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Journal of Clinical Microbiology, February 2004, p. 746-752, Vol. 42, No. 2
0095-1137/04/$08.00+0 DOI: 10.1128/JCM.42.2.746-752.2004
Copyright © 2004, American Society for Microbiology. All Rights Reserved.
Department of Microbiology and Immunology, The University of Texas Health Science Center, San Antonio, Texas,1 Department of Epidemiology, The University of Washington, Seattle, Washington2
Received 10 July 2003/ Returned for modification 18 September 2003/ Accepted 2 November 2003
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Furthermore, distinct biological features of M. genitalium, which include its small size and lack of cell wall, prevent the use of traditional and relatively simple histopathological staining and light microscopy methods to assess relationships between M. genitalium and tissue colonization and disease. An experimental animal model using chimpanzees as a host for M. genitalium infection has provided direct evidence for its pathogenic capabilities, based upon colonization and shedding of mycoplasmas over many months, genitourinary tract-associated inflammatory pathologies, and >4-fold seroconversion (26, 32). However, other subhuman primates are much less susceptible, if at all, and alternate animal species are even less relevant in providing a model that parallels human M. genitalium disease. Since M. genitalium is emerging as an important infectious agent (8, 13, 30), it is becoming increasingly important to correlate the in situ presence of M. genitalium with human disease. Unfortunately, direct isolation and cultivation of M. genitalium from clinical genitourinary samples in cell-free broth or agar medium are a very rare event (4, 36). In the absence of consistent "gold standard" culture methods to establish the existence of M. genitalium in clinical samples, recent associations of M. genitalium with clinical signs and symptoms have been predominantly based upon PCR and evidence for seroconversion (11, 12, 27), both of which have substantial limitations in evaluating the role of M. genitalium in human diseases. For example, in the case of serological assessment, sequential serum samples are a prerequisite for establishing active infection, and these are seldom available. For PCR assessment, assay sensitivity along with other test variables, such as quality and preparation of DNA samples and presence of inhibitory factors in clinical specimens, can confound data interpretation (4).
In this study we use confocal immunoanalysis (CIA) and real-time PCR to visually and analytically monitor frequency and infectious load of M. genitalium in vaginal specimens among a population of Mexican-American and African-American women attending a specialized clinic for sexually transmitted diseases (STDs), who were culture positive for M. genitalium (4; J. E. Korte, J. B. Baseman, J. M. Piper, M. P. Cagle, A. E. C. Holden, S. T. Perdue, J. D. Champion, and R. N. Shain, unpublished data) This combinatorial approach enables detection and evaluation of infectious patterns and trends within individual vaginal cells infected with M. genitalium and reinforces the emergence of M. genitalium as an important cause of STDs.
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Human and mycoplasma cell cultures.
HEp-2 cell (human larynx; American Type Culture Collection) and M. genitalium strain G37 cultures were used to standardize measurements of confocal and real-time PCR protocols. HEp-2 cells were grown to 80% confluence in Dulbecco's modified Eagle's medium supplemented with 10% fetal bovine serum using T-75 vented culture flasks incubated in air-7% CO2 at 37°C. Cell monolayers were trypsin treated, split into multiple 25-cm2 vented culture flasks, and grown for 48 h to
75% confluence. M. genitalium strain G37 was grown in 100 ml of SP-4 medium in T-150 culture flasks for 72 h at 37°C, and surface-attached mycoplasmas were washed in PBS and harvested (5, 36).
DNA and RNA sample preparation. Genomic DNAs of M. genitalium and 13 other common bacterial, fungal, or parasitic species, which were obtained from the Department of Microbiology and Immunology laboratories at UTHSCSA, were isolated using Easy-DNA kit (Invitrogen), and DNA concentrations were determined by optical densities at 260 nm. The 13 distinct DNA samples were derived from Bacillus subtilis, Candida albicans, Chlamydia trachomatis, Escherichia coli 6824, Gardnerella vaginalis, Mycoplasma fermentans, Mycoplasma orale, Mycoplasma penetrans, Mycoplasma pirum, Mycoplasma pneumoniae, Neisseria gonorrhoeae, Streptococcus pyogenes, and Trichomonas vaginalis. These DNAs served as controls to determine M. genitalium primer and probe sequence specificities. Human DNA samples obtained from HEp-2 cell cultures (Easy-DNA kit; Invitrogen) and Applied Biosystems (source of human RNase P gene) were used as standards for defining human vaginal cell genomic copy numbers. DNA samples from clinical vaginal swabs were prepared as described above.
M. genitalium total RNA from strain G37 and three clinical specimens was obtained using Tri Reagent as recommended by the manufacturer (Sigma) and quantified by absorbance at 260 nm. Two micrograms of RNA was subjected to DNase I treatment (Invitrogen) to remove traces of genomic DNA and used in reverse transcription PCR.
