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Journal of Clinical Microbiology, April 2001, p. 1360-1367, Vol. 39, No. 4
0095-1137/01/$04.00+0 DOI: 10.1128/JCM.39.4.1360-1367.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Comparison of the E-test with the NCCLS M38-P
Method for Antifungal Susceptibility Testing of Common and Emerging
Pathogenic Filamentous Fungi
Ana
Espinel-Ingroff*
Division of Infectious Diseases, Medical
College of Virginia of Virginia Commonwealth University, Richmond,
Virginia 23298-0049
Received 21 August 2000/Returned for modification 22 November
2000/Accepted 29 January 2001
 |
ABSTRACT |
The National Committee for Clinical Laboratory Standards (NCCLS)
M38-P method describes standard parameters for testing the fungistatic
antifungal activities (MICs) of established agents against filamentous
fungi (molds). The present study evaluated the in vitro fungistatic
activities of itraconazole and amphotericin B by the E-test and the
NCCLS M38-P microdilution method against 186 common and emerging
pathogenic molds (123 isolates of Aspergillus spp. [five
species], 16 isolates of Fusarium spp. [two species], 4 Paecilomyces lilacinus isolates, 5 Rhizopus
arrhizus isolates, 15 Scedosporium spp., 18 dematiaceous fungi, and 5 Trichoderma longibrachiatum
isolates). The agreement between the methods for amphotericin B MICs
ranged from 70% for Fusarium solani to
90% for most of
the other species after the first reading; agreement was dependent on
both the incubation time and the species being evaluated. Major
discrepancies between the amphotericin B MICs determined by the E-test
and the NCCLS M38-P method were demonstrated for three of the five
species of Aspergillus tested and the two species of
Fusarium tested. This discrepancy was more marked after 48 h of incubation; the geometric mean MICs determined by the E-test increased between 24 and 48 h from between 1.39 and 3.3 µg/ml to between 5.2 and >8 µg/ml for Aspergillus flavus,
Aspergillus fumigatus, and Aspergillus nidulans. The
agreement between the itraconazole MICs determined by the E-test and
the NCCLS M38-P method ranged from 83.3% for A. nidulans
to
90% for all the other species tested; the overall agreement was
higher (92.7%) than that for amphotericin B (87.9%). The agreement
was less dependent on the incubation time. Clinical trials need to be
conducted to establish the role of the results of either the E-test or
the NCCLS M38-P method in vitro for molds with the two agents as
predictors of clinical outcome.
 |
INTRODUCTION |
A higher incidence of fungal
infections has been documented since the 1980s with the parallel
emergence of either new fungal pathogens or fungi that were considered
nonpathogenic as etiologic agents of systemic disease, especially in
the immunocompromised host (2, 4, 8, 16, 27, 28, 31).
Although the volume of disseminated infections caused by the
filamentous fungi (molds) is lower than that caused by yeasts, their
higher incidence and the increased resistance of molds to established
antifungal agents (2, 4, 9, 10, 14-16, 18, 27, 31)
warrant the evaluation of the in vitro susceptibilities of these fungi to both established and investigational agents. Aspergillus
fumigatus is responsible for the majority (85 to 90%) of the
different clinical manifestations of severe mold infections
(9). However, other Aspergillus spp.,
Fusarium spp., Scedosporium apiospermum
(Pseudallescheria boydii), Scedosporium prolificans, and
less common molds have become important emerging pathogens (2, 4,
15, 18, 27, 28).
The National Committee for Clinical Laboratory Standards (NCCLS)
Subcommittee on Antifungal Susceptibility Tests has proposed standard
procedures for the antifungal susceptibility testing of molds (NCCLS
M38-P document [22]). On the basis of data from several
studies (12, 13), this document recommends the use of (i)
standard RPMI 1640 broth; (ii) nongerminated conidial inoculum suspensions of approximately 104 CFU/m1; and (iii)
incubation at 35°C for 24 h (Rhizopus spp.), 48 h
(Aspergillus spp., Fusarium spp., and other
opportunistic molds), and 72 h (S. apiospermum). The
determination of MICs according to the instructions in the NCCLS M38-P
document requires the visual examination of growth inhibition
compared to the growth for the growth control (22).
