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Journal of Clinical Microbiology, April 2001, p. 1311-1315, Vol. 39, No. 4
0095-1137/01/$04.00+0 DOI: 10.1128/JCM.39.4.1311-1315.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Differentiation of Resistance Phenotypes among
Erythromycin-Resistant Pneumococci
Maria Pia
Montanari,
Marina
Mingoia,
Eleonora
Giovanetti, and
Pietro Emanuele
Varaldo*
Institute of Microbiology, University of
Ancona Medical School, 60131 Ancona, Italy
Received 18 October 2000/Returned for modification 30 December
2000/Accepted 29 January 2001
 |
ABSTRACT |
Laboratory differentiation of erythromycin resistance phenotypes is
poorly standardized for pneumococci. In this study, 85 clinical
isolates of erythromycin-resistant (MIC
1 µg/ml)
Streptococcus pneumoniae were tested for the resistance
phenotype by the erythromycin-clindamycin double-disk test (previously
used to determine the macrolide resistance phenotype in
Streptococcus pyogenes strains) and by MIC induction tests,
i.e., by determining the MICs of macrolide antibiotics without and with
pre-exposure to 0.05 µg of erythromycin per ml. By the double-disk
test, 65 strains, all carrying the erm(AM) determinant,
were assigned to the constitutive macrolide, lincosamide, and
streptogramin B resistance (cMLS) phenotype, and the remaining 20, all
carrying the mef(E) gene, were assigned to the recently described M phenotype; an inducible MLS resistance (iMLS) phenotype was
not found. The lack of inducible resistance to clindamycin was
confirmed by determining clindamycin MICs without and with pre-exposure
to subinhibitory concentrations of erythromycin. In macrolide MIC and
MIC-induction tests, whereas homogeneous susceptibility patterns were
observed among the 20 strains assigned to the M phenotype by the
double-disk test, two distinct patterns were recognized among the 65 strains assigned to the cMLS phenotype by the same test; one pattern
(n = 10; probably that of the true cMLS isolates) was
characterized by resistance to rokitamycin also without induction, and
the other pattern (n = 55; designated the iMcLS
phenotype) was characterized by full or intermediate susceptibility to
rokitamycin without induction turning to resistance after induction,
with an MIC increase by more than three dilutions. A triple-disk test,
set up by adding a rokitamycin disk to the erythromycin and clindamycin
disks of the double-disk test, allowed the easy differentiation not
only of pneumococci with the M phenotype from those with MLS resistance
but also, among the latter, of those of the true cMLS phenotype from
those of the iMcLS phenotype. While distinguishing MLS from M
resistance in pneumococci is easily and reliably achieved, the
differentiation of constitutive from inducible MLS resistance is far
more uncertain and is strongly affected by the antibiotic used to test inducibility.
 |
INTRODUCTION |
Ribosomal target site modification
due to methylases encoded by erm class genes is the most
common and extensively investigated mechanism of erythromycin
resistance in streptococci (28). It has long been known
that ribosome methylation causes reduced binding of and coresistance to
macrolide, lincosamide, and streptogramin B (MLS) antibiotics and that
in streptococci MLS resistance can be expressed either constitutively
(cMLS phenotype) or inducibly (iMLS phenotype) (9, 12,
27). Only recently has a macrolide efflux mechanism been
described for streptococci (24), in which it is associated
with a new resistance pattern (M phenotype) characterized by resistance
to 14- and 15-membered macrolides and susceptibility to 16-membered
macrolides, lincosamides, and streptogramin B (21, 24).
While M resistance is similar in Streptococcus pyogenes and
Streptococcus pneumoniae, being mediated in both species by
similar determinants
mef(A) (4) and
mef(E) (26), respectively, recently recommended
to be considered a single gene, mef(A)
(18)
encoding similar membrane proteins responsible for
the macrolide efflux, MLS resistance appears to be more varied. From a
genotypic point of view, in S. pyogenes MLS resistance is
mediated by two classes of methylase genes, i.e., the conventional
erm(AM) determinant (12), belonging to gene
class erm(B) (18), and the recently described
erm(TR) determinant (22), belonging to gene
class erm(A) (18). In S. pneumoniae,
only the former methylase gene has been extensively documented
(12, 24), even though the presence of
erm(TR) has been recently demonstrated in particular isolates of erythromycin-resistant pneumococci (3, 25).
