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Journal of Clinical Microbiology, August 2002, p. 2725-2728, Vol. 40, No. 8
0095-1137/02/$04.00+0 DOI: 10.1128/JCM.40.8.2725-2728.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.
Department of Adult Health Nursing, School of Nursing, University of Maryland, Baltimore, Maryland
Received 30 October 2001/ Returned for modification 24 February 2002/ Accepted 23 March 2002
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X174 that allows the rapid detection of penetration of gloves by this virus. The method is suitable for use with both latex and synthetic gloves. The presence of glove powder on either latex or synthetic gloves had no effect on the ability of the PCR assay to detect bacteriophage DNA. The assay is rapid, sensitive, and inexpensive; requires only small sample volumes; and can be automated. |
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X174. The assay uses PCR to detect the bacteriophage. PCR offers the advantages of being highly sensitive and specific for the agent being detected. With the recent and rapid increase in the availability of laboratory robotics for molecular biology, this PCR assay also has the potential to be automated and therefore made useful in the glove manufacturing setting. |
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X174 (ATCC 13706-B1) and its bacterial host, Escherichia coli C (ATCC 13706), were obtained from the American Type Culture Collection (Manassas, Va.). Broth cultures of E. coli were grown in NB medium (8 g of Nutrient Broth [EM Science, Gibbstown, N.J.]), 5 g of KCl, and 100 µl of Tween 80 [EM Science] in 1 liter of distilled H2O). Cultures of E. coli were maintained on solid NB medium, made as described above by the addition of 15 g of agar per liter and 1 ml of CaCl2 and the omission of Tween 80. For plaque analysis of bacteriophage
X174, the top agar composition was identical to that of the plate agar, except that the concentration of agar was 8 g/liter. Stock suspensions of bacteriophage
X174 were prepared by growth in liquid culture with E. coli C (8, 15). E. coli was incubated at 37°C to a density of approximately 108 CFU/ml (optical density at 600 nm, 0.3 to 0.4). The culture was then inoculated with stock bacteriophage
X174 (approximately 108 PFU) and incubated at 37°C with shaking. The optical density of the culture was monitored after the addition of bacteriophage, and incubation was continued until the density of the culture stopped dropping (approximately 4 to 5 h). After incubation, unlysed cells and cell debris were removed by centrifugation at 2,000 x g for 10 min, and the supernatant was filtered through a sterile 0.2-µm-pore-size filter. Suspensions of bacteriophage
X174 were stored at 4°C. Assay for bacteriophage penetration of punctured gloves. The types of gloves used in this study are listed in Table 1. A polypropylene beaker was filled with 200 ml of sterile nanopure water. For proof-of-principle testing, each finger of the gloves was punctured five times with an 18-gauge needle and then held over the water-filled beaker and filled with a solution containing bacteriophage (105 to 106 PFU/ml in sterile H2O), ensuring that all five fingers were filled. The glove was placed into the water-filled beaker and left at room temperature for 30 min, after which samples were drawn from inside and outside the glove.
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TABLE 1. Penetration of punctured synthetic and latex gloves by bacteriophage detected by plate enumeration and PCR
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Preparation of bacteriophage
X174 genomic DNA.
Bacteriophage
X174 DNA was prepared from a culture of E. coli infected with
X174 as described above by using a QIAprep Spin Miniprep kit (QIAGEN, Valencia, Calif.) and quantified by UV spectrometry at 260 and 280 nm.
Bacteriophage DNA detection by PCR amplification.
PCR was performed with diluted samples of the samples used for the method described above. PCR mixtures (total volume, 50 µl) consisted of 45 µl of PCR Supermix (Invitrogen Life Technologies, Carlsbad, Calif.), 1 µl of each primer solution (16 to 18 pmol/µl), 1 µl of diluted sample, and 2 µl of nuclease-free water. The primers (primers 5'-GCTTGCGTTTATGGTACG-3' and (5'-ATACGAAGGCGCATAACG-3') were designed on the basis of the bacteriophage
X174 genomic sequence (GenBank accession no. NC_001422) by using the World Wide Web-based GeneFisher software package (6) (the software package is no longer available at the time of this writing). The reaction mixtures were incubated in a RoboCycler Gradient 96 temperature cycler (Stratagene, La Jolla, Calif.): 5 min of preincubation at 94°C; 35 cycles of 94°C for 45 s, 54°C for 60 s, and 72°C for 60 s; and holding of the mixture for 10 min at 72°C postincubation. The PCR products were visualized in 1% agarose gels stained with ethidium bromide.
