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Journal of Clinical Microbiology, November 2001, p. 4052-4057, Vol. 39, No. 11
0095-1137/01/$04.00+0 DOI: 10.1128/JCM.39.11.4052-4057.2001
DNA Relatedness, Phenotypic Characteristics, and Antimicrobial
Susceptibilities of Globicatella sanguinis Strains
P. Lynn
Shewmaker,1,*
Arnold G.
Steigerwalt,2
LaShondra
Shealey,1
Robbin
Weyant,2 and
Richard
R.
Facklam1
Respiratory Diseases
Branch1 and Meningitis and
Special Pathogens Branch,2 Bacterial and
Mycotic Diseases, National Center for Infectious Diseases, Centers
for Disease Control and Prevention, Atlanta, Georgia 30333
Received 23 May 2001/Returned for modification 2 August
2001/Accepted 4 September 2001
 |
ABSTRACT |
DNA-DNA reassociation was performed on 15 strains of
Globicatella sanguinis to compare their taxonomic status
with phenotypic characterization. All 15 strains selected for DNA-DNA
reassociation readily met the criteria for species relatedness. The
relative binding ratio was 81% or greater at the optimal temperature
and 76% or greater at the stringent temperature, and the divergence was less than 3% for all strains hybridized with the type strain. These strains included nine strains from the Centers for Disease Control Streptococcus Laboratory culture collection that were previously included in comparative 16S rRNA gene sequencing studies as
well as six additional phenotypically variant isolates. DNA-DNA relatedness was less than 18% at the optimal reassociation temperature to Aerococcus viridans, Enterococcus avium, and
Streptococcus uberis, which are phenotypically similar to
G. sanguinis. This study confirms these
Globicatella strains were previously misidentified as
S. uberis or S. uberis-like strains based on
biochemical characteristics. The biochemical data from 28 strains was
compiled to further define the phenotypic criteria for identification
of this species. A revised description of the species should be
variable reaction for pyrrolidonylarylamidase production (75%
positive), positive reaction for the bile esculin test (100%), growth
at 45°C (96%), variable reaction for acid production from arabinose
(45% positive), and negative starch hydrolysis (0% positive). We also
evaluated four rapid identification systems, the Biomerieux rapid ID32
STREP (ID32), the Crystal rapid gram-positive identification (Cry4), the BBL Crystal gram-positive identification (Cry24), and the Remel IDS
RapID STR (IDS) systems for their ability to identify these strains.
 |
INTRODUCTION |
In the 1977 summary of the
identification of viridans streptococci isolated from human sources, 7 of 1,227 isolates were reported to be Streptococcus uberis
(10). It was noted at that time that these isolates
phenotypically resembled Streptococcus mutans based on
biochemical reactions. However, four of the seven strains grew in 6.5%
NaCl broth, which differentiated this species from all other viridans
streptococci. Some of these strains, identified as S. uberis, were distributed to commercial manufacturers of kits
designed to identify viridans streptococci (15, 16, 30). These strains had phenotypic characteristics similar to those described
in 1977 and were identified as S. uberis (10)
until 1990. With the advent of new tests to discriminate between the genera of gram-positive cocci, it became clear that our phenotypic criteria for identification of S. uberis was probably not valid.
In 1992, comparative 16S rRNA gene sequencing data for nine of these
strains were analyzed to determine their phylogenetic position
(4). In this study, the highest sequence homology was
shown with the genus Aerococcus (91%), followed by the
lactococci (88%), leuconostocs (86 to 89%), pediococci (89 to 90%),
and streptococci (87 to 88%). Phylogenetic analysis showed an unknown
line of descent within the lactic acid group of bacteria
(4). Therefore, based on phenotypic similarities and 16S
rRNA sequence analysis, these isolates were shown to represent a new
genus and species for which the name Globicatella sanguinis
(sanguis) was proposed (4). The species of the
genus was later renamed from sanguis to sanguinis in order to conform with the rules of Latin grammar (27).
G. sanguinis closely resembles aerococci, streptococci, and
enterococci phenotypically (9, 12, 14). The major
differentiating characteristic between Globicatella and the
aerococci is the cellular arrangement of the cells in the Gram stain.
Globicatella forms chains while the aerococci form tetrads
and clusters. The colonial morphology of Globicatella
strains most closely resembles the viridans streptococci. However,
these strains are readily distinguished with a negative leucine
aminopeptidase reaction (LAP) and growth in the presence of 6.5% NaCl.
The viridans streptococci are pyrridonylarylamidase (PYR) negative and
LAP positive and do not grow in the presence of 6.5% NaCl. The
enterococci are PYR and LAP positive and grow at 10°C. None of the
Globicatella isolates grew at 10°C or gave positive LAP reactions.