From a phenotypic point of view, erythromycin-resistant strains of S. pyogenes can be differentiated into three phenotypes
(cMLS, iMLS, and M) by a simple double-disk (erythromycin plus
clindamycin) test (21) or
as easily but more
accurately
into five phenotypes by a triple-disk (erythromycin plus
clindamycin and josamycin) test, which allows further differentiation
of inducibly resistant strains into three distinct types (iMLS-A,
iMLS-B, and iMLS-C) (8). Furthermore, in S. pyogenes the erm(AM) determinant can be associated with
both constitutive (cMLS phenotype) and inducible (iMLS-A phenotype)
resistance, whereas the erm(TR) determinant is usually
associated with inducible resistance (iMLS-B and iMLS-C phenotypes)
(8). By contrast, the discrimination between constitutive and inducible MLS resistance in S. pneumoniae strains is
uncertain, and laboratory differentiation of macrolide resistance
phenotypes is poorly standardized.
In this study, several clinical isolates of erythromycin-resistant
S. pneumoniae were tested for the resistance phenotype by
comparing results of erythromycin-clindamycin double-disk (ECDD) tests
used as in erythromycin-resistant S. pyogenes strains and MIC induction tests, i.e., by determining the MICs of some MLS antibiotics without and with pre-exposure to a subinhibitory
concentration of erythromycin.
(Part of these data were presented at the 40th Interscience Conference
on Antimicrobial Agents and Chemotherapy, Toronto, Canada, 17 to 20 September 2000.)
 |
MATERIALS AND METHODS |
Bacterial strains.
A total of 85 clinical isolates of
erythromycin-resistant S. pneumoniae were collected from
several Italian laboratories between September 1998 and June 2000. Multiple isolates from the same patient were avoided. Strain
identification was confirmed in our laboratory by conventional
laboratory tests such as susceptibility to optochin and solubility in
bile (20) and by using the API system (bioMérieux,
Marcy-I'Etoile, France). Erythromycin resistance (MIC
1 µg/ml) was also confirmed in our laboratory by the broth microdilution method (see below).
ECDD test.
The ECDD test was carried out by a modification
(i.e., using commercial disks) of the assay described by
Seppälä et al. (21) for S. pyogenes
strains. Disks (Oxoid Ltd., Basingstoke, United Kingdom) of
erythromycin (15 µg) and clindamycin (2 µg) were placed 15 to 20 mm
apart on Mueller-Hinton agar (BBL Microbiology Systems, Cockeysville,
Md.) supplemented with 5% sheep blood, which had been inoculated with
a swab dipped into a bacterial suspension with a turbidity equivalent
to that of a 0.5 McFarland standard. After 18 h of incubation at
37°C, the absence of a zone of inhibition around the two disks
indicated constitutive resistance (cMLS phenotype): blunting of the
clindamycin zone of inhibition proximal to the erythromycin disk
indicated inducible resistance (iMLS phenotype); and susceptibility to
clindamycin with no blunting of the zone of inhibition around the
clindamycin disk indicated the M phenotype.
Antibiotics.
Erythromycin and clindamycin were purchased
from Sigma Chemical Co. (St. Louis, Mo.). The other antibiotics were
obtained from the following sources: clarithromycin, Abbott
Laboratories (Abbott Park, Ill.); azithromycin, Pfizer Inc. (New York,
N.Y.); josamycin, ICN Biomedicals (Costa Mesa, Calif.); and
rokitamycin, Prodotti Formenti (Milan, Italy).
Susceptibility tests.
