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Journal of Clinical Microbiology, August 2000, p. 2814-2818, Vol. 38, No. 8
0095-1137/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
Rapid Automated Antimicrobial Susceptibility
Testing of Streptococcus pneumoniae by Use of the bioMerieux
VITEK 2
James H.
Jorgensen,1,*
Arthur L.
Barry,2
M. M.
Traczewski,2
Daniel F.
Sahm,3,
M. Leticia
McElmeel,1 and
Sharon A.
Crawford1
Department of Pathology, The University of
Texas Health Science Center, San Antonio, Texas
782841; The Clinical Microbiology
Institute, Wilsonville, Oregon 970702; and
Department of Pathology, Washington University Medical
Center, St. Louis, Missouri 631103
Received 27 January 2000/Returned for modification 31 March
2000/Accepted 16 May 2000
 |
ABSTRACT |
The VITEK 2 is a new automated instrument for rapid organism
identification and susceptibility testing. It has the capability of
performing rapid susceptibility testing of Streptococcus
pneumoniae with specially configured cards that contain enriched
growth medium and antimicrobial agents relevant for this organism. The
present study compared the results of testing of a group of 53 challenge strains of pneumococci with known resistance properties and a collection of clinical isolates examined in two study phases with a
total of 402 and 416 isolates, respectively, with a prototype of the
VITEK 2. Testing was conducted in three geographically separate
laboratories; the challenge collection was tested by all three
laboratories, and the unique clinical isolates were tested separately
by the individual laboratories. The VITEK 2 results of tests with 10 antimicrobial agents were compared to the results generated by the
National Committee for Clinical Laboratory Standards reference broth
microdilution MIC test method. Excellent interlaboratory agreement was
observed with the challenge strains. The overall agreement within a
single twofold dilution of MICs defined by the VITEK 2 and reference
method with the clinical isolates was 96.3%, although there were a
number of off-scale MICs that could not be compared. The best agreement
with the clinical isolates was achieved with ofloxacin and
chloramphenicol (100%), and the lowest level of agreement among those
drugs with sufficient on-scale MICs occurred with
trimethoprim-sulfamethoxazole (89.7%). Overall there were 1.3% very
major, 6.6% minor, and no major interpretive category errors
encountered with the clinical isolates, although >80% of the minor
interpretive errors involved only a single log2 dilution
difference. The mean time for generation of susceptibility results with
the clinical isolates was 8.1 h. The VITEK 2 provided rapid,
reliable susceptibility category determinations with both the challenge
and clinical isolates examined in this study.
 |
INTRODUCTION |
Antimicrobial resistance among
clinical isolates of Streptococcus pneumoniae emerged as a
significant global problem in the decade of the 1990s (1, 5,
19). The prevalence of penicillin and multidrug-resistant strains
increased substantially during this period in the United States
(2, 3, 5, 14, 20). The National Committee for Clinical
Laboratory Standards (NCCLS) has developed reference broth
microdilution and disk diffusion methods for the testing of S. pneumoniae, as well as relevant quality control and interpretive
criteria for both of those methods (15, 16, 17). However,
the disk diffusion procedure does not provide acceptable accuracy when
pneumococci are tested with various beta-lactams (11). The
routine determination of MICs of penicillin and selected
extended-spectrum cephalosporins is now recommended for isolates from
patients with serious pneumococcal infections (17).
Commercially prepared broth microdilution panels that are derived from
the NCCLS reference method and the antibiotic gradient diffusion method
are available for routine testing of S. pneumoniae by
clinical laboratories (8, 9, 10). However, all of the
aforementioned methods require 20 to 24 h of incubation for
provision of results.
A new, more automated instrument for rapid identification and
antimicrobial susceptibility testing has recently been developed by
bioMerieux. Designated the VITEK 2, the new instrument uses bar coding
and a coded computer chip for specimen and test identification and
provides robotics for card filling and incubation (J.-P. Gayral, R. Robinson, and D. Sandstedt, microbiological testing. Abstr. Eur. Congr.
