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Journal of Clinical Microbiology, June 2001, p. 2311-2312, Vol. 39, No. 6
Departments of Medical
Microbiology1 and Respiratory
Disease,2 University Hospital Maastricht,
Maastricht, and Mycobacteria Reference Laboratory, National
Institute of Public Health and the Environment,
Bilthoven,3 The Netherlands
Received 19 October 2000/Returned for modification 21 January
2001/Accepted 13 March 2001
The Gen-Probe amplified Mycobacterium tuberculosis
direct test can give discrepant results directly in respiratory or
cultured samples from patients infected with Mycobacterium
celatum, leading to inappropriate therapy for, in our case, an
immunocompetent patient.
Mycobacterium
celatum was first described in 1993 (3), and since
then, sporadic reports have been published on the isolation of this
mycobacterium from immunocompromised patients (1, 5, 6, 8, 11,
12; R. A. Bonomo, J. M. Briggs, W. Gross, M. Hassan,
R. C. Graham, W. R. Butler, and R. A. Salata, Letter, Clin. Infect. Dis. 26:243-245, 1998; C. Piersimoni, E. Tortoli, and G. De Sio, Letter, Lancet 344:332, 1994), a
child with lymphadenitis (G. Haase, H. Skopnik, S. Bätge, and E. C. Böttger, Letter, Lancet 344:1020-1021,
1994), and a fatal pulmonary infection in an apparently healthy adult
(4). Biochemically, the organism is indistinguishable from
the Mycobacterium avium complex, and mycolic acid
high-pressure liquid chromatography analysis or genetic analysis is
required for proper identification (3). For
identification, cross-reactivity with nontuberculous mycobacteria has
been described with the AccuProbe culture confirmation test (Gen-Probe,
San Diego, Calif.) for the M. tuberculosis complex (2, 10). This note describes the initial misidentification and interpretation of a positive amplified M. tuberculosis
direct (AMTD) test (Gen-Probe) result for a respiratory sample derived from an immunocompetent patient with an M. celatum infection.
A 61-year-old man was referred on 5 March 1999 by a general
practitioner to the outpatient respiratory disease clinic because of
general malaise, a productive cough, and an unexplained 16-kg weight
loss in the past 3 years. The chest radiograph showed a pulmonary
infiltrate in the right upper lobe, with extensive cavities identified
by computed tomography. A bronchial lavage was performed and
showed on average more than one acid-fast rod per high-power field
(magnification, ×1,000. The AMTD test was positive with a value of
1,000,000 relative light units (RLU). Tuberculostatic drug therapy was
started with 300 mg of isoniazid, 600 mg of rifampin, and 2,000 mg of
pyrazinamide. Liquid culture (MB/BacT; Organon Teknika, Boxtel,
The Netherlands) was positive on 25 March 1999 and was subcultured on
Löwenstein Jensen agar. The subculture grew very small smooth
colonies with a pale yellow pigment and was sent to the
Mycobacterium section of the National Institute of Public
Health and the Environment (RIVM, Bilthoven, The Netherlands) for drug
susceptibility testing by the agar proportion method and species
identification. The AccuProbe culture confirmation tests for M. tuberculosis, M. avium complex, Mycobacterium
kansasii, and Mycobacterium gordonae were negative.
Because of the discrepancy between the AMTD test as performed by the
Medical Microbiology department at the University Hospital
Maastricht and the AccuProbe results of the RIVM, a culture was sent
again to the RIVM. This material again yielded a positive result
(509,094 RLU) in the AMTD test in Maastricht and again yielded a
negative result in the AccuProbe test at the RIVM. Therefore, it was
concluded that the AMTD result was probably a false positive. Drug
susceptibility data were only obtained on 26 June 1999 (Table
1) because of the slow growth and the
initial suspicion that we were dealing with a multiple-strain isolate.
