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Journal of Clinical Microbiology, December 2004, p. 5571-5577, Vol. 42, No. 12
0095-1137/04/$08.00+0 DOI: 10.1128/JCM.42.12.5571-5577.2004
Copyright © 2004, American Society for Microbiology. All Rights Reserved.
Centro Nacional de Microbiología,1 Agencia Española del Medicamento, Ministry of Health, Majadahonda,2 Department of Microbiology, Hospital Ramón y Cajal, Madrid, Spain3
Received 21 June 2004/ Returned for modification 26 July 2004/ Accepted 29 July 2004
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In Europe, antimicrobial resistance of invasive pathogens has been monitored by the European Antimicrobial Resistance Surveillance System (EARSS). Its U.S. counterpart, the International Network for the Study and Prevention of Emerging Antimicrobial Resistance (INSPEAR), was launched by the CDC with a similar goal (23). Funded by the EC, EARSS is an international network of national surveillance systems that attempts to collect reliable and comparable data. The purpose of EARSS is to document variations in antimicrobial resistance over time and space so as to provide the basis for and assess the effectiveness of prevention programs and policy decisions. More than 20 countries and 600 European laboratories provide antibiotic susceptibility data to national databases and to a central database.
Streptococcus pneumoniae is the most frequent cause of bacterial respiratory tract infections, including otitis, sinusitis, pneumonia, and infectious exacerbation of chronic bronchitis, as well as potentially life-threatening systemic infections such as meningitis and bacteremia. Until recently, penicillin was the treatment of choice for S. pneumoniae infections. However, pneumococci possessing structural changes in the penicillin binding proteins have been discovered in most countries in which studies have been performed. This change results in reduced susceptibility to penicillin as well as to other ß-lactam antibiotics (1, 27, 31). The penicillin MICs for many of these strains are 0.1 to 1.0 µg/ml, allowing extrameningeal infections to be treated with high doses of this antibiotic (21). However, the existence of strains for which the MIC is
2 µg/ml and the frequent cross-resistance with other antibiotics create a serious therapeutic problem (1, 20, 31).
The rates of antimicrobial resistance and antimicrobial consumption in Spain are among the highest (1, 4, 19). The goal of this study was to describe and analyze antibiotic resistance trends in invasive isolates of S. pneumoniae collected by Spanish hospitals participating in the EARSS network between 2001 and 2003. Since we found that penicillin resistance was decreasing, we also sought to determine whether general antibiotic consumption was also decreasing.
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Isolates studied.
We included all clinical isolates of S. pneumoniae obtained from blood and cerebrospinal fluid (CSF) in Spanish laboratories participating in EARSS between 2001 and 2003. For this study, invasive infection is considered to be infection with an S. pneumoniae strain isolated from blood or CSF. Only the first invasive isolate per patient was reported.
Data collection.
A questionnaire concerning hospital characteristics (coverage, hospital type, number of beds, number of patients admitted per year, hospital departments), methods of antimicrobial susceptibility study, and interpretation criteria was submitted to each participating center. One isolate record was completed for each patient. This form included the patient's personal data (code, age, sex), hospital and departmental data, and antibiotic susceptibility data.
Participating hospitals sent prospective standardized results to the Centro Nacional de Microbiología of the Instituto de Salud Carlos III (Ministry of Health), where results were analyzed and validated by using the laboratory-based WHONET 5 program (WHO Collaborating Centre for the Surveillance of Antibiotic Resistance). All records were carefully analyzed by a medical microbiologist. Duplicate isolates from a single patient were identified and deleted. Discrepancies and atypical results were resolved by telephone, and the corresponding database records were updated if necessary. An annual report of all the data stored in the central database was sent to each participating laboratory in order to avoid possible disagreements.
Susceptibility studies.
The protocol for S. pneumoniae susceptibility testing included study of susceptibility to penicillin by means of the oxacillin disk and/or the MIC of penicillin G (recommended in cases where resistance is found by the oxacillin disk test), to third-generation cephalosporins, to erythromycin, and to ciprofloxacin as a marker of fluoroquinolone susceptibility. Moreover, data on antimicrobial susceptibility to other antibiotics were also considered when a participating laboratory routinely tested them. For this reason, the number of strains studied for each antibiotic and method was not always the same as the total number of strains.