The isolation of these strains from normally sterile body sites (21 of
the isolates were from blood, 3 were from cerebrospinal fluid [CSF],
and 4 were from urine) and that they were referred to the Centers for
Disease Control and Prevention by 13 different state health departments
and Canada indicates that this organism is clinically significant. The
purpose of this communication is to report on DNA-DNA
reassociation studies, modified phenotypic criteria for identification
of this species, the evaluation of four commercial identification
systems, and antimicrobial susceptibilities.
 |
MATERIALS AND METHODS |
Bacterial strains.
A total of 28 strains were studied,
including the 9 previously described strains that were determined to
represent the genus and species based upon 16S rRNA sequencing data
(4). All of the reference and test strains were obtained
from the culture collection of the Streptococcus Laboratory, Centers
for Disease Control and Prevention. The type or reference strains were
received from the following: Aerococcus viridans (SS1251,
ATCC 11563T) was obtained from the American Type Culture
Collection, Manassas, Va., S. uberis (SS842, 0100) was
received from G. A. Cullen in England (5), and
Enterococcus avium (SS817, NCTC 9938, NCDO 2369, ATCC14025T) was received from the late W. Maxted,
Streptococcus Reference Laboratory, Colindale, United Kingdom.
Phenotypic characterization.
A total of 28 strains were
compared for their phenotypic characteristics by performing
conventional biochemical tests as described previously by Facklam et
al. and Collins et al. (4, 11).
DNA reassociation studies.
The cultures were grown in 1,000 ml of Todd-Hewitt broth for 18 to 24 h at 35°C on a rotary shaker
(New Brunswick Scientific, Edison, N.J.). The bacterial cells were
harvested by centrifugation and lysed as previously described
(25). The bacterial cells were resuspended in 50 ml of TS
buffer, which contains 50 mM Tris (pH 8.0)-12.5% sucrose, before the
addition of 20 ml of lysozyme solution (Sigma, St. Louis, Mo.; 10 mg/ml), 500 µl of mutanolysin (Sigma; 2,000 U/ml), and 30 ml of EDTA
(50 mM). After a 2-h incubation at 35°C on a rotary shaker, 500 µl
of Proteinase K (25 mg/ml) was added and the suspension was incubated
for an additional 1 h. The cells were lysed by the addition of 4 ml of a 25% sodium dodecyl sulfate solution. The techniques used in
the purification and reassociation of DNA using the hydroxyapatite
method were those previously described (3). The DNA from
the type strain (1152-78, NCFB 2835) was labeled with
[32P]dCTP by using a nick translation kit (Gibco BRL,
Life Technologies, Inc., Gaithersburg, Md.) as directed by the
manufacturer. The temperatures used for DNA reassociation were 55°C
(optimal conditions) and 70°C (stringent conditions). The percent
divergence (%D) was calculated as a decrease of 1°C in thermal
stability of a heterologous DNA duplex, which correlates to
approximately 1% unpaired bases within related DNA.
Identification of G. sanguinis using commercial
systems.
The four systems evaluated for the identification of
G. sanguinis were the rapid ID 32 STREP (ID32; Biomerieux,
Inc., Hazelwood, Mo.) (17), the BBL Crystal Rapid
Gram-Positive ID Kit (Cry24) and the BBL Crystal Gram-Positive ID Kit
(Cry4; Crystal; BD Bioscience, Cockeysville, Md.) (28),
and the RapID STR (IDS; Remel, Inc., Lenexa, Kaus.) (2, 18,
22). All systems were used according to the manufacturer's
instructions provided in the package inserts. Each system generates a
profile number which we transmitted to each manufacturer to obtain the
reported identification.
Antimicrobial susceptibility testing.
Antimicrobial
susceptibility was determined using microdilution in customized panels
containing lysed horse-blood-supplemented cation-adjusted
Mueller-Hinton broth designed specifically for MIC testing of
streptococci species (PML Microbiologicals, Wilson, Oreg.) and the
methods described by NCCLS (21). The following antibiotics
and ranges were tested: penicillin, 0.03 to 16.0 µg/ml; amoxicillin,
0.03 to 8.0 µg/ml; cefotaxime, 0.06 to 16.0 µg/ml; erythromycin,
0.06 to 16.0 µg/ml; cefuroxime, 0.25 to 32.0 µg/ml; trimethoprim-sulfamethoxazole, 0.12, 2.38 to 8.0, and 152.0 µg/ml; clindamycin, 0.06 to 2.0 µg/ml; chloramphenicol, 2.0 to 16.0 µg/ml; levofloxacin, 0.5 to 16.0 µg/ml; meropenem, 0.06 to 2.0 µg/ml; tetracycline, 2.0 to 8.0 µg/ml; and vancomycin, 0.12 to 2 µg/ml. The panels were incubated in ambient air at 35°C for 20 to
24 h and read visually with the aid of a mirror panel viewer.