Some degree of correlation has been documented between the
results of the M38-P method and treatment outcomes in experimental
infections (24); however, the clinical value of the NCCLS
methods for the testing of molds needs to be established.
The NCCLS methods are cumbersome and time-consuming, and alternative
methods have been evaluated in recent years for testing of yeasts.
Among these procedures, the E-test has been suggested as an alternative
approach for the antifungal susceptibility testing of yeasts (11,
21, 25, 32), and more recently, this method has been evaluated
for the antifungal susceptibility testing of certain molds
(30). Good levels of agreement between the E-test and
NCCLS methods have been demonstrated in these studies. The present
study evaluated the activities of itraconazole and amphotericin B by
the E-test against 186 common and emerging pathogenic molds recovered
from clinical specimens during the last 5 years. The MICs obtained by
the E-test were compared to those obtained by the proposed NCCLS M38-P
broth microdilution method for filamentous fungi (22).
(This work was partially presented at the 96th General Meeting of the
American Society for Microbiology 1996, 19 to 23 May 1996, New Orleans,
La., and the 38th Interscience Conference on Antimicrobial Agents and
Chemotherapy, 24 to 27 September 1998, San Diego, Calif.)
 |
MATERIALS AND METHODS |
Isolates.
The set of 186 isolates evaluated included
Aspergillus flavus (16 isolates), A. fumigatus
(69 isolates), Aspergillus nidulans (12 isolates),
Aspergillus niger (10 isolates), Aspergillus
terreus (16 isolates), Fusarium oxysporum (6 isolates),
Fusarium solani (10 isolates), Paecilomyces
lilacinus (4 isolates), Rhizopus arrhizus (5 isolates),
S. apiospermum (10 isolates), S. prolificans (5 isolates), Trichoderma longibrachiatum (5 isolates), and 18 dematiaceous molds (one to three isolates each of Bipolaris
spp., Cladophialophora bantiana, Cladophialophora
cladosporioides, Dactylaria constricta var. gallopava,
Phaeoacremonium parasiticum [Phialophora parasitica], and Wangiella dermatitidis). Each isolate originated from a
different patient and was received at the Medical Mycology Research
Laboratory, Medical College of Virginia, Virginia Commonwealth
University, for MIC testing during the last 5 years. Isolates were
maintained at
70°C until testing was performed. The reference
isolate A. flavus ATCC 204304 (22) and the
quality control (QC) strain Candida parapsilosis ATCC 22019 (23) were included as control isolates for both the NCCLS
and the E-test methods. For the latter strain, microdilution MIC ranges
of the agents evaluated in the study as well as preliminary QC ranges
for the E-test are well established (3, 11). Reference MIC
ranges have also been established for A. flavus ATCC 204304 on the basis of repeated testing in a prior study (13),
and these values are listed in the M38-P document (22).
MIC ranges for the QC and reference isolates were within established
values by both methods (3, 11, 22, 23).
Antifungal agents.
The E-test gradient strips of
amphotericin B and itraconazole were provided by the manufacturer (AB
BIODISK, Solna, Sweden). The concentration gradient for each drug
ranged from 0.004 to 32 µg/ml. The strips were stored at
20°C
until the day on which the test was performed. Amphotericin B
(Bristol-Myers Squibb Pharmaceutical Research Institute, Wallingford,
Conn.) and itraconazole (Janssen Pharmaceutica, Titusville, N.J.) were
provided by the manufacturers as assay powders. As described in the
NCCLS M38-P document (22), additive drug dilutions were
prepared at 100 times the final concentrations in 100% dimethyl
sulfoxide, followed by further dilutions (1:50) in the NCCLS standard
RPMI 1640 medium to yield two times the final strength required for the
test. The drugs were frozen at
70°C at their final concentrations
(8 to 0.0078 µg/ml) for testing by the M38-P method until they were needed.
Inoculum preparations.
