rabbit anti-mouse immunoglobulin G. Following 60 min of incubation at room temperature and five washes, 100 µl of chromogen substrate mixture was added. The colorimetric reaction was allowed to develop for 30 min in the dark at room temperature prior to being stopped with 200 µl of 1 N sulfuric acid.
A450 and A630 were
determined with a microtiter plate reader. The
A630 was subtracted from the
A450. The DEIA cutoff value was calculated as
the mean value of all negative controls plus 0.2 absorbance unit,
providing a cutoff value of 0.25 to 0.30 absorbance unit.
Detection of other infectious agents.
As the samples were
collected by the GROG network, implemented for the detection and
monitoring of influenza epidemics, detection and/or inoculation onto
tissue cell culture were systematically performed for the diagnosis of
influenza A and B viruses as previously described (18). The
swabs were also systematically processed to detect other viruses, such
as respiratory syncytial virus (RSV), coronavirus, rhinovirus, and
parainfluenza virus, as previously described (19).
Statistical analysis.
Statistical analysis was performed by
using a chi-square test and multivariate analysis for determination of
odds ratios (ORs) and relative risks (RRs). Estimation of impact was
based on the facts that GROG practitioners represent 1% of the
practitioners in the region and that they sample approximately 2% of
their patients presenting with ARI.
 |
RESULTS |
Frequency of detection of M. pneumoniae and other
pathogens.
Practitioners in the network have collected swabs from
an average of 1.8% (1 of 55) of their patients presenting with
influenza-like illnesses (ILIs) (range, 1.2 to 2.5%). Among the 3,897 nasal swabs collected, 283 (7.6%) were positive for M. pneumoniae by PCR. Over the five periods of surveillance,
different rates of detection were recorded (97 of 959 [10.1%] in
1992-1993, 67 of 690 [9.7%] in 1993-1994, 81 of 933 [8.7%] in
1994-1995, 15 of 766 [2.0%] in 1995-1996, and 23 of 549 [4.2%] in
1996-1997.
Apart from M. pneumoniae, other etiologic agents responsible
for respiratory tract infections were also identified. The frequency of
detection of respiratory pathogens varied from year to year as shown in
Table 1. Mixed infections combining
M. pneumoniae and a viral agent (influenza A or B virus or
RSV) were also recorded every year (Table
2).
The distribution of the pathogens changed during the 5-year
surveillance; M. pneumoniae ranked first to fifth in
frequency of detection among samples. After influenza A virus, M. pneumoniae was the second most frequent pathogen detected during
this 5-year survey. The annual impact of M. pneumoniae
measured during the 6-month surveillance ranged from 1,234 cases/100,000 inhabitants during the 1994-1995 surveillance to 190 cases/100,000 inhabitants during the 1995-1996 surveillance.
Seasonal distribution.
Every year, at least one peak of
M. pneumoniae infection was observed during late autumn
(October to December), and it was variable in duration and intensity,
as summarized in Fig. 1 and 2. During the winter 1992-1993 surveillance, a second peak was observed. During the first three
winters of the study, M. pneumoniae was frequently detected,
accounting for approximately 25% of the pathogens detected (Table 1)
and up to 50% of the positive nasal swabs processed during M. pneumoniae peaks. During these peaks, no other viral pathogen was
detected in more than 10% of the samples. On the other hand, during
the winter of 1995-1996, only 18 swabs were positive, reflecting a very
low rate of diffusion.

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FIG. 1.
Seasonal distribution of collected specimens (curves)
and samples positive for M. pneumoniae (bars). The
surveillance was stopped between weeks 14 and 40 of each year.
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FIG. 2.
Seasonal distribution of samples positive for M. pneumoniae ( ), RSV (----), influenza
B virus (... ...), and mixed infections due to M. pneumoniae and RSV ( ) and M. pneumoniae and
influenza B virus ( ) during the winter 1992-1993 surveillance.
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As a global viral surveillance was performed at the same time, various
viruses were detected or isolated from GROG swabs. Every year, the
influenza epidemic was monitored and other virus-related epidemics were
recorded (data not shown).
Age distribution.
The age distribution of M. pneumoniae infections is presented in Table
3. These infections were detected in all
age groups. No statistically significant difference was observed
between rates of detection in the different age groups, including the
<4-year-old group that represented a large number of samples
(P > 0.05; OR < 0.5).
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TABLE 3.
Distribution of samples collected and samples positive
for M. pneumoniae over the five periods of surveillance and
among age groups
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|
Clinical presentation.
During the three winters with a high
prevalence of M. pneumoniae (1992 to 1994) and whatever the
age group, the lower respiratory tract infection (LRTI) syndrome was
significantly associated with M. pneumoniae (P < 0.0001; OR > 3, RR > 2). However, during the winters with a low
prevalence of M. pneumoniae (1995 to 1997), no difference
was observed between clinical signs of LRTI recorded from M. pneumoniae-infected patients and patients infected with other
agents (P > 0.05; OR = 0.58; Table
4).
 |
DISCUSSION |
In our study, M. pneumoniae was the second most
frequent cause of respiratory tract infection in all age groups of
outpatients, with a calculated impact reaching 1,234 cases per 100,000 inhabitants during the winter of 1994-1995. This result is in agreement
with previously reported studies (2, 10, 11). This high
prevalence was certainly due to the use of a reliable, sensitive
detection technique; PCR has proved its usefulness for accurate
diagnosis and is now accepted as a clinically useful technique
(18). Our study also confirmed that M. pneumoniae
can be responsible for epidemics. During our survey, it was detected in
up to 50% of the swabs sampled from patients presenting with ARI in a
given period (Fig. 1). Even if M. pneumoniae infection
provoked various clinical presentations, LRTIs were more frequently
observed in patients infected with M. pneumoniae (Table 4).