Quality control was performed as previously described with two control strains of Streptococcus pneumoniae (19, 20).
 |
RESULTS AND DISCUSSION |
Clinical data.
The source, clinical diagnosis, and demographic
data was provided with the 28 clinical isolates and is summarized in
Table 1. This data suggests that G. sanguinis is capable of causing serious infection and is most
likely an opportunistic pathogen. The majority of strains
(22) were isolated from blood, and 2 isolates were from
CSF. The remaining four strains were from urine. The ages of patients
were given for 18 isolates, with infection occurring most often in the
very young and very old. Five of the isolates were from children less
than 3 years old, and 11 isolates were from patients over 65 (average
age, 80.5 years old). The sex of the patient was known for 23 of the 28 isolates. At first glance it would appear that females are
predominately more at risk; however, this is more likely due to the
population in the age group rather than a propensity of the bacterium,
since of the 7 patients under age 65, 3 were male and 4 were female.
DNA-DNA reassociation.
The type strain (1152-78) was labeled
with 32P in the DNA reassociation studies and hybridized
with 14 biochemically similar strains of G. sanguinis (Table
2). The relative binding ratio at the
optimal temperature (55°C) was 81% or greater and was 76% or
greater at the stringent temperature (70°C), and the divergence was
less than 3.0% for all Globicatella strains hybridized with the type strain. The three criteria for DNA-DNA relatedness at the
species level include (i) relatedness greater than 70% under optimal
conditions, (ii) relatedness greater than 60% under stringent conditions, and (iii) divergence less than 5% among the related sequences (29). Based on these criteria, these strains
readily met the definition of species relatedness. In addition, the
type strains of E. avium (SS817), S. uberis
(SS842), and A. viridans (SS1251) were hybridized against
G. sanguinis (1152-78) at the optimal temperature. The
relative binding ratios were less than 18%, indicating that
Globicatella are clearly genetically distinct from these
phenotypically similar organisms.
Biochemical reactions.
The biochemical reactions for the 28 G. sanguinis strains tested are shown in Table
3. All strains were nonmotile,
gram-positive ovoid cocci in short chains, produced alpha hemolysis on
tryptic soy agar (TSA) supplemented with 5% defibrinated sheep blood, and were susceptible to vancomycin. All strains were positive for the
hydrolysis of esculin and hippurate and growth in 6.5% NaCl. None of
the strains produced gas in Lactobacillus Mann-Rogosa-Sharpe broth, produced LAP, or grew at 10°C. In contrast to the previous description of the type strain of the species (4), all
strains hydrolyzed esculin in the presence of bile, the majority grew at 45°C, and all were negative for starch hydrolysis and were variable in the tellurite (0.4%) tolerance test. Biochemical testing of additional G. sanguinis strains (confirmed by DNA-DNA
reassociation) revealed that the production of PYR and acid production
from arabinose, ribose, and sorbitol are variable reactions for the
species. As previously described, none of the strains produced acid
from glycerol or sorbose, and all were negative in the reactions for
urea, pyruvate, and Voges-Proskauer. Acid was produced from inulin,
lactose, maltose, mannitol, melibiose, raffinose, sucrose, and
trehelose as previously described.
This present study indicates that the original phenotypic description
of
G. sanguinis should be broadened for identification
of
this species. These variable phenotypic reactions make it even
more
difficult to distinguish
Globicatella from other
phenotypically
similar bacteria (Table
3). The biochemical
characteristics of
the most recently identified strains of
A. viridans (28 strains),
E. avium (28 strains), and
S. uberis (9 strains, all nonhuman)
were compared to the 28 strains of
G. sanguinus. A. viridans is
biochemically very similar to
G. sanguinis. The colony
morphologies
are very similar on TSA supplemented with 5% sheep
blood agar,
and both are LAP negative and grow in 6.5% NaCl. The
cellular
arrangement from growth in broth can be used to differentiate
the two, as
A. viridans is arranged in clusters and tetrads
and
G. sanguinis is arranged in short chains. Fermentation
of inulin
can be a useful test, as the majority of
G. sanguinis strains
are positive and
A. viridans
strains are negative. The other key
reactions for bile esculin,
esculin, and hippurate are of limited
value in separating these two
species, since the PYR test yields
a variable result for
G. sanguinis and the bile esculin, esculin,
and hippurate
tests yield variable reactions for
A. viridans.
The LAP test is also useful in distinguishing enterococci from
Globicatella strains.
