Previous Article | Next Article 
Journal of Clinical Microbiology, June 1999, p. 1824-1828, Vol. 37, No. 6
0095-1137/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Susceptibility Testing of Anaerobic Bacteria:
Evaluation of the Redesigned (Version 96) bioMérieux ATB
ANA Device
L.
Dubreuil,*
I.
Houcke, and
E.
Singer
Faculté de Pharmacie, Lille, France
Received 27 July 1998/Returned for modification 29 September
1998/Accepted 22 February 1999
 |
ABSTRACT |
We compared the susceptibility results for 200 clinical anaerobes
with nine antibiotics obtained by using a new ATB ANA
(bioMérieux) device against those obtained by the National
Committee for Clinical Laboratory Standards (NCCLS) standard agar
dilution method. For better evaluation of the device, we added
some resistant Bacteroides fragilis group strains
from our own collection: 3, 6, and 12 strains that were resistant
to imipenem, ticarcillin plus clavulanic acid, and
co-amoxiclav, respectively, and 2 other strains with decreased susceptibility to metronidazole. For some strains that did not grow on
ATB S medium, tests were performed by using West-Wilkins medium
supplemented with 1.5% agar. The new ATB ANA device made clinical
categorization of the investigated strains possible, according to
French (Committee of the Antibiogram of the French Society of
Microbiology) or U.S. (NCCLS) breakpoints, with the following
respective results: category agreement, 94.3 and 94.9%; minor errors,
4.8 and 3.8%; major errors, 0.4 and 0.8%; and very major errors 4.6 and 4.2%. The ATB ANA device was able to detect low-level
metronidazole-resistant B. fragilis strains according to
the French breakpoints but not the NCCLS ones. For B. fragilis and
-lactamase-positive Prevotella
strains, the clustering effect of amoxicillin MICs around the French
breakpoints led to more frequent minor errors. ATB ANA is a very
convenient method to determine the antibiotic susceptibilities of
anaerobes. Results obtained by ATB ANA correlated well with those
obtained by the reference method.
 |
INTRODUCTION |
The clinical significance of
anaerobic bacteria and their increasing resistance to antimicrobials
have increased the importance of susceptibility testing (3-7,
14). Although there is some debate over the need for
susceptibility testing of current clinical isolates, there is
little doubt that at least on some occasions, susceptibility results
will be of clinical value for practitioners dealing with
anaerobic infections. The National Committee for Clinical Laboratory
Standards (NCCLS) recommends susceptibility testing in particular
situations (e.g., of isolates from brain abscess, endocarditis, joint
infections, prosthetic devices, or vascular grafts; from persisting or
recurring bacteremia; or from patients who do not respond to
empirically chosen chemotherapy) (13). The NCCLS
reference agar dilution method is not convenient for testing individual
isolates against a large battery of antimicrobial agents. As disk
diffusion test results for anaerobes do not correlate with those of
the reference method, alternative methods are required by
laboratories involved routinely in antibiotic susceptibility testing.
The ATB ANA and E test are preferred by most microbiologists. The first
ATB ANA strip was marketed with a system containing two fixed
antibiotic concentrations and 14 pairs of wells (non-MIC format). In
1993, the ATB ANA became a system using 25 single concentrations. The
choice of antimicrobial agents and the single breakpoint concentration
relied to a large extent on the NCCLS information supplement
(1991) for the susceptibility testing of anaerobes
(12). However, the NCCLS has recently introduced an intermediate category; thus, clinical categorization of anaerobes is
determined by ATB ANA with two fixed concentrations for most antibiotics. The remaining problem comes from the lack of worldwide agreement on antibiotic breakpoints. French-speaking countries follow the recommendation of the Committee of the Antibiogram of
the French Society of Microbiology (CA-SFM) (1), even if there are no specific breakpoints for anaerobes, while other countries either have their own values or apply the NCCLS ones. Thus, for some antibiotics more than two concentrations are proposed, with clinical categorization of strains according to both French and U.S.
criteria. The purpose of this study was first to evaluate the
performance of the ATB ANA at the concentrations contained in the
system. In addition, the interpretation of results according to both
CA-SFM and NCCLS breakpoints offers new information that could in
the future contribute to the setting up of worldwide antibiotic
breakpoints for anaerobes.
 |
MATERIALS AND METHODS |
Strains.