Stock inoculum suspensions were
prepared as described in the NCCLS M38-P document (22)
from 7-day-old cultures grown on potato dextrose agar slants at 35°C,
and the suspensions were adjusted spectrophotometrically to optical
densities that ranged from 0.09 to 0.3 at 530 nm (82 to 60%
transmittance); the stock suspensions contained mostly conidia. The
final sizes of the stock inoculum suspensions of most of the isolates
tested ranged from 0.5 × 106 to 4.5 × 106 CFU/ml, as demonstrated by quantitative colony counts
on Sabouraud dextrose agar. The densities of Bipolaris sp.
stock inoculum suspensions were lower (2 × 105 to
7 × 105 CFU/ml). The nongerminated conidial inoculum
suspensions were diluted 1:50 in medium for testing by the M38-P method.
E-test pilot study.
During an earlier investigation for
testing of yeasts (11), several medium formulations were
evaluated in order to identify the optimal medium for MIC determination
by the E-test. In the present study, a pilot study was conducted with
three media with a small sample of the 186 mold isolates evaluated.
MICs were obtained by the E-test for the 30 isolates listed in Table 1
(single test runs) with three medium formulations: (i) solidified
(1.5%) RPMI 1640 medium with 2% dextrose (RPMI-agar), (ii) solidified
antibiotic medium 3 (M-3 agar), and (iii) Casitone agar (Remel Inc.,
Lenexa, Kans.). Since the MICs obtained with the three media were
comparable for the 30 isolates and both antifungal agents tested (see
Table 1), the remaining 156 molds were tested only with the RPMI-agar. The latter medium is a more chemically defined medium than the other
two and is less subject to lot-to-lot variation.
E-test procedure.
The E-test was performed by following the
manufacturer's instructions. Each solidified medium was inoculated by
dipping a nontoxic (latex-free) sterile swab into the respective
undiluted stock inoculum suspension and evenly streaking it in three
directions over the entire surface of a 150-mm petri plate containing
60 ml of medium; the swab was dipped into the inoculum suspension each
time that the agar surface was streaked when isolates of Bipolaris spp. were tested. The agar surface was allowed to
dry for 15 min, and the strips were placed onto the inoculated agar. As
described above, C. parapsilosis ATCC 22019 and A. flavus ATCC 204304 were tested each time that a set of isolates
was evaluated. The plates were incubated at 35°C, and the MICs were
determined following incubation for 24 h to 4 days. The MICs
determined by the E-test were the lowest drug concentrations at which
the border of the elliptical inhibition intercepted the scale on the
antifungal strip (see Fig. 1 and 2).
NCCLS broth microdilution method (M38-P document).
On the
day of the test, each microdilution well that contained 100 µl of the
diluted (two times) drug concentrations was inoculated with 100 µl of
the diluted (two times) conidial inoculum suspensions (final volume in
each well, 200 µl). Growth and sterility controls were included for
each isolate tested. As described above, C. parapsilosis
ATCC 22019 and A. flavus ATCC 204304 were tested each time
that a set of isolates was evaluated. Microdilution trays were
incubated at 35°C and examined at 48 h for MIC determination; MICs
for S. apiospermum were determined after 72 h of
incubation, and those for C. bantiana were determined on day
4. The MICs were determined by the visual inspection of growth
inhibition as described in the NCCLS M38-P document (22)
and corresponded to complete growth inhibition.
Data analyses.
Because the E-test strips contain a
continuous gradient instead of the established twofold drug dilution
schema, MICs determined by the E-test were elevated to the next twofold
dilution concentration, which matched the drug dilution schema of the
NCCLS M38-P method (8 to 0.0078 µg/ml). This elevation of MICs for
the E-test facilitated the comparisons and presentation of results.
Both on-scale and off-scale MICs were included in the analysis. As
analyzed previously (11, 13), discrepancies between the
MIC endpoints of no more than 3 dilutions (e.g., 0.5, 1.0, and 2 µg/ml) were used for calculation of the percent agreement. The MICs
and MIC ranges determined by the E-test and the NCCLS M38-P method and
the corresponding geometric mean values were obtained for each
species-drug combination tested. For both the E-test and the NCCLS
M38-P method, the MICs for 90% of the isolates tested
(MIC90s) were determined for species for which
10
isolates were available; MICs for 50% of the isolates tested were
obtained for species represented by less than 10 isolates.
 |
RESULTS |
E-test pilot study.