E. avium is further
identified by positive
pyruvate and sorbose tests and negative inulin
and raffinose tests.
G. sanguinis has the reverse reactions.
The two species are phenotypically
similar in their reactions to PYR
and bile esculin, their growth
in 6.5% NaCl and at 45°C their
hydrolysis of esculin and hippurate
reactions, and their acid
production from lactose, maltose, mannitol,
sorbitol, sucrose, and
trehelose.
S. uberis has been included in the identification scheme
with viridans streptococci for a number of years (
10,
24).
The
incorporation of the PYR and LAP tests in the identification scheme
as well as molecular studies have confirmed that many of the strains
that are now
Globicatella were previously reported as
S. uberis-like.
The key test for differentiation of the
streptococci from
Globicatella is the positive LAP reaction.
S. uberis is also negative for esculin
hydrolysis in the
presence of bile, and it is positive for growth
at 10°C. The majority
of strains for both species are PYR positive,
grow in 6.5% NaCl,
hydrolyze esculin and hippurate, and produce
acid from inulin, lactose,
maltose, mannitol, raffinose, ribose,
sorbitol, sucrose, and trehelose.
Acid is not produced from glycerol
and sorbose for both
species.
Identification of G. sanguinis using commercial
systems.
Of the four commercial identification systems, only Cry24
has G. sanguinis in its data bank. Therefore, the correct
identifications should be G. sanguinis for the Cry24 system,
"unacceptable identification" for the Cry4 and ID32 systems, and
"no choice" for the IDS system. In each system the tests are scored
to give a profile number. These profile numbers were transmitted to the
manufacturer of each product, and their identification was reported
back to us. No recommendation was given for the probability cutoff for
an acceptable identification using the Cry24 and Cry4 systems. We considered any identification with a probability of less than 0.9 to be
an unacceptable identification. A summary of these identifications is
shown in Table 4. In each of the test
systems, a test was considered positive when greater than 94% of the
strains tested positive and were considered negative when less than 6%
of the strains tested positive. A test was considered variable when
greater than 5% strains tested positive and less than 95% of the
strains tested negative.
Cry24.
The Cry24 system is comprised of 29 different tests.
The 28 strains of G. sanguinis generated 20 different
profile numbers, with results from 8 of 29 tests yielding
positive results, 7 of 29 yielding negative results, and 14 yielding
variable results (Table 4). This correlates to 52% of the tests
described as being useful in devising a profile. Using the
manufacturers current database and our cutoff value of 0.9 probability,
the Cry24 system identified 8 (29%) strains as G. sanguinis, 2 strains (7%) as Streptococccus bovis, 1 strain (4%) as Streptococcus cricetus, and 1 strain (4%)
as Enterococcus raffinosus. The other 16 strains (57%) were
not identified. The incorporation of one key test, the LAP reaction,
would have excluded these misidentifications. The 16 other strains that
were unidentified or identified with a probability of less than 0.9 could most likely be correctly identified with the incorporation of the
additional profiles generated from our strains into their database. The
fluorescent and colorimetric reactions in this panel as well as in the
Cry4 system were somewhat difficult to interpret with these strains.
Cry4.
The Cry4 system also contains 29 tests. Twenty-two
different profile numbers were generated with this system, yielding 12 positive test results, 7 negative test results, and 10 variable test results. This correlates to 66% of the tests being useful in
establishing a profile. The Cry4 system identified 12 strains (43%) as
E. raffinosus, 7 strains (25%) as A. viridans,
and 1 strain (4%) as E. avium. The profiles of the
remaining 8 strains (29%) were "no identification" profiles or
"low indeterminate" identifications. As mentioned earlier, the
incorporation of the LAP reaction would eliminate the majority of
enterococcus misidentifications. However, the seven profiles that
showed a high match with A. viridans are more problematic.
As we noted earlier, these two species are very similar at the genus
level in tests using conventional biochemicals. The only conventional
clear-cut test to distinguish these two species is the Gram stain. The
cellular arrangement of G. sanguinis is pairs and short
chains, whereas Aerococcus is arranged in clusters and tetrads.
ID32.
The 28 strains of G. sanguinis tested with
this kit generated 25 different profile numbers. All these profiles
were correctly identified as "unacceptable profile," shown in Table
4. Of the 32 tests in this panel, 16 were positive, 6 were negative,
and 10 were variable. This kit showed the greatest potential for use, since there were 22 clear-cut test results resulting in 69% useful tests. The manufacturer should have to include only the profiles we
generated in their database to identify this species. This kit was
relatively easy to set up and interpret, although there was some
difficulty in reading some of the colorimetric reactions with these strains.