Antimicrobial susceptibility was tested by using the disk-plate diffusion method combined with the use of E-test strips (AB-Biodisk, Solna, Sweden) in 25 of the 40 participating laboratories. The remaining 15 laboratories used different commercial microdilution systems: 7 used Wider (Fco. Soria Melguizo, Madrid, Spain), 4 used MicroScan (Dade-Behring, Deerfield, Ill.), 3 used Sensititre (Radiometer/Copenhagen Company, Copenhagen, Denmark) and 1 used Vitek (bioMérieux, Marcy l'Etoile, France).
Most laboratories (39 of 40) applied the norms and criteria of the NCCLS for interpretation of antibiotic susceptibility. One laboratory used the Neosensitab commercial system (Rosco, Taastrup, Sweden; available at http://www.rosco.dk) for the disk diffusion method and NCCLS criteria for the E-test method. No significant differences in susceptibility results were found between the laboratory using Neosensitab system criteria and the laboratories using NCCLS criteria. The quality control results of this laboratory also agreed with those obtained by reference laboratories (see below).
For cefotaxime, the NCCLS breakpoints for meningitis (
0.5 to
2 µg/ml) were considered in all isolates. Because clinical infection data generated by blood isolates were not always available, some of the blood isolates were probably implicated in meningitis cases. In addition, cefotaxime susceptibility in strains from blood was also calculated with the new NCCLS cefotaxime breakpoints (
1 to
4 µg/ml) (18).
Quality control.
To assess the comparability of susceptibility test results, a quality assurance exercise was performed annually for the 40 Spanish laboratories participating in EARSS. The United Kingdom National External Quality Assessment Scheme (NEQAS) designed this quality control system. Altogether, testing included 24 highly characterized control invasive strains, including 6 S. pneumoniae strains with different resistance phenotypes. It was recommended that laboratories include these external quality control strains in the regular internal quality control procedures performed by each laboratory. Data on susceptibility to penicillin G, cefotaxime, ciprofloxacin, and erythromycin were required. In addition, each laboratory completed a questionnaire concerning the methods used for determining susceptibility and applying interpretation criteria.
Antibiotic consumption.
Due to the high rates of antibiotic resistance in S. pneumoniae in Spain (1, 20, 22), we studied the evolution of antibiotic consumption in the community between 1998 and 2002. The Spanish Ministry of Health and Consumer Affairs maintains a drug database with all retail pharmacy sales of medicines acquired with National Health System prescriptions, covering nearly 100% of the Spanish population (15, 24). This database was used to gather information on sales during the period studied. The information was tabulated, and the number of units sold was converted into defined daily doses (DDD) of active drug ingredients by use of the WHO methodology (33). The number of DDD per 1,000 inhabitants per day for each of the active drug ingredients was then calculated; however, these data were not available in correlation to patient age.
Statistical analyses.
Differences in the prevalence of antibiotic resistance between different groups were assessed by the Fisher exact test. Association was determined by calculation of odds ratios (OR) with 95% confidence intervals (95% CI). The null hypothesis was rejected for P values of <0.05. Statistical analyses were performed by using EPI-Info (version 6.04).
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Quality control results.
Among participating laboratories, the overall concordance of antimicrobial susceptibility for the six S. pneumoniae control isolates tested in the three years was 94 to 97% for penicillin, 97 to 100% for erythromycin, and 82 to 100% for cefotaxime. Several Spanish laboratories did not report the categorization of ciprofloxacin susceptibility due to the lack of breakpoints in the majority of microbiology societies. However the MICs reported by more than 90% of Spanish hospitals were within the range of the reference MIC ± 1 dilution.
In the very few cases of disagreement between the expected quality control results and the performance of individual laboratories, each individual case was analyzed and discussed with the participants. Measures to improve the laboratory procedures were proposed when necessary, including dispatch of the isolates to the Spanish S. pneumoniae reference laboratory.
Patient data and incidence of invasive infections.
Over the study period, the 40 participating hospitals reported data for 1,968 invasive isolates of S. pneumoniae, corresponding to the same number of patients: 656 in 2001, 657 in 2002, and 655 in 2003. Of total isolates, 1,247 (63.4%) were isolated from males and 721 (36.6%) were isolated from females. There were 1,847 strains (93.9%) isolated from blood and 121 (6.1%) isolated from CSF. Of the total number of isolates, 404 (20%) were from children at or below the age of 14 years, and 356 (17.4%) were from children at or below the age of 4 years. The numbers of invasive cases in children were 139 (2001), 128 (2002), and 137 (2003). The incidence of invasive S. pneumoniae infections in the general population was estimated to be 5.8 cases/100,000 patients. Strains were isolated more frequently in the winter months (718 strains [36.5%]) than in the summer months (203 strains [10.3%]; P < 0.01). The number of invasive infections by month is shown in Fig. 1. A trend toward less penicillin susceptibility and lower case numbers during the summer months was noted, in contrast with less penicillin resistance and higher case numbers during the winter months (Fig. 1).