Because optimal medium conditions had not
been investigated for susceptibility testing of molds by the E-test
when the present study was initiated, three medium formulations were
evaluated with the first 30 mold isolates that were tested. The results for amphotericin B and itraconazole by the E-test with the three media
were the same or no more than 2 dilutions different for the
representative isolates of each species listed in Table
1. However, the inhibition ellipses were
narrower with RPMI-agar than with M-3 agar, especially for A. flavus. The trailing effect was a major problem only for testing
of some R. arrhizus isolates with itraconazole. Therefore,
the MIC data obtained with the RPMI-agar for 25 of the 30 molds tested
in the pilot study were incorporated into the data presented in Table
2, and the comparative evaluation was
continued by using only RPMI-agar for the E-test. Only one other
isolate of R. arrhizus was received in the Medical Mycology Research Laboratory for MIC testing during the last 3 years, and the
results obtained by both procedures were similar to those presented in
Table 1.
Comparison of amphotericin B MICs obtained by the E-test and the
NCCLS M38-P method.
Although the inhibition ellipses for
amphotericin B were clear and well defined, they were usually narrower
than those for itraconazole for most isolates (Fig.
1 and 2),
especially after the second reading. The agreement between the methods
for amphotericin B MICs ranged from 70% for F. solani to
90% for most of the other species after the first reading; agreement
was dependent on both the incubation time and the species being
evaluated (Table 3). Major discrepancies between the amphotericin B MICs determined by the
E-test and the NCCLS M38-P method were demonstrated for three of the
five species of Aspergillus tested and the two species of
Fusarium tested, for which wider and higher MICs were
obtained by the E-test (Table 2). This discrepancy was more marked
after 48 h of incubation; the geometric mean MICs obtained by the
E-test increased between 24 and 48 h from between 1.39 and 3.3 µg/ml to between 5.2 and >8 µg/ml for A. flavus, A. fumigatus, A. nidulans, and F. oxysporum. The percent
agreements were also substantially lower after 48 h of incubation
than after 24 h of incubation for four of the five species of
Aspergillus tested and F. solani (Table 3). The
agreement between the amphotericin B MICs obtained by the two methods
was good for the dematiaceous molds and other species evaluated.

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FIG. 1.
Itraconazole and amphotericin B MICs at 48 h for
A. fumigatus (top left), A. terreus (top right),
and A. flavus (bottom), as determined by the E-test.
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FIG. 2.
Amphotericin B MICs for one isolate of Aspergillus
flavus: MIC at 24 h, 0.5 µg/ml (left); MIC at 48 h, 8 µg/ml (right).
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TABLE 3.
Distribution of differences in MICs for 181 molds and
percent agreement within 3 dilutions for the E-test and the NCCLS
M38-P method
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Comparison of itraconazole MICs obtained by the E-test and the
NCCLS M38-P method.
A major problem with antifungal susceptibility
testing of yeasts with azole compounds is the trailing effect, which is
due to the concentration-dependent partial inhibition of fungal growth. When one is performing the E-test procedure, microcolonies around or
inside the entire inhibition ellipse are observed with trailing MICs
for certain yeasts. It has been demonstrated that the trailing effect
can be minimized in the testing of yeasts by the use of either
RPMI-agar or Casitone agar (11). In the present study trailing was not a major problem, as it was when Candida
spp. and other yeasts were tested. In addition, there was no apparent medium dependence, as demonstrated by the results for the 30 isolates that were tested on the three agars. E-test inhibition ellipses for
itraconazole were as clear and well-defined as those for amphotericin B
for most of the isolates tested (Fig. 1). Small colonies were observed
inside the inhibition ellipses (trailing effect) for some isolates of
F. oxysporum, P. lilacinus, and R. arrhizus; ellipses for some of these isolates were also narrow. The agreement between the itraconazole MICs obtained by the E-test and the NCCLS M38-P method ranged from 83.3% for A. nidulans and the
dematiaceous fungi to
90% for all the other species tested; the
overall agreement was higher (92.7%) than that for amphotericin
B (87.9%) (Table 3). In contrast to the MICs of amphotericin B, the
itraconazole MICs determined by the E-test either had no change or
shifted very little between the two incubation times evaluated for most of the species (Table 2). The exception was A. fumigatus,
because more discrepant MICs (>2 dilutions) were found between the two methods at 48 h (18 isolates) than at 24 h (18 isolates)
(Table 3).
