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Journal of Clinical Microbiology, February 2004, p. 722-726, Vol. 42, No. 2
0095-1137/04/$08.00+0 DOI: 10.1128/JCM.42.2.722-726.2004
Copyright © 2004, American Society for Microbiology. All Rights Reserved.
Laboratory of Antimicrobial Resistant Pathogens, Department of Bacteriology, National Institute of Health ,1 Department of Biology, Faculty of Natural Science, Chung-Ang University, Seoul, Korea2
Received 7 February 2003/ Returned for modification 17 March 2003/ Accepted 3 November 2003
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Proteinase assay. To select the optimum substrate, we compared 1% azoalbumin, 1% hemoglobin, and 1% azocasein (Sigma) as substrates. Ten microliters of crude enzyme solution was incubated with 100 µl of each substrate and 290 µl of buffer solution at 37°C for 16 h. Trichloroacetic acid (20%; Sigma) was added to stop the reaction, and the precipitated substrate was removed by centrifugation at 15,000 x g for 30 min. The amount of digested substrate was determined by measuring the supernatant at an optical density (OD) at 440 nm (azoalbumin and azocasein) and OD at 280 nm (hemoglobin). One unit of enzyme activity was defined as the amount of enzyme needed to increase the A440 and A280 by 0.1 OD unit.
Enzyme purification. Cells were removed by centrifugation at 5,000 x g for 15 min, and the supernatant was filtered through a 0.2-µm-pore-size membrane filter (Nalgene Co., Rochester, N.Y.), precipitated with ammonium sulfate (40 to 60%), and centrifuged at 15,000 x g for 30 min. It was then dialyzed against distilled water, and the dialysate was applied to a 1.6- by 15-cm column of DEAE-Sepharose fast-flow beads equilibrated with 20 mM Tris-HCl (pH 8.0) buffer. Bound protein was eluted with a stepwise gradient of 0.1, 0.15, 0.25, 0.5, 0.75, and 1 M NaCl. The eluted fractions were collected, and protein concentration and enzyme activity were determined. Fractions containing proteolytic activity were pooled, dialyzed against distilled water at 4°C, and lyophilized. The partially purified enzyme was further purified by gelatin affinity chromatography (0.8- by 5-cm column) and equilibrated with 20 mM Tris-Cl (pH 8.0), and buffer and bound protein were eluted with a linear gradient of up to 1 M NaCl.
SDS-PAGE.
Sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) was performed according to the method of Laemmli (13) using 12% (wt/vol) polyacrylamide gels (Novex Co.). Proteins were stained with Coomassie brilliant blue R-250 and destained to visualize the bands. Protein standards were phosphorylase b (97 kDa), BSA (66 kDa), ovalbumin (45 kDa), carbonic anhydrase (30 kDa), soybean trypsin inhibitor (20.1 kDa), and
-lactalbumin (14.4 kDa) (Bio-Rad Co., Richmond, Calif.).
Determination of isoelectric point. Isoelectric focusing was carried out with pH 3 to 10 polyacrylamide gels along with the standard markers human carbonic anhydrase B (pI 6.55), bovine carbonic anhydrase B (pI 5.85), ß-lactaglobulin A (pI 5.2), soybean trypsin inhibitor (pI 4.55), glucose oxidase mannitol (pI 4.15), and methyl red (pI 3.75) (Pharmacia Biotech, Uppsala, Sweden).
Determination of optimal pH. The optimal pH of the purified enzyme was determined in various buffers (pH range, 4.0 to 9.0). Ten microliters of enzyme solution in 290 µl of 0.1 M sodium acetate buffers (pH 4.0 to 5.5), 0.1 M phosphate buffers (pH 6.0 to 7.5), 0.1 M Tris-HCl buffers (pH 7 to 8.5), and 0.1 M glycine-OH buffers (pH 9.0) was incubated for 16 h at 37°C with 100 µl of 1% azoalbumin. Enzyme activity was measured at 440 nm with a spectrophotometer.
Determination of optimal temperature. To determine the optimal temperature, 10 µl of enzyme solution in 290 µl of 0.1 M sodium phosphate buffer (pH 7.5) was incubated for 16 h at temperatures from 4 to 70°C with 100 µl of azoalbumin.
Effect of proteinase inhibitors.
The purified enzyme was preincubated at 37°C for 2 h in 0.1 M phosphate buffer (pH 7.5) with inhibitors, and 100 µl of substrate was added. The reaction mixtures were incubated at 37°C for 16 h, and enzyme activity was measured. The inhibitors used in this study were leupeptin (100 µM), iodoacetic acid (1 mM), diisopropylfluorophosphate (DFP) (100 µM), phenylmethylsulfonyl fluoride (PMSF) (1 mM), transepoxysuccinyl-L-leucylamide-(4-guanidino)butane (E-64) (10 µM), N-
-p-tosyl-L-lysine-chloromethyl ketone (TLCK) (100 µM), N-tosyl-L-phenylalanine-chloromethyl ketone (TPCK) (100 µM), pepstatin A (1 µM), and EDTA (5 mM). All inhibitors were purchased from Sigma.