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FIG. 1. Number of invasive infections by S. pneumoniae and prevalence of decreased susceptibility to penicillin by month according to data from EARSS-Spain, 2001 to 2003.
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TABLE 1. Antimicrobial susceptibilities of invasive S. pneumoniae isolates (EARSS-Spain, 2001 to 2003)
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2 µg/ml was 1.4%. The activity loss of cefotaxime was parallel to that noted for penicillin. None of the 1,204 penicillin-susceptible isolates had reduced susceptibility to cefotaxime, while 181 out of 665 (27.2%) isolates not susceptible to penicillin also had reduced cefotaxime susceptibility (P < 0.001) (Table 2). All the cefotaxime-resistant isolates, 1.5% of the total, were also resistant to penicillin. |
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TABLE 2. Susceptibility to erythromycin and cefotaxime according to penicillin susceptibility
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Resistance to penicillin, erythromycin, cefotaxime, and clindamycin was higher in females than in males, although the difference was not statistically significant. However, combined trend analysis of these four antibiotics showed that antimicrobial resistance was significantly more prevalent in females than in males (P < 0.01; OR, 1.17; 95% CI, 1.06 to 1.29).
For children
4 years old, 52.3% of isolates were intermediate or resistant to penicillin, while 31.8% of isolates from patients
5 years old were intermediate or resistant (P < 0.001; OR, 2.35; 95% CI, 1.85 to 3). The corresponding percentages for cefotaxime were 14.1 versus 8.6% (P < 0.001; OR, 1.75; 95% CI, 1.19 to 2.57), and those for erythromycin were 40.1 versus 24.4% (P < 0.001; OR, 1.75; 95% CI, 1.19 to 2.57) (Fig. 2).
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FIG. 2. Antimicrobial resistance of invasive S. pneumoniae isolates in relation to patient age (EARSS-Spain, 2001 to 2003).
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Antimicrobial resistance trends.
Changes in antimicrobial resistance over time are detailed in Fig. 3. Overall rates of reduced penicillin susceptibility (intermediate plus resistant isolates) decreased from 39.5% in 2001 to 33% in 2003 (P = 0.05; OR, 1.26; 95% CI, 1 to 1.59). This change was principally due to changes in isolates from children
14 years old. In this age group, the frequency of reduced penicillin susceptibility fell from 60.4% in 2001 to 41.2% in 2003 (P = 0.002; OR, 2.16; 95% CI, 1.29 to 3.63) (Fig. 4). The decrease in the frequency of reduced penicillin susceptibility among adults (>14 years old) was not statistically significant (P = 0.36) (Fig. 4). Rates of erythromycin resistance and reduced susceptibility to cefotaxime showed slight decreases, from 28.7% in 2001 to 25.7% in 2003 (P = 0.22) and from 10.7% in 2001 to 8.4% in 2003 (P = 0.19), respectively (Fig. 3). The frequency of coresistance to penicillin and erythromycin was 23.4% in 2001 compared to 18.1% in 2003 (P = 0.02; OR, 1.38; 95% CI, 1.04 to 1.82) (Fig. 3). In children
14 years old, the frequency of coresistance decreased 11.1%, from 29.1% in 2001 to 18% in 2003 (P = 0.03; OR, 1.87; 95% CI, 1 to 3.51). The rate of resistance to ciprofloxacin (MIC, >2 µg/ml) increased from 0.4% in 2001 to 3.9% in 2003 (Fig. 5).
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FIG. 3. Annual evolution of antimicrobial resistance in invasive S. pneumoniae strains isolated by Spanish laboratories participating in EARSS (2001 to 2003). I, intermediate; R, resistant.
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FIG. 4. Annual evolution of non-penicillin-susceptible invasive S. pneumoniae in relation to patient age.
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FIG. 5. Annual evolution of levofloxacin consumption plus moxifloxacin consumption and ciprofloxacin resistance in invasive S. pneumoniae.
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TABLE 3. Community antimicrobial consumption in Spain, 1998 to 2002
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The primary laboratory receives the clinical specimens and performs routine antimicrobial susceptibility testing for clinical treatment. The resulting information has the disadvantages of possible variability of the antimicrobial agents assayed, the study methods performed, and the interpretative criteria employed, although in our experience, the vast majority of laboratories used NCCLS-recommended methodologies. EARSS researchers have performed validation of antimicrobial susceptibility results from 22 European countries, including Spain (3). Cross-validation of routine data gathering and centralized surveys has been performed (17). For example, for invasive Escherichia coli, the same trends in resistance to ampicillin, ciprofloxacin, gentamicin, and trimethoprim were found in routine sample results and in a centrally tested sample (17).