 |
DISCUSSION |
In the present study, the percent agreement between the results of
the two methods for amphotericin B was lower (<80%) for A. flavus, A. terreus, and the two Fusarium spp. Low
levels of agreement (60 to 80%) between the results of the E-test and
a microdilution method have previously been reported for A. flavus and F. solani (30). However, the
investigators did not evaluate isolates of either A. nidulans or F. oxysporum. Also, MICs determined by the
E-test were read only after 48 h of incubation in that study. On
the basis of the level of agreement between the two methods in the
present study, it appears that amphotericin B MICs for
Aspergillus spp. should be determined by the E-test as soon as sufficient growth allows it (before 48 h). However, which of the two incubation times is providing the most clinically relevant MICs
by the E-test? Although the conventional form of amphotericin B remains
the drug of choice for the treatment of life-threatening fungal
infections, its clinical efficacy is suboptimal in the immunocompromised host (10). In several studies (5,
17, 20, 26), death was attributed to disseminated aspergillosis in 27 of 62 patients, despite adequate treatment with amphotericin B
(10). In the report of one of those studies
(17), six of the seven patients whose cause of death was
attributed to disseminated aspergillosis were infected with A. flavus. In the present study, the disagreement between the two
methods was higher for A. flavus than for the other
Aspergillus spp. tested (Table 3). The reason was that the
MIC determined by the E-test shifted from
1.0 to
8 µg/ml (Fig. 2)
for 4 of the 16 isolates of A. flavus tested and MICs were 2 to >8 µg/ml for the other isolates tested. Clinical resistance of
this species to amphotericin B has been reported; unfortunately, the
MICs for the infecting isolates were not reported (5, 17, 20,
26). It is noteworthy that the E-test appeared to be superior to
the NCCLS method for yeasts (23) in its ability to detect
amphotericin B-resistant Candida spp. and Cryptococcus neoformans strains (6, 21, 32). Further studies are
needed to evaluate the correlation of the MICs determined by the E-test and those determined by the NCCLS M38-P method with in vivo outcome in
experimental infections or clinical trials.
It has been suggested that amphotericin B MICs are not good predictors
of the clinical response to treatment with this agent in patients with
disseminated fusarial infections. In 56 of 73 patients who failed
amphotericin B therapy for disseminated fusarial infection, the MICs
for the infecting isolates were indiscriminately low (
1.0 µg/ml) or
high (
2 µg/ml) (2, 16). However, in vitro testing was
performed in those studies by using nonstandardized procedures. In
addition, the status of the host and the degree of tissue involvement
are also important in predicting the clinical outcome of therapy in
patients with fusarial and other opportunistic infections. The
amphotericin B MIC90s for F. solani determined by the E-test in the present evaluation and in the study of Szekely et
al. (30) were
8 µg/ml. Again, the clinical relevance
of the MICs for molds determined by both methods need to be established in clinical trials with standardized methods for in vitro testing.
The most important role of antifungal susceptibility testing is
detection of isolates potentially resistant to the agent being evaluated. High amphotericin B MICs were obtained by both methods for
most isolates of P. lilacinus and Scedosporium
spp. (MIC90s, 4 to >8 µg/ml) and some isolates of
A. terreus. The agreement between the two methods was
excellent for the first three species and low for A. terreus
(Table 3). In contrast, Szekely et al. (30) reported a
20% agreement between the two methods for Scedosporium spp.
and an excellent agreement for A. terreus by following a procedure similar to the M38-P method (22). In their
study, they prepared drug dilutions directly in RPMI 1640 broth instead of the solvent. The recent published literature regarding the results
of in vitro and clinical studies indicates that the amphotericin B MICs
for these four species are usually high and that infections caused by
these molds are refractory to treatment with amphotericin B (1,
7, 8, 15, 18, 19, 29).