IDS.
The IDS system is comprised of 14 different tests. The 28 test strains generated 13 different profiles, with 3 positive, 6 negative, and 5 variable tests (Table 4). Sixty-four percent of the
tests could be used in establishing a profile for the identification of
Globicatella. Seven strains (25%) were misidentified as
S. mutans (5 strains), Enterococcus casseliflavus
(1 strain), or Enterococcus malorderatus (1 strain).
Globicatella strains could be distinguished from these
genera with the incorporation of the LAP reaction. As previously
mentioned, Globicatella strains are LAP negative. Twenty-one
strains (75%) gave inadequate profiles for identification. These
results are promising, since the incorporation of the profiles
generated and incorporation of the LAP reaction should identify the
majority of strains.
With the exception of the ID32 system, it is apparent the
G. sanguinis strains have the potential of being misidentified by
using these rapid commercial systems. Incorporation of the generated
profiles into the database of the ID32 system should identify
the
majority of strains of
G. sanguinis. The products of
manufacturers
of the Cry24, Cry4, and IDS systems may require
supplemental tests
in order to obtain an accurate identification, since
some strains
gave identical profiles with phenotypically similar
species. This
updated description should improve the identification of
G. sanguinis.
Antimicrobial susceptibility testing.
Antimicrobial
susceptibility testing was performed on 27 of the 28 G. sanguinis clinical isolates in the study. One strain (2434-91) was
not viable in the medium, and MICs were not determined for this
isolate. The MIC range and the MICs at which 50 and 90% of the
isolates tested are inhibited of 12 antimicrobial agents are shown in
Table 5. The NCCLS MIC interpretive
standards for Streptococcus spp. (viridans) other than
S. pneumoniae were used for penicillin, cefotaxime,
meropenem, erythromycin, clindamycin, chloramphenicol, levofloxacin,
and vancomycin (21). The NCCLS MIC interpretive standards
for S. pneumoniae were used for amoxicillin, cefuroxime, and
trimethoprim-sulfamethoxazole. Resistance varied significantly among
the 12 agents assayed. All isolates were susceptible to 2 of the 12 antimicrobial agents, amoxicillin and vancomycin. The penicillin MICs
for two of the isolates were in the intermediate susceptibility range
as defined by NCCLS (21). Of isolates tested with the
remaining antimicrobial agents, 48% were resistant to cefotaxime, 74%
were resistant to cefuroxime, 37% were resistant to meropenem, 48%
were resistant to erythromycin, 52% were resistant to
trimethoprim-sulfamethoxazole, 30% were resistant to clindamycin, and 52% were resistant to vancomycin. Twenty-six of the isolates were
readily susceptible to levofloxacin; only one isolate was resistant.
This strain was a blood isolate and showed resistance upon repeat
testing. Four percent of the strains were resistant to chloramphenicol;
however, 15% were intermediately resistant. Similar susceptibility
patterns have been shown in the Facklamia sp. and viridans
streptococci in recent studies (23, 26).
G. sanguinis isolates are clinically significant
microorganisms. Based on colonial morphology on 5% sheep blood agar,
they
are easily confused with viridans streptococci but are clearly
distinguished by the negative LAP reaction and growth in 6.5%
NaCl.
The negative LAP reaction also separates the genus from
the
enterococci. This genus is very difficult to distinguish from
the
aerococci. The acidification of inulin and the Gram stain
(the only
clear-cut test) are most useful. The aerococci are arranged
in tetrads
and clusters and are inulin negative.
G. sanguinis is
arranged in pairs and short chains and is inulin positive.
With the
increasing incidence of drug-resistant microorganisms,
accurate
identification and susceptibility testing is becoming
more important
(
8). Previous studies of antimicrobial susceptibilities
of
viridans streptococci may have included some misidentified
G. sanguinis strains. Since this bacterium shows some intermediate
resistance to penicillin, it is important to accurately identify
and
monitor drug
resistance.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Centers for
Disease Control, NCID, DBMD, RDB, 1600 Clifton Rd., N.E. Mailstop CO2, Atlanta, GA 30333. Phone: (404) 639-4826. Fax: (404) 639-3123. E-mail:
PAW3{at}CDC.GOV.
 |
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Journal of Clinical Microbiology, November 2001, p. 4052-4057, Vol. 39, No. 11
0095-1137/01/$04.00+0 DOI: 10.1128/JCM.39.11.4052-4057.2001
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