Sequence analysis was complicated because of the possible
identification of two different 16S ribosomal DNAs (rDNAs), both of
which were from nontuberculous mycobacteria. Finally,
identification of M. celatum was only available on 2 January
2000. The two strains subcultured by the RIVM were sent to our
laboratory and yielded a positive result in the AMTD test (1,709,951 and 2,045,959 RLU, respectively). The original therapy was stopped on
30 June 2000 because of side effects. Therapy for nontuberculous
mycobacteria was not started because the patient did not feel ill
anymore and a new bronchial aspirate showed a reduction of the number
of acid-fast microorganisms. In addition, eradication of nontuberculous
mycobacteria from lungs with extensive damage is extremely difficult,
and after a period of treatment it is difficult to differentiate
between colonization and active infection. In the first few months, no
progression occurred; thereafter, the infiltrate in the right thorax
progressed and a new left-side infiltrate developed. After therapy with
ethambutol, clarithromycin, and rifabutin was initiated, the
left-side infiltrate disappeared and progression on the right side
stopped. Despite clinical improvement, sputum was still positive 1 year
after initiation of therapy.
0095-1137/01/$04.00+0 DOI: 10.1128/JCM.39.6.2311-2312.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Misidentification and Diagnostic Delay Caused by a False-Positive
Amplified Mycobacterium tuberculosis Direct Test in an
Immunocompetent Patient with a Mycobacterium
celatum Infection
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ABSTRACT
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References
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TEXT
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Abstract
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References
TABLE 1.
Drug susceptibility data, obtained by the agar proportion
method, for the M. celatum isolate
M. celatum is an uncommon Mycobacterium species, especially in immunocompetent patients. The misidentification by the AccuProbe has been investigated in two studies by testing cultured M. celatum type 1 strains. This is due to the similarity of the 16S rDNAs of the two species in the probe region (2). Our report shows that the AMTD test from the same company can also have problems when it is used directly on clinical specimens or cultured material containing M. celatum. Although it has not been published, this problem is acknowledged by the company and the package leaflet states that cross-reactions can occur if more than 30 CFU of M. celatum or Mycobacterium terrae-like organisms are present in clinical material. Similar problems in testing samples from patients with pulmonary M. kansasii and M. avium infections have been described (7). The latter study was performed with the first-generation test, and we used the second-generation test. In the second-generation test, the selection procedure, during which nonhybridized acridine ester probe is hydrolyzed, is extended from 10 to 15 min at 60°C. This would prevent cross-reaction of the probe with amplified 16S rRNA of M. kansasii; the problems with M. avium are not acknowledged by the company.
The misidentification led in our case to the initiation of inappropriate therapy. The difficulty of making an identification by 16S rDNA sequencing can be explained by the existence of two different copies of the gene in M. celatum strains (9). The results obtained at the RIVM also suggested the existence of two different copies, but they were misinterpreted as being derived from different isolates which could not be timely separated by subculture.
The early appearance of yellow-pigmented colonies and the susceptibility data are more in agreement with those of Piersimoni et al. (8) than with the original description (3). The complete resistance to rifampin and the full susceptibility to rifabutin are typical. However, the resistance to ciprofloxacin is unusual (1, 3, 6, 8, 11).
In summary, the AMTD test can misidentify M. celatum as M. tuberculosis. This can lead to delay of appropriate treatment and even misidentification of the isolate as a multiresistant M. tuberculosis isolate. However, it probably remains a minor problem of the AMTD test because of the low rate of M. celatum isolation (2). One should think of M. celatum if a positive AMTD test is followed by culture of an isolate with a nontuberculous appearance and with resistance data more indicative of nontuberculous mycobacteria. Another clue may be the problems encountered in 16S rDNA sequencing due to the existence of two different copies of the gene.
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FOOTNOTES |
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* Corresponding author. Mailing address: Medical Microbiology, University Hospital Maastricht, P. Debyelaan 25, 6229 HX Maastricht, The Netherlands. Phone: 31 43 3876644. Fax: 31 43 3876643. E-mail: jtj{at}lmib.azm.nl.
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