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X174 DNA, the limit of detection for purified
X174 DNA was first determined. After a stock of purified
X174 DNA was serially diluted 10-fold, the lowest detectable amount of bacteriophage
X174 DNA was approximately 50 fg (Fig. 1). Since the mass of one double-stranded copy of the
X174 genome is approximately 3.2 x 106 Da (5.5 x 10-18 g), the detectable amount of DNA corresponds to approximately 9,000 double-stranded copies of the bacteriophage
X174 genome.
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FIG. 1. Limit of detection of purified bacteriophage X174 DNA by PCR. Bacteriophage X174 DNA was purified from infected E. coli cells with a QIAprep spin column and diluted in sterile water. One microliter of each dilution was subjected to PCR amplification. The results shown are representative of those for two independent DNA preparations.
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X174 was examined. Tenfold dilutions of a lysate were added to the PCR mixtures (Fig. 2). The titers of aliquots of each dilution were also determined by growing diluted bacteriophage on the E. coli host in top agar. On the basis of the titers in the plates, the limit of detection for bacteriophage DNA by PCR was found to correlate with the presence of approximately 1 to 100 PFU per µl of sample (Fig. 2).
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FIG. 2. Detection of bacteriophage X174 DNA in a host cell lysate. A stock suspension of bacteriophage was prepared by growth in liquid culture with E. coli C, which was then serially diluted. One-microliter aliquots of each dilution were subjected to PCR amplification and to determination of phage titers by plate counting. The number of PFU in each PCR mixture is indicated above each lane. The results shown are representative of those from eight experiments.
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The number of bacteriophage in water inside and outside each punctured glove was enumerated by plate counting (100-µl samples), and 1-µl samples were drawn for PCR analysis. One-fifth (10 µl) of each PCR mixture was applied to an agarose gel to determine whether amplified bacteriophage DNA was present. Representative results of the PCR analyses are shown in Fig. 3. In all cases, the limit of detection of phage by PCR assays in the presence of gloves was higher than that in the absence of gloves. We seldom detected a PCR product from an assay with gloves when the titer in the sample was less than 100 PFU/µl (Fig. 3), while PCR products were routinely detected by PCR with lysates when the titer in the sample was less than 100 PFU/µl (Fig. 2). This may be due to the interference of glove residues with the PCRs.
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FIG. 3. PCR amplification of bacteriophage DNA. Water from inside and outside of punctured gloves was sampled and serially diluted 10-fold. The titers in each of the dilutions were then determined by plate counting, and the dilutions were used as templates in the PCRs. The numbers above each lane indicate the numbers of PFU per microliter in each dilution; the left-most lane contains undiluted sample. One microliter of each dilution was used as the template for PCR. Data are representative of those for six to eight gloves for each type of glove material. Complete data for the experiment are summarized in Table 1. As a percentage of the total number of phage inside each glove, more bacteriophage were found to have leaked from punctured synthetic gloves than from latex gloves. PVC, polyvinyl chloride.
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We detected far fewer PFUs outside the punctured latex gloves by plate counting. The average was approximately 75 PFU/µl (range, 20 to 196 PFU/µl), which is close to or somewhat below our limit of detection of phage from gloves by PCR. This result was surprising, given that the amount of bacteriophage inside the gloves was up to three times greater than the amount inside the synthetic gloves (Table 1). While 75 PFU/µl is above the limit of detection of our assay in the absence of gloves, we detected bacteriophage DNA outside only 11 of the 14 latex gloves tested. In an attempt to explain this discrepancy, we examined the recovery of phage from beakers containing water, bacteriophage, and gloves that had been sliced open. In three experiments, as much as 40% of the PFU added to the water was not recoverable, independent of whether the glove was powdered and independent of the glove material (data not shown), suggesting that both PFU and PCR-detectable material are adhering to the glove surfaces and are being sequestered from the assay.