The prevalence of non-penicillin-susceptible invasive isolates of S. pneumoniae found in this study (34.5%) is similar to that reported from other studies in Spain (1, 22). However, this result is lower than the global prevalence if all types of clinical isolates, especially those of respiratory origin, are accounted for (1, 20, 22). In a national multicenter study performed in Spain between 1998 and 1999, 34.1% of 314 isolates from blood had reduced susceptibility to penicillin, in contrast with 53.2% of 1,169 isolates from respiratory samples (22). High rates of resistance have also been reported for Asian countries (13, 26, 27). In Taiwan, the prevalences of non-penicillin-susceptible invasive isolates from children
18 years old and from adults reached 76 and 45%, respectively (26). In the United States, the prevalence of decreased susceptibility of S. pneumoniae to penicillin was 38% among 10,103 respiratory tract isolates sampled between 2000 and 2001 (8), and 32% of 1,345 blood isolates isolated in 2002 had decreased penicillin susceptibility (14). Notably, variation in regional antimicrobial penicillin resistance has also been described (30).
In this study a constant and significant decrease in the prevalence of penicillin-resistant pneumococcal strains occurred between 2001 and 2003 (Fig. 3). Previously, two other Spanish studies (9, 10) described a similar reduction among isolates from all types of clinical sources and reported a high initial prevalence of penicillin resistance, >52% in both cases. This trend was observed before the introduction of the heptavalent pneumococcal conjugate vaccine in Spain (June 2001).
The serotypes included in the heptavalent pneumococcal conjugate vaccine (serotypes 4, 6B, 9V, 14, 18C, 19F, and 23F) covered 60% of the 11,165 Spanish pneumococci isolated from all sources between January 1997 and June 2001 and 75.6% of the strains from children (9). In addition, penicillin resistance has been associated mainly with certain serotypes, principally serotypes 6, 9, 14, 19, and 23 (9), all of which are included in the vaccine. It is believed that about 40% of Spanish children
2 years old have been vaccinated privately, since the vaccine is not yet included in the official vaccination calendar. In the present study the reduction in penicillin resistance was particularly significant among children (Fig. 4), suggesting that vaccination may play a key role in preventing antimicrobial resistance in S. pneumoniae (32), as has been the case for Haemophilus influenzae type b (28).
We also found a reduction in antibiotic consumption in recent years, except for amoxicillin-clavulanic acid, the new fluoroquinolones (levofloxacin and moxifloxacin), and the new macrolides (clarithromycin and azithromycin). Although multiple factors influence the emergence and spread of antimicrobial resistance, antimicrobial consumption is one of the most important. It has been demonstrated that ß-lactam antibiotic consumption levels correlate strongly with rates of pneumococcal penicillin resistance in various European countries as measured by EARSS data (2). It is likely that the reduction in levels of reduced penicillin susceptibility, which was reported for Spanish pneumococcal isolates before the conjugate vaccine was available, could be associated with variations in antibiotic consumption.
In this study, about 70% of erythromycin-resistant strains were also resistant to clindamycin. This probably implies a ribosomal methylation mechanism of resistance mediated by erm genes, the mechanism reported most frequently for European S. pneumoniae isolates (1, 25). The remaining strains showed a pattern of resistance (M phenotype) compatible with the presence of an active expulsion pump encoded by the mef genes. This mechanism predominates in the United States and generates resistance to macrolides of 14 and 15 atoms (7) but not to lincosamides and macrolides of 16 atoms. The same resistance phenotype could also be generated by the action of an inducible ribosomal methylation mechanism (1, 25). In the present study, no relevant changes in the prevalences of profiles of resistance to macrolides were noted.