Tests were performed on 200 anaerobes isolated from
clinical specimens (Table 1) and
identified by classical procedures (17). Of these, 191 were
taken arbitrarily. Five strains of Bacteroides fragilis from
our collection were added for their resistance mechanisms: three had a
carbapenemase, one of these also had low-level metronidazole resistance
(MIC, >4 mg/liter), and two other strains were resistant to
co-amoxiclav but not to imipenem. Finally, four quality control strains
were added: B. fragilis ATCC 25285, Bacteroides
thetaiotaomicron ATCC 29741, Clostridium perfringens
ATCC 13124, and Eubacterium lentum ATCC 43055.
Determination of antibiotic MICs.
Version 96 of the ATB ANA
device was manufactured to correspond with the breakpoints values of
NCCLS approved standard M11-A3 (13) with its M100-S6
supplement. At the time we started this evaluation, Wilkins-Chalgren
medium was the recommended medium. MICs of amoxicillin, co-amoxiclav,
piperacillin, ticarcillin-clavulanic acid, cefoxitin, cefotetan,
imipenem, clindamycin, and metronidazole were determined by a reference
agar dilution method (NCCLS M11-A3) on Wilkins-Chalgren agar medium
(Unipath, Dardilly, France) (21). The final inoculum was
approximately 105 CFU per spot of inoculation. Thus, our
method was not exactly that currently recommended by the NCCLS, as
we used Wilkins-Chalgren medium instead of brucella blood agar,
although the NCCLS document indicates that the two media have
equivalent performances for all of the antibiotics used here except ticarcillin.
API ATB ANA.
The ATB ANA system is a freeze-dried panel with
large wells. The ATB ANA strip consists of 16 pairs of cupules. The
first pair does not contain any antibiotic and serves as a positive growth control. The next 12 pairs contain antibiotics at two
concentrations (corresponding to NCCLS M11-A3 M100-S6 breakpoints):
benzylpenicillin, 0.5 and 2 mg/liter; amoxicillin, 2 and 4 mg/liter;
co-amoxiclav, 4/2 and 8/4 mg/liter (throughout this paper, for
combination drugs the pair x/y refers to the concentrations
of the two drugs in the combination); piperacillin, 32 and 64 mg/liter;
ticarcillin-clavulanic acid, 32/2 and 64/2 mg/liter;
piperacillin-tazobactam, 32/4 and 64/4 mg/liter; cefoxitin, 16 and 32 mg/liter; cefotetan, 16 and 32 mg/liter; imipenem 4 and 8 mg/liter;
clindamycin, 2 and 4 mg/liter; chloramphenicol, 8 and 16 mg/liter; and
metronidazole, 8 and 16 mg/liter. Three wells, containing amoxicillin
at 16 mg/liter, co-amoxiclav at 16/2 mg/liter (a fixed concentration of
2 mg of clavulanic acid per liter in France), and metronidazole at 4 mg/liter, were added when CA-SFM and NCCLS breakpoints for
resistance were not identical. We conformed strictly to the
recommendations of the manufacturer, as follows. Colonies from Columbia
blood agar (after 24 to 48 h of growth) were picked up with a swab
and introduced into the suspension medium to produce a turbidity to
match the McFarland no. 3 standard (9 × 108 CFU/ml).
Two hundred microliters of this suspension was introduced into 7 ml of
antibiotic S medium, and 135 µl was further delivered with an
automatic pipette (bioMérieux) into each well of the ATB ANA
device. Incubation was carried out in an anaerobic chamber with an
atmosphere of 85% N2, 10% H2, and 5%
CO2. Unless adequate growth is achieved, susceptibility
testing cannot be done. The device was read visually by two
well-trained technicians as follows: susceptible, no growth;
intermediate, growth only at a low concentration; and resistant, growth
in both wells of the pair.
Comparison between methods.