Clin. Microbiol. Infect. Dis., abstr. P254, 1997). A new 64-well card
is read by an automated photometer which takes kinetic turbidimetric
readings every 15 min during the incubation and analysis period.
Computer kinetic analysis of growth readings is used to determine the
MICs of the antimicrobial agents included in various VITEK 2 test
cards. Unlike the original VITEK instrument, the capability of testing
certain fastidious organisms (e.g., S. pneumoniae) will be
provided by the VITEK 2. The present study, conducted at three
different sites in two phases, has evaluated a prototype of the VITEK 2 and an S. pneumoniae susceptibility testing card that has
been formulated with a modified Wilkins-Chalgren medium and
antimicrobial agents appropriate for pneumococci. Approximately one-half of the antimicrobial agents were evaluated in phase 1 of this
study, and the remaining agents were evaluated in Phase 2. The VITEK 2 represents the first commercially available method for the rapid
determination (<15 h) of the MICs of antimicrobial agents for pneumococci.
 |
MATERIALS AND METHODS |
Test organisms.
A collection of 54 pneumococcal challenge
strains with known resistance properties and 407 and 423 unique
clinical isolates (in phases 1 and 2, respectively) of S. pneumoniae were selected for use in this evaluation. The clinical
isolates were selected to include 143 strains with previously
documented resistance to one or more antimicrobial agents (Table
1). Approximately one-third of the
clinical isolates were provided by and tested in each of the three
study laboratories. In addition, 10 and 12 strains of S. pneumoniae were tested by all sites repetitively in phase 1 and
phase 2, respectively, for determination of the reproducibilities of
the MICs determined by the VITEK 2 method.
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TABLE 1.
Summary of antimicrobial resistance properties of
challenge organism collection and clinical isolates of S. pneumoniae used in the study
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Antimicrobial agents.
The antimicrobial agents
(concentration ranges) used in the reference broth microdilution panels
were as follows: penicillin (0.008 to 32 µg/ml), amoxicillin (0.06 to
32 µg/ml), cefotaxime (0.03 to 16 µg/ml), ceftriaxone (0.015 to 64 µg/ml), vancomycin (0.25 to 32 µg/ml),
trimethoprim-sulfamethoxazole (0.06/1.14 to 32/608 µg/ml),
erythromycin (0.06 to 32 µg/ml), chloramphenicol (0.5 to 128 µg/ml), ofloxacin (0.25 to 32 µg/ml), and tetracycline (0.25 to 64 µg/ml). The VITEK 2 susceptibility cards contained modified
Wilkins-Chalgren medium with the following antimicrobial agents
(equivalent concentrations): penicillin (0.06 to 2 µg/ml), amoxicillin (0.06 to 4 µg/ml), cefotaxime (0.06 to 4 µg/ml),
ceftriaxone (0.06 to 4 µg/ml), vancomycin (1 and 2 µg/ml),
trimethoprim-sulfamethoxazole (0.5/9.5 to 16/304 µg/ml), erythromycin
(0.06 to 1 µg/ml), chloramphenicol (2 to 32 µg/ml), ofloxacin (1 to
8 µg/ml), and tetracycline (1 to 16 µg/ml).
VITEK 2 susceptibility tests.
The VITEK 2 cards were
inoculated and filled according to the manufacturer's instructions.
Briefly, this included preparation of inocula of the test organisms
from colonies grown on 5% sheep blood agar plates (Remel, Lenexa,
Kans.) that had been incubated for 18 to 20 h in 5%
CO2. The colonies were suspended in 0.45% saline to obtain
a suspension with a turbidity equivalent to the turbidity of a 0.5 McFarland standard and were further diluted by transferring 275 µl
into 2.5 ml of 0.45% sterile saline. This adjusted inoculum suspension
was used to fill the susceptibility cards, which were then inserted
into the prototype VITEK 2 incubator-reader within 15 min of
preparation. The same 0.5 McFarland suspensions were also used to
inoculate the reference microdilution panels at the same time.
Broth microdilution reference susceptibility tests.
The
reference susceptibility method consisted of frozen broth microdilution
panels prepared for this study by PASCO Laboratories (Aurora, Colo.).