MICs were determined by the broth
microdilution method according to the procedure recommended by the
National Committee for Clinical Laboratory Standards (NCCLS)
(14). Mueller-Hinton II broth (BBL) supplemented with 3%
lysed horse blood was used as the test medium. The antibiotics were
tested at final concentrations (prepared from twofold dilutions) that
ranged from 0.015 to 128 µg/ml. S. pneumoniae ATCC 49619 was used for quality control. The MIC breakpoints suggested by the
NCCLS (14) were used for erythromycin, clindamycin, and
clarithromycin (susceptible,
0.25 µg/ml; intermediate, 0.5 µg/ml;
resistant,
1 µg/ml) and for azythromycin (susceptible,
0.5
µg/ml; intermediate, 1 µg/ml; resistant,
2 µg/ml), and those
suggested by the French Society for Microbiology (5) for
16-membered macrolides were used for josamycin and rokitamycin
(susceptible,
1 µg/ml; intermediate, 2 µg/ml; resistant,
4
µg/ml).
Induction of MLS resistance (MIC induction tests).
Induction
of MLS resistance was evaluated by pregrowth (3 h at 37°C) in
erythromycin at a subinhibitory concentration (0.05 µg/ml). As
described previously (8), the culture was then washed, and
the cells were used to prepare the inoculum for MIC testing by the
usual broth microdilution method.
Detection of erythromycin resistance genes.
The presence of
erythromycin resistance genes was investigated by PCR. Primer pairs
specific for the detection of erm(AM) and mef(E)
(expected PCR product sizes, 639 and 348 bp, respectively) were as
reported by Sutcliffe et al. (23). The primers designated III8 and III10 by Seppälä et al.
(22) were used to detect the erm(TR) gene
(expected PCR product size, 208 bp). DNA preparation and amplification
and electrophoresis of PCR products were carried out by established
procedures (10, 22, 23).
 |
RESULTS |
ECDD test.
All 85 erythromycin-resistant S. pneumoniae strains studied were tested using the ECDD assay; 65 (76.5%) were assigned to the cMLS phenotype and 20 (23.5%) to the M
phenotype (Table 1). Inducibly resistant
isolates (iMLS phenotype) were not found by this method.
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TABLE 1.
Macrolide resistance phenotype in 85 clinical isolates of
erythromycin-resistant S. pneumoniae by the ECDD test and
correlations with clindamycin susceptibility and erythromycin
resistance genes
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|
Clindamycin MIC induction tests.
The lack of inducible
resistance to clindamycin was confirmed by MIC induction tests, by
determining clindamycin MICs without and with pre-exposure to 0.05 µg
of erythromycin per ml. All the isolates assigned to the cMLS phenotype
by the ECDD test were found to be clindamycin resistant both without
(MICs, 8 to >128 µg/ml) and with (MICs, 16 to >128 µg/ml)
induction, whereas those assigned to the M phenotype remained equally
susceptible under both conditions (MIC range, 0.03 to 0.12 µg/ml in
both instances) (Table 1).
Erythromycin resistance genes.
All strains identified as
having the cMLS phenotype by the ECDD test had the erm(AM)
gene, whereas all those identified as having the M phenotype had the
mef(E) gene; no strain showed both erm(AM) and
mef(E) (Table 1). No strain had the erm(TR) gene.
Macrolide MICs and MIC-induction tests.
The MICs of two
14-membered (erythromycin and clarithromycin), one 15-membered
(azithromycin), and two 16-membered (josamycin and rokitamycin)
macrolides were determined and compared (Table 2). Homogeneous susceptibility patterns
were observed in the 20 strains assigned to the M phenotype by the ECDD
test; all these isolates were resistant to the 14- and 15-membered
macrolides (with MICs not exceeding 16 µg/ml for erythromycin and
clarithromycin and 32 µg/ml for azithromycin) and susceptible to the
16-membered macrolides. By contrast, heterogeneous susceptibility
patterns were observed among the 65 strains assigned to the cMLS
phenotype by the ECDD test; all these isolates were resistant (with
widely variable MIC levels) to the 14- and 15-membered macrolides,
whereas the MICs of josamycin and rokitamycin ranged from
susceptibility (0.5 and 0.06 µg/ml, respectively) to high-level
resistance (>128 µg/ml).
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TABLE 2.