For all of the strains and from
the individual MICs, a clinical categorization (susceptible,
intermediate, or resistant) was made according to the different CA-SFM
or NCCLS breakpoints (Table 2). These
results were compared with those obtained with the ATB ANA device,
and errors are defined as follows: minor errors, strains were
intermediate by one method and susceptible or resistant by the
other; major errors, strains were resistant by ATB ANA, and susceptible
by the reference method; very major errors, strains were susceptible by
ATB ANA and resistant by the reference method. Category agreement means
that strains are classified in the same category by both methods;
essential agreement means that there were minor errors only.
Medium substitution.
For 40 strains that failed to grow in
the ATB S medium, we decided to modify the protocol by using 7 ml of a
homemade West-Wilkins broth (20).
 |
RESULTS |
Detection of resistant strains and growth by ATB ANA.
With the
use of NCCLS or CA-SFM breakpoints, the ATB ANA device detected all
strains that were resistant to imipenem (3 strains) and piperacillin
(27 strains), 32 of 33 clindamycin-resistant strains, and 2 of 2 B. fragilis strains that were resistant to metronidazole at
a low level. By contrast, the ATB ANA device failed to detect
resistance to co-amoxiclav and ticarcillin-clavulanic acid for four and
two strains of the B. fragilis group, respectively. These
four strains had a rare resistance mechanism (lack of porin and/or
overproduction of the chromosomal
-lactamase); they were susceptible
to imipenem and not to the combinations of penicillin and
-lactamase
inhibitor (7).
All 100
B. fragilis group strains grew in ATB S medium.
Among the other species, 40 of 100 strains did not grow well in ATB
S
medium, particularly the strains of
Eubacterium (9 of 10)
and
Peptostreptococcus (18 of
25).
Results according to NCCLS breakpoints.
Category and
essential agreements between the two methods were observed
for 94.9 and 98.7% of the results, respectively (Table 3). Among the B. fragilis group, errors were more frequent, especially for
non-B. fragilis species; 42 of 50 minor errors were due to the clustering of MICs around the breakpoints. For all anaerobes (Table
3), most minor errors (40 of 68) were related to cefoxitin and
cefotetan, and category agreement for imipenem was 100%.
View this table:
[in this window]
[in a new window]
|
TABLE 3.
Comparison of results obtained by the ATB ANA and
reference agar dilution methods according to NCCLS or
CA-SFM breakpoints
|
|
Results according to CA-SFM breakpoints.
Category and
essential agreements between the two methods were observed for 94.3 and
99.1% of the results, respectively (Table 3). For gram-negative
bacilli, the more frequent minor errors were related to the
clustering around the breakpoint with either amoxicillin (MICs
of 16 or 32 mg/liter and breakpoint of 16 mg/liter) or cefotetan (MICs
of 32 or 64 mg/liter and breakpoint of 32 mg/liter). Sixty-nine of 87 minor errors were observed within the B. fragilis group. For
the nine antibiotics tested, we did not detect any very major
discrepancy among gram-positive anaerobes.
Differences according to type of antibiotic breakpoints.
The
numbers of very major errors were similar (4.2 versus 4.6%), but there
were more frequent minor errors (4.8 versus 3.8%) and fewer major
errors (0.4 versus 0.8%) when CA-SFM breakpoints were used.
 |
DISCUSSION |
Evaluation of the ATB ANA method.
The overall percentages of
errors (5.7 and 5.1%) nearly met the 5% limit set by Sherris and Ryan
(16) for aerobes. A higher tolerance level would be expected
for anaerobes, given the problems inherent in preparing correct inocula
and limited growth. Their suggested acceptable level of very major
errors (1.5% for all individual species tested) was not exceeded. The
other criteria proposed by Metzler and Dehaan (11) (false
susceptibility of <1% and false resistance of <5% for all tests),
by Jorgensen (10) (false susceptibility plus false
resistance of <7%), and by Thornsberry and Gavan (18)
(complete category agreement of >90% and false susceptibility plus
false resistance of <5%) are met by using the ATB ANA device. The
Food and Drug Administration (FDA) has established minimal performance
characteristics to assess antimicrobial susceptibility devices
(19). These guidelines indicate that category agreement
(applied to devices using category result formats) should be >90%,
major errors should be <3% for susceptible strains, and very major
errors should be
1.5% for resistant strains. Only the
last criterion was not satisfied in this study. Of 10 very major
errors observed among the 218 (CA-SFM) or 238 (NCCLS) resistant strains (Table 4), half came from the two
strains of our collection that were resistant to both co-amoxiclav and
ticarcillin-clavulanate but susceptible to imipenem. It is doubtful
that any method could satisfy this last criterion when anaerobes are
involved. Our results are somewhat better than those of studies
performed with an older version of the ATB ANA device (8, 9,
22). The prevalence of both resistant and intermediate strains
may greatly influence the evaluation of a new device. In our
present study, strains were classified 372 (CA-SFM) or 320 (NCCLS) of 1,800 times as either intermediate or resistant. For
some antibiotics (imipenem and metronidazole) to which resistance
was rare, it was necessary to add some resistant strains from our
collection. For Prevotella and Fusobacterium
we were unable to find metronidazole-, imipenem-, or
co-amoxiclav-resistant strains, while
Veillonella and C. perfringens strains were
susceptible to all of the investigated antibiotics. The
performance of the ATB ANA device with the nonmanufactured West-Wilkins
broth (data not shown) was identical to that with the ATB S medium.