The panels contained cation-adjusted Mueller-Hinton broth supplemented
with a final concentration of 2.5% lysed horse blood in accordance
with the NCCLS reference procedure for susceptibility testing of
S. pneumoniae (15). The contents of the tubes
with the 0.5 McFarland suspensions in saline used for the VITEK card inoculation were further diluted by adding 1.5 ml of the suspension to
12.5 ml of concentrated lysed horse blood supplement for the reference
microdilution panels. This resulted in a final inoculum density of
3 × 105 to 7 × 105 CFU/ml and 2.5%
lysed horse blood in the wells of the microdilution panels following
transfer with a disposable 96-prong plastic inoculator. The reference
panels were incubated at 35°C in ambient air for 20 to 24 h
prior to visual determination of MICs.
Quality control organisms.
The NCCLS control strain S. pneumoniae ATCC 49619 was used for daily quality control for both
the VITEK 2 and the reference MIC procedures. In addition,
Enterococcus faecalis ATCC 29212, E. faecalis
ATCC 51299, Staphylococcus aureus ATCC 29213, and Pseudomonas aeruginosa ATCC 27853 were used to provide
on-scale MICs of all drugs included in the reference MIC panels.
Comparison of results.
The MIC of each antimicrobial agent
generated by the prototype VITEK 2 was compared with the MIC of each
agent determined by the reference broth microdilution procedure. A
susceptibility category was also assigned to each MIC on the basis of
the current NCCLS interpretive breakpoint criteria (17).
Interpretive category errors were assessed for each drug on the basis
of the following definitions: very major error, susceptible by the
VITEK 2 method but resistant by the reference method; major error,
resistant by the VITEK 2 method but susceptible by the reference
method; minor error, intermediate by either the VITEK 2 or reference
method and either susceptible or resistant by the other method. It
should be noted that only the number of resistant strains was used as the denominator for calculation of very major errors and only the
number of susceptible strains was used as the denominator for
calculation of major errors. Both the VITEK 2 and reference tests were
repeated in triplicate when very major or major errors were noted from
the initial tests. The final error rates were calculated on the basis
of the values of the repeat test when errors were resolved.
 |
RESULTS |
This study has evaluated the performance of a prototype of
the VITEK 2 instrument for rapid susceptibility testing of a collection of challenge strains and clinical isolates of S. pneumoniae.
The tests with the VITEK 2 instrument were simple to perform, and the
MICs determined with the VITEK 2 instrument were quite reproducible between the three laboratories for the challenge collection of strains
and 10 antimicrobial agents (>97% agreement of MICs within a single
log2 dilution; data not depicted further). Despite the use
of the lysed horse blood supplementation of the reference microdilution
panels, the MICs for the nonfastidious NCCLS control strains were
within the published limits of NCCLS (17) for those drugs
for which use of only the S. pneumoniae standard control strain would not provide on-scale values.
With 7 of the 10 drugs included in the prototype VITEK 2 cards,
on-scale MICs were often generated. The MICs determined by the VITEK 2 method compared favorably (96.6 and 96.3% overall agreements within
±1 log2 dilution for the challenge strains for the
clinical isolates, respectively) with the MICs determined by the
reference method (Tables 2 and
3). The lowest degree of precise
agreement of MICs occurred with penicillin (83.3% with the challenge
strains and 89.9% with the clinical isolates) and trimethoprim-sulfamethoxazole (89.7% with clinical isolates). The MICs
determined by the VITEK 2 method were slightly higher than those
determined by the reference method for most of the drugs with the
challenge strains and for several drugs with the clinical isolates
(Tables 2 and 3). Despite this, the level of agreement of MICs within a
single dilution for both organism groups was greater than 94%.
Off-scale values occurred too frequently with the VITEK 2 tests for
meaningful comparison for erythromycin, tetracycline, and vancomycin
because of the limited number of concentrations of those agents in the
VITEK 2 cards around the interpretive breakpoints for the drugs. This
meant that the MICs for some strains with high-level erythromycin or
tetracycline resistance were reported to be greater than the highest
equivalent concentration included in the cards. Conversely, a number of
vancomycin MICs were reported as
1 µg/ml (the susceptible
breakpoint), since vancomycin resistance has not been encountered in
pneumococci.