This was previously observed in a study conducted in a pediatric
practice (5). The various presentations of M. pneumoniae infection might be a consequence of a bias due to the
recruitment of patients. These were included since they presented with
ARI, a nonspecific syndrome that suggests an influenza ARI, as well as
those due to other respiratory pathogens (16). On the other
hand, since the major aim of the GROG network is to detect the onsets
of influenza epidemics, practitioners are keen to collect samples from
patients with an identical presentation, regardless of specific ILI
criteria (one symptom may be lacking). This behavior encouraged
detection of epidemics due to any specific pathogen and facilitated the
surveillance for respiratory tract infections, as we have shown in our
previously published study (19).
The high rate of detection of M. pneumoniae during the first
three winters raised the question of the pathogenicity of the strains
detected. The dramatic drop in its detection observed during the last 2 years of the surveillance (Table 1) suggests that the detection of
M. pneumoniae observed in previous years was directly
correlated with its epidemiological pattern among positive patients,
i.e., sporadic circulation versus epidemic events (1).
Moreover, the low incidence correlated with the lack of specific
association with LRTI as observed during high-incidence periods (Table
4).
According to Jacobs (14), M. pneumoniae strains
can be divided into two groups (groups 1 and 2) with different
adherence abilities; the immune response lacks adherence-inhibiting
antibodies during M. pneumoniae group 2 infection. Jacobs
suggested that group 1 M. pneumoniae strains are more likely
to develop epidemics. Since our PCR cannot type the strains, we are
unable to confirm this finding.
Possible M. pneumoniae carriage has been suggested by
several authors (4, 9, 11, 18). Among them, Foy
(9) reported that M. pneumoniae was recovered by
culture from throat samples up to 4 months after illness. It has been
suggested that a quantitative PCR assay technique would be useful in
determining the number of DNA copies (or the equivalent number of CFU
per milliliter) of M. pneumoniae in positive patients; the
determination of a threshold in this quantitative assay could then
differentiate between putative carriers and patients with M. pneumoniae-related respiratory tract infections (4,
18). This approach has been developed by Williamson et al.
(27). They suggested that the threshold is 104
DNA copies per ml (equivalent to 103 CFU/ml) of throat
washing (2 to 5 ml). Beyond this value, all patients were unequivocally
infected with M. pneumoniae. Gnarpe et al. (11)
detected M. pneumoniae in up to 13.5% of the throat samples
from a healthy population. They concluded that M. pneumoniae is a common finding in the general population and that the rate of
detection varies greatly from one period to another. As the sensitivity
of our PCR assay is approximately 102 CFU/ml (unpublished
data), we may have detected nonpathogenic strains collected from
carriers. This detection of nonpathogenic M. pneumoniae
strains may have occurred during low-prevalence years, explaining the
lack of association with LRTI, as observed during years of high
prevalence. According to our results, it is likely that M. pneumoniae may be isolated or detected in patients with no
evidence of disease. The use of a quantitative PCR assay will help us
to learn more about the carrier state (9). In studies
recruiting patients presenting with mild infections such as the common
cold (22), the prevalence of M. pneumoniae was low (2%). This is in accordance with our results and suggests that
M. pneumoniae is not a causative agent of such mild
diseases. The 2% detection rate might just reflect the percentage of
healthy carriers.
In some of the cases in our study, M. pneumoniae coinfected
with viral strains (influenza A or B virus or RSV). These mixed infections were not severe but were responsible for specific clinical presentations such as otitis in children (13). During the
1992-1993 surveillance, two peaks of M. pneumoniae infection
were recorded. These coincided with two viral epidemics (RSV and
influenza B virus). The mixed infections were recorded during the
coincident peaks, indicating cocirculation of the strains (Fig. 2).
This strongly suggests that M. pneumoniae can superinfect
patients presenting with viral infections, either in the early stage of infection (the first 3 days) or in the late stage during the recovery of respiratory cells. During the surveillance, the rate of infection varied with the year. This variation was related neither to the rate of
detection of other pathogens nor to any specific climatic changes. Such
dramatic changes, which have already been observed by others, suggest
cycles of M. pneumoniae epidemics (8, 14, 24).
The high rate observed during the winter of 1992-1993 was also reported
in Poland by Rastawicki et al. (24).
This analysis of outpatients infected with M. pneumoniae
emphasizes its pathogenic role but revealed no specific sign or
symptoms. M. pneumoniae was responsible for
rhinopharyngitis, bronchitis, and otitis. These symptoms were observed
in the different age groups, unlike in previous studies (8).
Interestingly, no specific increase in severe atypical pneumonia was
observed during winters with a high prevalence of M. pneumoniae infection.
M. pneumoniae is a frequent pathogen in upper respiratory
tract infection, and since it can be cured by appropriate therapy, its
detection should be systematically performed in patients presenting with ARI.
 |
ACKNOWLEDGMENTS |
We are grateful to all of the general practitioners and
pediatricians participating in the GROG Rhône-Alpes network;
without them, this work would have been impossible. Thanks to
François Chappuis for his help with the statistical analysis.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Laboratoire de
Virologie, Hospices Civils de Lyon, Domaine Rockefeller, 8 avenue
Rockefeller, 69373 Lyon Cedex 08, France. Phone: 33 478 77 70 29. Fax:
33 478 01 48 87. E-mail:
layani{at}rockefeller.univ-lyon1.fr.
 |
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Journal of Clinical Microbiology, June 1999, p. 1721-1726, Vol. 37, No. 6
0095-1137/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
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