View this table:
[in this window]
[in a new window]
|
TABLE 4.
Very major errors observed with strains categorized as
susceptible by the ATB ANA device according to NCCLS and
CA-SFM breakpoints
|
|
Differences according to type of antibiotic breakpoints.
There were 87 (CA-SFM) versus 68 (NCCLS) minor errors.
The striking differences came with amoxicillin (27 versus 6 strains), mostly within the B. fragilis group (22 versus 4 strains), and were associated
with clustering around the French breakpoints, since for 20 strains
amoxicillin MICs were equal to 16 or 32 mg/liter. There were also 6 (CA-SFM) versus 12 (NCCLS) major errors observed within the
B. fragilis group and related strains designated resistant to cefotetan and piperacillin by ATB ANA; the differences are attributed to the fact that in France the intermediate zone is wider.
Need and suggestion for new antibiotic breakpoints.
Comparison
of the MIC distribution and breakpoints suggests that both the French
and U.S. versions have useful features (Table 5). For gram-negative anaerobes the
NCCLS breakpoints for amoxicillin have many advantages: (i) the
amoxicillin breakpoint of 2 mg/liter may successfully separate
Prevotella and Fusobacterium strains into two
groups in relation to
-lactamase production (2) (MIC of
1 mg/liter if negative; MIC of
4 mg/liter if positive), and (ii)
at the concentration of 8 mg/liter, nearly all strains of the B. fragilis group are reported as being resistant to
aminopenicillins. However, as the NCCLS does not propose
breakpoints for gram-positive anaerobes, we suggest using the French
ones. The 2-mg/liter concentration of amoxicillin is inadequate for
gram-positive anaerobes and will classify strains of
Peptostreptococcus, Clostridium difficile, and
Eubacterium as intermediate, while the corresponding
infections will respond to treatment at normal dosages, even
though the amoxicillin MIC is equal to 4 mg/liter. Some strains
of Peptostreptococcus that are reported as being resistant
to amoxicillin (MIC,
8 mg/liter), will respond to treatment at a
higher dosage even though the amoxicillin MIC is equal to 8 or 16 mg/liter.
Although clavulanic acid has intrinsic activity against anaerobes,
comparison of amoxicillin MICs in the absence or presence
of clavulanic
acid is of interest. Thus, the co-amoxiclav breakpoint
may be aligned
to the amoxicillin one, and a 16/2-mg/liter combination
may be more
appropriate.
Limits for clindamycin are less important, as intermediate strains are
very rare. Low-level resistance to metronidazole (MIC
of 8 or 16 mg/liter) among the
B. fragilis group is related to
the
presence of
nim genes (
15). Although no clinical
failure
has yet been described, we suggest that such strains should be
placed in the intermediate category with the following breakpoints:
susceptible,

4 mg/liter; resistant,

32 mg/liter. Our proposals
have
to be further discussed but may help in finding a reasonable
compromise
between the NCCLS and CA-SFM breakpoints values for
anaerobes.
Routine susceptibility testing of anaerobes is easily available by
using the ATB ANA device. Results obtained with ATB ANA
version 96 correlated well with the reference agar dilution method.