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Our data demonstrated that the use of PCR to detect leakage of virus from gloves is at least as sensitive as conventional plate assays for the detection of bacteriophage. Conventional microbiological assays for the detection of bacteria or bacteriophage require a microbiology laboratory, preparation and/or storage of bacterial growth media, an incubation period of several hours, and the inspection of plates by a trained worker. While culture-based assays are sensitive and quantifiable, they are also time-consuming and have limited use in industrial settings that require the rapid testing of large numbers of samples. PCR offers the advantages of being faster (generally 1 to 3 h), potentially automatable through the use of laboratory robots, and more sensitive per unit of sample. While the dilution endpoints for detection of phage by PCR and the titers determined in the plates were approximately equivalent (Fig. 2), the sample size required for PCR is 1% that required for plate counting. In addition, only one-fifth of each PCR sample was analyzed by agarose gel electrophoresis, and the detection of PCR products by electrophoresis is inefficient relative to that by newer DNA detection technologies. For example, although it was not used in this study, real-time PCR technology with fluorescence detection of the product allows the detection of tens to hundreds of target DNA copies (1, 16), compared to the thousands detected in this work. The method is fast, relatively simple, and inexpensive on a per-assay basis. The use of PCR with fluorescence detection has already been demonstrated for influenza virus types A and B (18). Similar methods have been established for the detection of Chlamydia trachomatis and Mycobacterium tuberculosis and for the quantification of human immunodeficiency virus (13) in clinical settings. It is therefore logical that PCR detection of microorganisms could be useful in the quality assurance setting.
The ability to detect phage DNA was not obviously hindered by the presence of glove powder, as data for powdered and nonpowdered gloves among the gloves evaluated were comparable (Table 1), an important finding given the current prevalence of powdered gloves in use. There is at least one report that glove powder can inhibit PCR (4). In that study powder from a laboratory worker's gloves evidently entered PCR tubes during handling and subsequently inhibited DNA amplification. The lack of effect of glove powder in our study is probably the result of dilution, as the powder from each glove was dispersed in 300 ml of water in each experiment, and only 1 µl of sample was drawn for PCR analysis.
Glove material had a significant impact on the efficacy of the assay. A far lower proportion of bacteriophage inside punctured latex gloves leaked into the water outside the gloves. The reason for this has not been rigorously established; in fact, the latex gloves were more resilient than the synthetic gloves. Several workers have observed that some punctured latex gloves fail to leak water in a visual test, although microbial penetration is still detectable by culturing (3, 9; J. M. Broyles and D. Korniewicz, unpublished observations). This phenomenon has been termed "resealing." It is possible that, because of their greater resiliency, latex gloves contract when the puncturing object is withdrawn, leaving a hole smaller than the diameter of the puncturing object. In contrast, synthetic material may be tearing at the site of puncture or failing to retract around the hole when the puncturing object is removed. In any case, it is evident that higher titers of bacteriophage may be required to test latex gloves reliably when samples volumes are as small as those used in this study, or the method will have to be modified to place latex gloves under a stress that will result in the stretching and widening of the holes.
A factor possibly complicating the interpretation of our results is the likely presence of free phage DNA in the host cell lysates used in this study. While we sampled 100-fold less material for PCR than for plate counting, we found that both methods gave approximately equal limits of detection according to their dilution endpoints. Because the likelihood that the 1 µl of sample drawn for PCR contained all the PFU detected in 100 µl of the same dilution of a phage preparation is exceedingly low, we conclude that phage lysates contained either free DNA or noninfective phage particles, or both. Gloves could be tested by using calibrated phage preparations purified by density gradient centrifugation and particles enumerated by electron microscopy; this would avoid uncertainty in identifying the PCR target. To increase the likelihood of detecting penetrating phage, the size of the PCR mixture can also be scaled up to allow use of a larger sample size, higher titers of bacteriophage may be added to the assay, or, as described above, more sensitive methods of performing the PCR and detecting amplified DNA can be used. Future studies should address standardization of viral preparations, their interactions with glove material, the use of real-time fluorogenic PCR methods, and the use of engineering modifications either to adapt the current glove testing apparatus to PCR testing or to develop entirely new automated glove testing systems.
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