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TABLE 2.
Comparison of MICs generated by the VITEK 2 method with
MICs generated by the reference method when 53 challenge strains were
tested in three laboratoriesa
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TABLE 3.
Comparison of MICs generated by the VITEK 2 method with
MICs generated by the reference method when 402 and 416 clinical
isolates were examined
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Relatively few very major and major interpretive category errors
resulted from the VITEK 2 tests with the challenge or clinical isolates
(Tables 4 and
5). These error rates were calculated after 17 tests were repeated in triplicate because of initial very
major or major errors; 6 of 17 errors were rectified by repeat testing.
With the clinical isolates there were 10% very major errors with
chloramphenicol, owing mostly to the lack of an intermediate interpretive category with that drug, and the clustering of many MICs
in the range of the single breakpoint between 4 and 8 µg/ml. Conversely, there were occasional major errors with four of the beta-lactams with the challenge strains but not with the clinical isolates (Tables 4 and 5).
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TABLE 4.
Interpretive category errors encountered with 53 challenge strains tested in all three laboratories by VITEK 2 and
reference methodsb
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The highest rate of minor errors with the clinical isolates occurred
with trimethoprim-sulfamethoxazole, primarily due to the tendency for
the reporting of higher MICs by the VITEK 2 method (Tables 2, 3, 4, and
5). A number of minor errors with the beta-lactams was noted to be due
to the clustering of the MICs for both the challenge and resistant
clinical isolates near the interpretive breakpoints. However, many of
these minor interpretive errors were associated with insignificant (±1
log2 dilution) differences in MICs (Tables 4 and 5).
Indeed, when only those minor errors due to MICs determined by the
VITEK 2 method that were greater than 1 log2 dilution from
the values determined by the reference method were considered, only the
results for tests with penicillin and the challenge strains were
associated with substantial rates (>5%) of minor errors.
The times for provision of VITEK 2 susceptibility test results are
depicted in Table 6 for each drug and for
the challenge strains and clinical isolates. The clinical isolates
required slightly longer analysis times, although the mean time for
completion of all tests was 8.1 h. Some results were available in
as little as 3.4 h, and all tests were complete by 14 h of
incubation and analysis. There was no association between the length of
time required for results with a particular strain and the agreement of
the values obtained by the VITEK 2 method with the values obtained by
the reference method.
 |
DISCUSSION |
The increased prevalence of penicillin and multidrug resistance
among S. pneumoniae strains in the past decade in North
America (2, 3, 5, 7, 19, 20) has made it necessary for clinical laboratories to reevaluate their routine practices for susceptibility testing of pneumococcal isolates. Practical options for
testing include the NCCLS disk diffusion procedure, tests with several
commercial broth microdilution products, and the E test (8).
However, none of the current methods offer the possibility of
generating results in less than 18 to 24 h or offer automated
reading of test panels. Thus, the VITEK 2 represents the first system
for provision of rapid susceptibility test results with pneumococci.
The VITEK 2 tests with the clinical isolates in this study were
completed in an average of 8.3 h.
In the VITEK 2, inoculation and manipulation of the test cards for
pneumococcal isolates were accomplished in the same manner as those
procedures for tests with nonfastidious organisms. Because this study
used a prototype of the VITEK 2 rather than a final production version
of the instrument, it is not possible to state the amount of hands-on
time required to perform the testing of pneumococci. However, the new
instrument is designed to provide a card-filling and processing system
that is more streamlined and efficient than the current VITEK and is
said to require only about 25% as much hands-on time for each test
compared to that required for a broth microdilution procedure (Gayral
et al., Abstr. Eur. Congr. Clin. Microbiol. Infect. Dis.).
This study has assessed the ability of the VITEK 2 to generate accurate
susceptibility testing results with a carefully selected group of
challenge strains and clinical isolates of pneumococci that included a
large number of resistant strains. The collection included strains
resistant to all of the drugs in this study with the exception of
vancomycin. Furthermore, isolates were selected in part because the
beta-lactam MICs for the isolates spanned the breakpoints for
susceptibility, intermediate, and resistance. In general, the
susceptibility results generated with VITEK 2 agreed closely with the
results generated by the reference method. Very few very major or major
interpretive errors resulted from the tests conducted in this study.