Category
agreement was >94%, whereas the occurrences of major
plus very
major errors were 5%, for both the French and NCCLS
breakpoints.
This study validates the ATB ANA system as a very
convenient method for
anaerobes and offers new data to improve
or complete the establishment
of antibiotic
breakpoints.
 |
ACKNOWLEDGMENTS |
We are pleased to thank I. Phillips (London, United Kingdom) for
stimulating advice and helpful discussion and Alexandra Tavernier for
her help with the English text.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Faculté de
Pharmacie Lille, Lab. de Microbiologie Clinique, 3 Rue Laguesse, BP 83, 59006 Lille Cedex, France. Phone and Fax: 33.3.20.96.40.08. E-mail: ldubreui{at}phare.univ-lille2.fr.
 |
REFERENCES |
| 1.
|
Acar, J.,
H. Chardon,
P. Choutet,
P. Courvalin,
H. Dabernat,
H. Drugeon,
L. Dubreuil,
F. Goldstein,
C. Morel,
A. Philippon,
B. Rouveix,
J. Sirot, and A. Thabaut.
1996.
Communiqué 1996 du Comité de l'antibiogramme de la Société Francaise de Microbiologie. Valeurs critiques pour l'antibiogramme.
Pathol. Biol.
11:315-320.
|
| 2.
|
Appelbaum, P. C.,
A. Philippon,
R. Jacobs,
S. K. Spangler, and L. Gutmann.
1990.
Characterization of -lactamases from non-Bacteroides fragilis group Bacteroides spp. belonging to seven species and their role in -lactam resistance.
Antimicrob. Agents Chemother.
34:2169-2176[Abstract/Free Full Text].
|
| 3.
|
Bland, S.,
A. Sedallian,
G. Grollier,
F. Mory,
I. Houcke, and L. Dubreuil.
1995.
In vitro activity of three carbapenems biapenem, imipenem and meropenem and some other antibiotics against anaerobic bacteria.
Pathol. Biol.
43:289-293[Medline].
|
| 4.
|
Dubreuil, L.,
J. Breuil,
A. Dublanchet, and A. Sedallian.
1992.
Survey of the susceptibility patterns of Bacteroides fragilis group in France from 1977 to 1992.
Eur. J. Clin. Microbiol.
11:1094-1099.
|
| 5.
|
Dubreuil, L.,
I. Houcke,
Y. Mouton, and J. F. Rossignol.
1996.
In vitro activities of nitazoxanide and tizoxanide against anaerobes and aerobic organisms.
Antimicrob. Agents Chemother.
40:2266-2270[Abstract].
|
| 6.
|
Dubreuil, L.
1996.
Bacteroides fragilis: état de la sensibilité aux antibiotiques, évolution des résistances.
Med. Maladies Infect.
26(no. spécial):196-207.
|
| 7.
|
Grollier, G.,
F. Mory,
C. Quentin,
F. Girard-Pipau,
S. Tigaud,
A. Sedallian, and L. Dubreuil.
1994.
Survey of anaerobic susceptibility patterns: a French multicentric study.
Pathol. Biol.
42:498-504[Medline].
|
| 8.
|
Heizmann, W.,
H. Werner, and B. Herb.
1988.
Comparison of four commercial microdilution systems for susceptibility testing of anaerobic bacteria.
Eur. J. Microbiol. Infect. Dis.
7:758-763.
|
| 9.
|
Houcke, I.,
C. Pagniez,
V. Segard-Roussel, and L. Dubreuil.
1994.
Comparaison de deux techniques permettant d'apprécier la sensibilité aux antibiotiques des anaérobies stricts en routine: E test AB Biodisk et ATB ANA Biomérieux.
Pathol. Biol.
42:454-459[Medline].
|
| 10.
|
Jorgensen, J. H.
1993.
Selection criteria for an antimicrobial susceptibility testing system.
J. Clin. Microbiol.
31:2481-2484.
|
| 11.
|
Meztler, C. M., and R. M. Dehaan.
1974.
Susceptibility tests of anaerobic bacteria: statistical and clinical considerations.
J. Infect. Dis.
130:588-594[Medline].
|
| 12.
|
National Committee for Clinical Laboratory Standards.