Ciprofloxacin susceptibility is a good marker of susceptibility to other fluoroquinolones, such as levofloxacin and moxifloxacin, which currently represent good therapeutic alternatives for S. pneumoniae. In fact, the combined consumption of levofloxacin and moxifloxacin increased in Spain from 0.14 DDD/1,000 inhabitants/day in 1999 to 0.67 DDD/1,000 inhabitants/day in 2002. Despite this, fluoroquinolone-resistant pneumococci were rare in this study, and ciprofloxacin demonstrated good in vitro activity against the majority of pneumococci tested, in agreement with the results of previous studies (1, 7). The percentage of strains for which the ciprofloxacin MIC was >2 µg/ml (2.1%) agrees with the results of other recent studies, in which a reduction in susceptibility to fluoroquinolones was noted for approximately 2% of strains (6, 16). This is less than the 5.3 and 7.0% of strains isolated from respiratory tract infections reported in two recent Spanish studies (11, 22). However, an important increase in the prevalence of ciprofloxacin resistance has been observed in our study. Some authors have found a statistically significant association between a reduction in penicillin susceptibility and a reduction in ciprofloxacin susceptibility (MIC, >2 µg/ml) (6, 16, 22) or between a reduction in ciprofloxacin susceptibility and resistance to macrolides (11, 22). Neither of these associations was noted in our study.
In summary, although penicillin resistance levels among invasive Spanish S. pneumoniae strains were among the highest in Europe, they have declined significantly in recent years, especially in children. This trend occurred in the contexts of increased heptavalent pneumococcal conjugate vaccination of children and reduced global antibiotic use in the community. Although quinolone resistance remained low, a rapid increase was noted. Therefore, properly designed and conducted surveillance systems will continue to be essential for detecting changes in antimicrobial resistance.
Spanish members of EARSS are José Lite and Javier Garau (Hospital [H.] Mutua de Terrassa, Terrassa), Dionisia Fontanals (Corporació Parc Taulí, Barcelona), Pilar Berdonces and M. José L. De Goicoetxea (H. Galdakao, Galdakao), Oscar del Valle-Ortiz (H. Vall d'Hebron, Barcelona), Isabel Wilhemi (H. Severo Ochoa, Leganés), Francisco J. Vasallo-Vidal (H. do Meixoeiro, Vigo), Elena Loza (H. Ramón y Cajal, Madrid), Pilar Peña and Avelino Gutiérrez-Altés (H. La Paz, Madrid), Gregoria Megías-Lobón and Eva Ojeda (H. General Yagüe, Burgos), Carmina Martí (Hospital General [H.G.] de Granollers, Granollers), Maria José Gastañares (H. San Millán, Logroño), Mercedes Menéndez-Rivas (H. Infantil del Niño Jesús, Madrid), Pilar Bermudez and Marta García-Campello (Complejo Hospitalario de Pontevedra, Pontevedra), Rosario Moreno and Alfonso García-del Busto (H.G. de Castellón, Castellón), María del Mar Pérez-Moreno and Ignacio Buj (H. Verge de la Cinta, Tortosa), Gloria Royo and Matilde Elia (Hospital General Universitario [H.G.U.] de Elche, Elche), Francisco Merino and Ángel Campos (H. de Soria, Soria), María Teresa Pérez-Pomata (H.G.U. de Guadalajara, Guadalajara), Almudena Tinajas (H.G. Cristal Piñor, Orense), Consuelo Miranda and María Dolores Pérez (Hospital Universitario [H.U.] Virgen de la Nieves, Granada), Ana Fleites (H.G. de Asturias, Oviedo), Carmen Amores (H. San Agustín, Linares), Pilar Teno (H. San Pedro de Alcántara, Cáceres), A. Gimeno and Ramona Jiménez (H. Infanta Cristina, Badajoz) Carmen Raya (H. del Bierzo, Ponferrada), Begoña Fernandez (H. Sta. María Nai, Orense), María Fe Brezmes (H. Virgen de la Concha, Zamora), María Teresa Cabezas (H. de Poniente, El Ejido), Rafael Carranza (H.G. La Mancha-Centro, Ciudad Real), Alberto Gil-Setas, José Javier García-Irure, and Luis Torroba (Grupo Hospitales Ambulatorio General Solchaga, Pamplona), Alberto Yagüe (H. Vega Baja, Orihuela), Natalia Montiel (H. Costa del Sol, Marbella), Alfonso Pinedo (H. Virgen de la Victoria, Málaga), José Antonio Lepe (H. Río Tinto, Huelva), Juan Carlos Alados (H. de Jerez, Cádiz), Manuel Rodríguez (H. Puerto Real, Cádiz), Estrella Martín and Samuel Bernal (H. Valme, Seville), Inocente Cuesta (H. Ciudad de Jaén, Jaén), M
Dolores Crespo and Juan José Palomar (Complejo Hospitalario de Albacete, Albacete), M
José Revillo (H. Miguel Servet, Zaragoza), and Virtudes Gallardo (Consejería de Salud de la Junta de Andalucía, Seville).
Spanish members of EARSS are listed in Acknowledgments. ![]()
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