Because of the large number of isolates for which MICs were adjacent to
the NCCLS breakpoints, the normal minor error rate calculations for the
penicillins and cephalosporins seem excessive. However, when the MICs
that differed by only a single log2 dilution were excluded,
the number of minor interpretive errors was quite modest, i.e., less
than 5% for tests with all drugs except penicillin with the challenge organisms.
The VITEK 2 provided accurate MICs of most of the antimicrobial agents;
the notable exceptions were penicillin and
trimethoprim-sulfamethoxazole (only for the clinical isolates). The
trimethoprim-sulfamethoxazole MICs may have been elevated due to the
greater thymidine content of the Wilkins-Chalgren broth compared to
that of the lysed horse blood-supplemented broth used in the reference
procedure, since lysed horse blood is a source of thymidine
phosphorylase that reduces folate antagonists in media. The penicillin
MICs differed by 2 doubling dilutions for 8 of 48 challenge strains and
10 of 98 clinical isolates. However, the amoxicillin and cephalosporin MICs generated by the VITEK 2 method agreed closely with the values generated by the reference method (i.e., >94% essential agreement). The reliable determination of MICs of beta-lactam antibiotics has
recently become important because of the recognition that patients with
pneumococcal pneumonia caused by strains for which penicillin or
parenteral cephalosporin MICs are in the intermediate category are
amenable to treatment with those agents (6, 13, 18). Thus,
determination of the MICs of those agents is now critical for selection
of appropriate therapy for patients with life-threatening infections
(e.g., meningitis) and for patients with common respiratory tract
infections due to pneumococci (e.g., pneumonia) (6, 17).
Areas for improvement or further development of the VITEK 2 for the
testing of pneumococci include possible further refinements of the
interpretive algorithms that might reduce the minor errors associated
with penicillin testing. In addition, it would be helpful to extend
upward the equivalent concentrations of erythromycin so that high-level
erythromycin resistance (usually due to ribosomal target modification)
could be separated from low-level macrolide resistance due to drug
efflux (5). Lastly, laboratories will undoubtedly wish to be
able to test newer fluoroquinolones with improved activity against
pneumococci (e.g., levofloxacin, gatifloxacin, gemifloxacin, and
moxifloxacin) in light of emerging fluoroquinolone resistance (4,
12), and carbapenems (e.g., imipenem and meropenem). Thus,
additional drugs are needed to provide a well-rounded battery for the
testing of drug-resistant pneumococci in the VITEK 2.
In conclusion, the VITEK 2 offers the potential for determination of
the antimicrobial susceptibilities of pneumococcal clinical isolates by
an automated method that is more rapid than current conventional or
commercial test procedures. The ability to test pneumococci in the same
instrument that is used for testing of various species of nonfastidious
organisms should be a valuable feature for clinical laboratories. The
MICs generated by the VITEK 2 method compared favorably in this study
(within a single dilution) with the MICs generated by the NCCLS
reference broth microdilution method for a majority of the agents
tested, and few very major or major interpretive errors were
encountered. The final selection of antimicrobial agents for the
production VITEK 2 cards awaits further development of procedures for
inclusion of additional agents in the VITEK 2 cards.
 |
ACKNOWLEDGMENT |
This study was supported in part by a grant and materials from
bioMerieux Inc., Hazelwood, Mo.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Department of
Pathology, University of Texas Health Science Center, 7703 Floyd Curl Dr., San Antonio, TX 78284-7750. Phone: (210) 567-4088. Fax: (210) 567-2367. E-mail: jorgensen{at}uthscsa.edu.
Present address: MRL Pharmaceutical Services, Reston, VA.
 |
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Journal of Clinical Microbiology, August 2000, p. 2814-2818, Vol. 38, No. 8
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Copyright © 2000, American Society for Microbiology. All rights reserved.
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