Although the NCCLS M38-P document states that azole MICs are the lowest
concentrations that show a 50% inhibition of growth compared to the
growth for the control, recent data developed by an NCCLS subcommittee
suggest that the conventional criterion of MIC determination (100% or
complete growth inhibition) could more clearly and reliably detect
azole resistance (A. Espinel-Ingroff, M. S. Bartlett, V. Chaturvedi, K. Hazen, M. A. Ghannoum, M. A. Pfaller, M. G. Rinaldi, and T. J. Walsh, unpublished data). Because of that,
the values depicted in Table 2 were obtained by using the 100%
inhibition criterion for MIC determination. Furthermore, most
itraconazole concentrations resulting in 50% inhibition (not shown in
Table 2) were only 1 to 2 dilutions lower than the corresponding concentrations causing 100% inhibition.
In the present study, the overall agreement between the two methods was
higher for itraconazole (92.7%) than for amphotericin B (87.9%).
Similar but lower levels of agreement (71% for amphotericin B versus
88% for itraconazole) were reported in another evaluation of the
E-test for susceptibility testing of Aspergillus spp., F. solani, Scedosporium spp., and W. dermatitidis
(30). The set of A. fumigatus isolates
evaluated included four isolates for which high itraconazole MICs (
8
µg/ml) have been obtained by the NCCLS and other methods by using the
100% criterion (9; Espinel-Ingroff et al., unpublished
data). In the present study, the itraconazole MICs for these isolates
determined by the E-test were 4 to
8 µg/ml at both incubation
times. As reported by Denning et al. (9), two of the four
isolates were recovered from patients who failed appropriate
itraconazole therapy. These results suggest that both methods can
identify itraconazole-resistant isolates of Aspergillus.
Both methods also yielded high itraconazole MICs for
Fusarium spp., P. lilacinus, S. prolificans, and T. longibrachiatum (Table 2);
and these results are comparable to those determined by other
procedures for these species (1, 2, 7, 8, 27). E-test
results have not been published for P. lilacinus, R. arrhizus, or T. longibrachiatum, and the dematiaceous
species (except W. dermatitidis) evaluated in the study.
In conclusion, on the basis of data from this and another study
(30), the E-test has potential value for use for the
antifungal susceptibility testing of mold pathogens. Although the
E-test is easier to perform, it is important to consider that, as for any test for antimicrobial susceptibility testing, the medium formulation and, in this case, the depth of the agar can influence the
MIC. Therefore, the manufacturer's recommendations should be followed
when attempting to obtain MICs by the E-test. Also, E-test strips are
available only for investigational purposes. The wider amphotericin B
MICs obtained by the E-test for some Aspergillus spp. also
suggest that this method could be more useful than the NCCLS M38-P
method in detecting Aspergillus isolates potentially
resistant to this agent or that the latter method may not be a suitable
procedure for these species. Future studies with the new triazoles and
echinocandins, which are undergoing phase II and III clinical trials,
will assess the value of the E-test for measurement of their in vitro
activities against molds. However, in vivo-in vitro evaluations of drug
efficacy also are needed to provide a better assessment of the
utilities of both methods for use in the clinical laboratory as
predictors of antifungal resistance in patients with mold infections.
 |
ACKNOWLEDGMENTS |
Many thanks go to AB Biodisk and Remel Inc. for providing the
E-test strips and the solified agars for the E-test.
 |
FOOTNOTES |
*
Mailing address: Medical Mycology Research Laboratory,
Medical College of Virginia/VCU, P.O. Box 49, 1101 E. Marshall St., Sanger Hall, Room 7049, Richmond, VA 23298. Phone: (804) 828-9711. Fax:
(804) 828-3097. E-mail: avingroff{at}hsc.vcu.edu.
 |
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Journal of Clinical Microbiology, April 2001, p. 1360-1367, Vol. 39, No. 4
0095-1137/01/$04.00+0 DOI: 10.1128/JCM.39.4.1360-1367.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
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