Susceptibility to macrolides of 85 clinical isolates of
erythromycin-resistant S. pneumoniae, subdivided into
macrolide resistance phenotypes by the ECDD test
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|
Josamycin and rokitamycin MICs were also determined after induction
with erythromycin by the pregrowth procedure used for
clindamycin
(Table
2). While the susceptibilities of the 20 M
phenotype isolates
were substantially unaffected by induction,
all 65 cMLS strains were
found to be resistant, although at variable
levels, to both josamycin
(MIC range, 16 to >128 µg/ml) and rokitamycin
(MIC range, 4 to >128
µg/ml) after
induction.
Altogether, two distinct patterns of macrolide resistance were
recognized among the 65 isolates assigned to the cMLS phenotype
by the
ECDD test (Table
3); one, observed in 10 isolates (15.4%),
was characterized by resistance to rokitamycin also
without induction
(MICs,

4 µg/ml), and the other, observed in 55 isolates (84.6%),
by full or intermediate susceptibility to
rokitamycin without
induction (MICs,

2 µg/ml) turning to resistance
after induction
(MICs, 4 to >128 µg/ml), with an MIC increase of
more than three
dilutions. The first pattern was also characterized by
high-level
resistance to the 14- and 15-membered macrolides (MICs,

128 µg/ml)
and to josamycin (MIC range, 32 to >128 µg/ml) also
without induction;
the second pattern was also characterized by
variable-level resistance
to the 14- and 15-membered macrolides and by
susceptibility to
moderate resistance to josamycin without induction
(MIC range,
0.5 to 32 µg/ml) turning to uniform, mostly high-level
resistance
after induction.
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TABLE 3.
Susceptibility to MLS antibiotics of 65 clinical isolates
of erythromycin-resistant S. pneumoniae, all identified as
cMLS phenotype by the ECDD test and differentiated into cMLS and
iMcLS types on the basis of macrolide MICs and MIC-induction
tests
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|
Triple-disk test.
In order to easily differentiate, within
erythromycin-resistant pneumococci, not only the isolates of the M
phenotype from those with MLS resistance but also, among the latter,
cMLS from iMcLS isolates, a triple-disk test was set up by adding a
rokitamycin disk (30 µg; BBL) to the erythromycin and clindamycin
disks of the conventional ECDD test. The erythromycin disk was placed
at the center of the agar plate with the clindamycin and rokitamycin disks placed 15 to 20 mm apart on either side. All strains were tested
by this triple-disk (ECRTD) assay. The iMcLS strains (Fig. 1B) were characterized by no significant
zone of inhibition around either the erythromycin or the clindamycin
disk, in line with their resistance to both drugs, but presented a zone
of inhibition around rokitamycin that was blunted on the side proximal
to the erythromycin disk, in line with the inducibility of their
rokitamycin resistance. By the ECDD test (Fig. 1E) these strains would
be identified as cMLS, no clindamycin zone of inhibition being
appreciable. The true cMLS phenotype (Fig. 1A and D), characterized by
the absence of a significant zone of inhibition around the three disks, and the M phenotype (Fig. 1C and F), characterized by susceptibility to
clindamycin and rokitamycin with no blunting of the relevant zones of
inhibition, were identified by the ECRTD test as easily as by the ECDD
test.

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FIG. 1.
Phenotypes of erythromycin-resistant pneumococci as
determined in representative strains by the ECRTD and the ECDD tests.
In the ECRTD test (A to C), the erythromycin disk (15 µg each) is at
the center in each panel, with the clindamycin disk (2 µg each) on
the right and the rokitamycin disk (30 µg each) on the left. In the
ECDD test (D to F), the erythromycin disk is on the left and the
clindamycin disk on the right in each panel. A and D, cMLS phenotype; B
and E, iMcLS phenotype; C and F, M phenotype.
|
|
 |
DISCUSSION |
The predominance among erythromycin-resistant pneumococci of the
isolates carrying the erm(AM) gene over those carrying the mef(E) gene observed in this study (76.5 versus 23.5%) is
consistent with the results of other recent studies from European
countries (2, 3, 13, 16, 25), South Africa
(11), and Japan (15). It is worth noting that
in some European reports the rate of isolates carrying the
mef(E) gene was particularly low (<10%) (2, 3, 13,
16). The newly described erm(TR) gene
(22), so far investigated more extensively in
S. pyogenes than in S. pneumoniae isolates,
was not detected in any of our erythromycin-resistant pneumococci. Very
recently, a similar negative finding has been documented in France
(2), whereas one pneumococcus carrying both
erm(TR) and erm(B) has been reported in Spain
(3), and erm(TR) was the only resistance
determinant detected in 2.9% of the erythromycin-resistant pneumococci
surveyed in a Greek study (25).