Degradation of natural substrates. Hemoglobin (bovine), ß-casein (from bovine milk), and gamma globulin (from bovine plasma) were purchased from Sigma. They were dissolved in 0.1 M sodium phosphate buffer (pH 7.5) at a concentration of 5 mg/ml and incubated with purified enzyme for various times. SDS-PAGE was performed to measure degradation as described previously.
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Proteinase activity assay. One percent azoalbumin (100% degradation) was the best substrate compared to 1% azocasein (30% degradation) and 1% hemoglobin (42% degradation). One percent azoalbumin was used as substrate in each purification step.
Purification of enzyme. Two peaks of proteolytic activity (Fig. 1A) were generated by the first ion-exchange column. The three fractions of the 0.25 M NaCl gradient with highest proteolytic activity were pooled, dialyzed, concentrated, and applied to the gelatin affinity column (Fig. 1B). The two fractions from this with the highest proteolytic activity were pooled, dialyzed, and concentrated for further study.
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FIG. 1. Proteinase purification and SDS-PAGE. (A) First DEAE-Sepharose column chromatograph. The column was equilibrated with 20 mM Tris-HCl (pH 8.0) buffer, and bound proteins were eluted with a step gradient of 0.1, 0.15, 0.25, 0.5, 0.75, and 1.0 M NaCl. (B) Second gelatin affinity chromatograph of the active fractions from the first DEAE column eluted with a linear gradient of NaCl. The protein concentration was measured with a spectrophotometer at 280 nm (), and proteolytic activity, with azoalbumin as the substrate, was measured at 440 nm absorbance ( ). (C) SDS-12% PAGE of C. neoformans extracellular proteinase. Lane 1, standard SDS-PAGE markers; lane 2, crude extracts (40 to 60% ammonium sulfate precipitate); lane 3, fractions with proteolytic activity from the first DEAE-Sepharose chromatograph; lane 4, fractions with proteolytic activity from the second gelatin affinity chromatograph. SDS-PAGE markers: A, phosphorylase B (97 kDa); B, BSA (66 kDa); C, ovalbumin (45 kDa); D, carbonic anhydrase (30 kDa); E, soybean trypsin inhibitor (20.1 kDa); F, -lactalbumin (14.4 kDa). The molecular mass of the purified enzyme was determined from its mobility relative to the protein standards.
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Optimal pH, temperature, and pI of the purified proteinase. The purified enzyme had a pI of 4.77 (Fig. 2A) and a maximum activity in 0.1 M phosphate buffer (pH 7.5). The activity increased linearly from pH 6.0 to 7.5, and 80% of the total enzyme activity was manifested between pH 7.0 and 8.0 (Fig. 2B). It had a narrow temperature optimum with a maximum at 37°C, and it was almost completely inactive at 50 to 70°C (Fig. 2C).
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FIG. 2. Characterization of the enzyme purified from C. neoformans culture filtrates. (A) Isoelectric focusing and pI determination. The isoelectric focusing gel range was pI 3 to 10. Lane 1, standard pI markers; lane 2, purified enzyme. The pI value of the purified enzyme was determined by the mobility of the purified enzyme relative to the standard pI markers. pI markers: A, human carbonic anhydrase B (pI 6.55); B, bovine carbonic anhydrase B (pI 5.85); C, ß-lactaglobuin A (pI 5.2); D, soybean trypsin inhibitor (pI 4.55); E, glucose oxidase mannitol (pI 4.15); F, methyl red (dye) (pI 3.75). (B) pH dependence of the purified enzyme. The purified enzyme was incubated with azoalbumin in various pH buffer solutions. The maximal activity, seen in 0.1 M phosphate buffer (pH 7.5), is taken as 100%. Enzyme activity increased linearly from pH 6.0 to 7.5, and 80% of the total activity was exhibited between pH 7.0 and 8.0. (C) Temperature dependence of the purified proteinase. Ten microliters of purified enzyme was incubated in 290 µl of 0.1 M sodium phosphate buffer (pH 7.5) and 100 µl of azoalbumin substrate solution at 4, 25, 30, 35, 37, 50, and 70°C for 16 h. The proteolytic activity remaining was measured at OD440 by spectrophotometer.
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TABLE 1. Effects of various inhibitors on proteolytic activity of purified enzymea
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FIG. 3. Time-dependent degradation of natural substrates. Substrates dissolved in 0.1 M sodium phosphate buffer (pH 7.5) at a concentration of 5 mg/ml were incubated with purified enzyme. Results are shown for the degradation of gamma globulin (A), ß-casein (B), and hemoglobin (C). Lanes: M, standard marker; 1, gamma globulin (A), ß-casein (B), and hemoglobin (C) controls; 2, 6 h of reaction; 3, 12 h of reaction; 4, 24 h of reaction; 5, 48 h of reaction.
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