1991.
Performance standards for antimicrobial susceptibility testing. Third informational supplement M100-S3.
National Committee for Clinical Laboratory Standards, Villanova, Pa.
|
| 13.
|
National Committee for Clinical Laboratory Standards.
1993.
Methods for antimicrobial testing of anaerobic bacteria, 2nd ed. Approved standard M11-A3.
National Committee for Clinical Laboratory Standards, Villanova, Pa.
|
| 14.
|
Patey, O.,
E. Varon,
I. Podglajen,
A. Dublanchet,
L. Dubreuil, and J. Breuil.
1994.
Multicentre survey in France of the antimicrobial susceptibilities of 416 blood culture isolates of the Bacteroides fragilis group.
J. Antimicrob. Chemother.
33:1029-1034[Free Full Text].
|
| 15.
|
Reysset, G.,
A. Haggoud, and M. Sebald.
1993.
Genetics of resistance of Bacteroides species to 5-nitroimidazole.
Clin. Infect. Dis.
16(Suppl. 4):S401-S403.
|
| 16.
|
Sherris, J. C., and K. J. Ryan.
1982.
Evaluation of automated and rapid methods, p. 1-5.
In
R. C. Tilton (ed.), Rapid methods and automation in microbiology. American Society for Microbiology, Washington, D.C.
|
| 17.
|
Summanem, P.,
E. J. Baron,
D. A. Citron,
C. A. Strong,
H. M. Wexler, and S. M. Finegold.
1993.
Wadworth anaerobic bacteriology manual, 5th ed.
Star Publishing Company, Belmont, Calif.
|
| 18.
|
Thornsberry, C., and T. L. Gavan.
1980.
Automated procedures for antimicrobial susceptibility tests, p. 491-494.
In
E. H. Lennette, A. L. Balows, W. J. Hausler, Jr., and J. P. Truant (ed.), Manual of clinical microbiology, 3rd ed. American Society for Microbiology, Washington, D.C.
|
| 19.
|
Tomfohrde, K. M.
1991.
Review criteria for assessment of antimicrobial susceptibility devices: what do they mean?
Clin. Microbiol. Newslett.
8:1-8.
|
| 20.
|
West, S. E., and T. D. Wilkins.
1980.
Vaspar broth disk procedure for antibiotic susceptibility of anaerobic bacteria.
Antimicrob. Agents Chemother.
17:288-291[Abstract/Free Full Text].
|
| 21.
|
Wilkins, T. D., and S. Chalgren.
1976.
Medium for use in antibiotic susceptibility testing of anaerobic bacteria.
Antimicrob. Agents Chemother.
10:926-928[Abstract/Free Full Text].
|
| 22.
|
Wust, J., and U. Hardegger.
1995.
Evaluation of the redesigned ATB ANA system version 93 for susceptibility testing of anaerobic bacteria.
Med. Microbiol. Lett.
4:68-75.
|
Journal of Clinical Microbiology, June 1999, p. 1824-1828, Vol. 37, No. 6
0095-1137/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
This article has been cited by other articles:
-
Boyanova, L., Kolarov, R., Gergova, G., Deliverska, E., Madjarov, J., Marinov, M., Mitov, I.
(2006). Anaerobic bacteria in 118 patients with deep-space head and neck infections from the University Hospital of Maxillofacial Surgery, Sofia, Bulgaria.. J Med Microbiol
55: 1285-1289
[Abstract]
[Full Text]
-
Klare, I., Konstabel, C., Muller-Bertling, S., Reissbrodt, R., Huys, G., Vancanneyt, M., Swings, J., Goossens, H., Witte, W.
(2005). Evaluation of New Broth Media for Microdilution Antibiotic Susceptibility Testing of Lactobacilli, Pediococci, Lactococci, and Bifidobacteria. Appl. Environ. Microbiol.
71: 8982-8986
[Abstract]
[Full Text]
-
Cotter, G., Adley, C. C.
(2001). Comparison and Evaluation of Antimicrobial Susceptibility Testing of Enterococci Performed in Accordance with Six National Committee Standardized Disk Diffusion Procedures. J. Clin. Microbiol.
39: 3753-3756
[Abstract]
[Full Text]