On the other hand and of more interest, the results of this study
indicated that, while distinguishing MLS from M resistance in
pneumococci is easily and reliably achieved, the differentiation between constitutive and inducible MLS resistance is far more uncertain
and is strongly affected by the antibiotic used to test inducibility.
The ECDD test, conventionally used to identify three resistance
phenotypes (cMLS, iMLS, and M) among erythromycin-resistant strains of
S. pyogenes, appears to be less applicable to
erythromycin-resistant pneumococci because in this test the
constitutive or inducible character of MLS resistance is inferred from
the response to clindamycin. Among S. pyogenes strains, the
cMLS phenotype is associated with resistance to clindamycin without
induction, whereas the iMLS phenotype is associated with susceptibility
to clindamycin without induction, turning to high-level resistance
after induction; of course, susceptibility to clindamycin without
induction is shared by M phenotype isolates, which also however remain
clindamycin susceptible after induction (8, 21). Among
pneumococci, on the other hand, susceptibility to clindamycin is
characteristic of the strains of the M phenotype, carrying the
mef(E) gene but not of those with MLS resistance, carrying
the erm(AM) gene, which, as a rule, also are clindamycin
resistant without induction. As reported previously (6),
possible false susceptibilities produced by the NCCLS microdilution
method in the detection of pneumococcal resistance to clindamycin can
be corrected by the extension of incubation time to 48 h,
incubation in CO2, or the use of a disk diffusion method.
Therefore, pneumococci with MLS resistance when tested by the ECDD
assay are almost invariably, as in the present study, assigned to the
cMLS phenotype (3, 7, 11, 13, 17, 24).
The fact that inducible resistance to clindamycin is not usually
encountered in pneumococci is unlikely to mean that MLS resistance is
only constitutively expressed in these organisms. Indeed, 16-membered macrolides, which are particularly effective in vitro against streptococci, including some erythromycin-resistant isolates (12, 21), appear to be better suited than lincosamides to the
detection of inducible MLS resistance in pneumococci. This applies
especially to rokitamycin, which has more powerful antipneumococcal
activity in vitro than other 16-membered macrolides (15)
and has actually been used in the past to tentatively distinguish
inducible from constitutive MLS resistance in pneumococci (1, 15,
19).
Among the S. pneumoniae isolates with MLS resistance
[genotypically characterized by the erm(AM) gene and
usually assigned to the cMLS phenotype based on the ECDD test], those
also resistant to rokitamycin without induction are likely to represent
the veritable cMLS phenotype, whereas those becoming rokitamycin
resistant only after induction are in fact likely to represent an iMLS
phenotype. We designated the latter type as iMcLS to underline that
inducibility regards macrolides (particularly 16-membered ones, with
emphasis on rokitamycin) but not lincosamides, to which these strains
are resistant also without induction (we have as yet no data about group B streptogramins). A triple-disk ECRTD test, set up by adding a
rokitamycin disk to the erythromycin and clindamycin disks of the ECDD
test, allowed easy differentiation not only of the pneumococci of the M
phenotype from those with MLS resistance, but also, among the latter,
of those of a narrower but probably truer cMLS phenotype from those of
the iMcLS phenotype.
In any case, the meaning of inducible MLS resistance appears to be
different in S. pneumoniae from that in S. pyogenes. Further investigations are warranted to better
understand the underlying mechanisms.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Institute of
Microbiology, University of Ancona Medical School, Via Ranieri, Monte d'Ago, 60131 Ancona, Italy. Phone: 39 71 2204694. Fax: 39 71 2204693. E-mail: pe.varaldo{at}popcsi.unian.it.
 |
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Journal of Clinical Microbiology, April 2001, p. 1311-1315, Vol. 39, No. 4
0095-1137/01/$04.00+0 DOI: 10.1128/JCM.39.4.1311-1315.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
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