Confocal immunoanalysis of M. genitalium infection of human cells. Multiplicities of infection (MOI) (mycoplasmas/HEp-2 cells) of 5:1, 2:1, 1:1, 1:2, and 1:10 were established in 10-ml volumes of Dulbecco's modified Eagle's medium with 10% fetal bovine serum, and incubation continued for 24 to 48 h at 37°C. CIA was employed to visually monitor the extent of mycoplasma infection of HEp-2 cells, which served as the basis for assessing M. genitalium infectious load in clinical vaginal cell specimens (6). CIA permits the generation of optical z-sections (sequential serial sections of 0.1- to 1.0-µm thickness through the z axis of individual cells) without invasive manipulation. Infected HEp-2 cell samples and controls (HEp-2 and M. genitalium alone) were processed by harvesting and dispersing cells through a 21-gauge needle until no visible cell clumps were evident. Triton X-100 (0.1%) and neutral buffered formalin (10%) were added to samples, which were incubated at 37°C for 45 min to permeabilize and fix cells. Subsequently, cell preparations were washed, centrifuged, and resuspended once in PBS; blocked with 1% bovine serum albumin (Gibco BRL) for 30 min; and washed, centrifuged, and resuspended two more times. Polyclonal rabbit anti-M. genitalium strain G37 antiserum at a 1/1,000 dilution in a volume of 1 ml was added to each of the fixed cell samples, and incubation continued at 37°C for 45 min with rocking. Individual samples were washed, centrifuged, and resuspended by gentle agitation in 1 ml of PBS to remove unbound antibodies. Samples were blocked with 1% bovine serum albumin (Gibco BRL) for 30 min and washed, centrifuged, and resuspended two more times. Secondary immunolabeling was performed with fluorescein isothiocyanate-labeled goat anti-rabbit antibody (Molecular Probes) at 1/100 dilution, along with propidium iodide (0.25 mM; Molecular Probes) to stain nucleic acids. Samples were again incubated for 45 min with rocking at 37°C, washed, centrifuged, and resuspended three times in 1 ml of PBS. After the final wash, pelleted cells were resuspended in 300 µl of Vecta-Shield mounting medium (Vector Laboratories Inc.) for slide preparation. Slides were viewed with an Olympus IX70 microscope with a UPLANAPO 60x objective and 1.3 numerical aperture, and an Olympus FV500 confocal system was used to capture and process images. Argon (emission 488) and helium-neon (emission 543) lasers were employed to visualize fluorescein isothiocyanate and propidium iodide labeling patterns, respectively. Once experimental conditions were established, which included the lack of cross-reactive fluorescence in parallel samples with M. pneumoniae-infected HEp-2 cells (data not shown), clinical vaginal specimens were processed as described above. All experiments were repeated in triplicate, and 20 fields of 8 to 10 cells per sample were examined to determine M. genitalium qualitative infectious patterns.
Electron microscopy.
Aliquots of clinical vaginal cell preparations were fixed in 4% formaldehyde and 1% glutaraldehyde, subjected to a series of alcohol dehydrations, and embedded in LR White epoxy resin (15). Embedded sections were cut into ultrathin sections, placed onto 150-mesh nickel grids, and labeled with whole organism anti-M. genitalium strain G37 primary antibodies (1/100 dilution) and 10-nm-diameter gold bead goat anti-rabbit immunoglobulin G secondary label. Samples were stained with a combination of uranyl acetate (saturated aqueous 7%) and Reynolds lead citrate. Specimens were viewed under a Philips 208S transmission electron microscope at an accelerating voltage of
60 kV.
Real-time PCR determinations. Quantification of M. genitalium genome number was achieved by real-time PCR using TaqMan chemistry (Applied Biosystems). M. genitalium species-specific oligonucleotide primers and TaqMan probe were designed for detection of M. genitalium gene gyrA (MG003; single copy) using Primer Express software (version 2.0). Forward (FOR, 5'-AATCCTTGAACGCTTCATGTTAGAAA-3') and reverse (REV, 5'-TTGTGAAAATCGAGTTCTTCGCTCT-3') sequence detection primers along with probe 5'-6-FAM-CCCACAAGAAGCAAACGATATCATCAGAA-TAMRA-3' (where FAM is 5'-fluorescein and TAMRA is 3'-rhodamine), which was localized within the amplicon, yielded an 86-bp amplicon. Human vaginal and HEp-2 cells were quantified similarly by detecting single-copy gene probe RNase P (TaqMan RNase P detection reagents [Applied Biosystems]; primer and probe sequences are proprietary) using VIC fluorophore (Applied Biosystems).
Standard curves were established by real-time PCR amplification for M. genitalium strain G37 DNA serially diluted from 107 to 1 copy per reaction using M. genitalium-specific MGgyrA primers and for human DNA diluted 108 to 1 copy per reaction using RNase P gene primers. All reactions were performed in triplicate (for exception, see below) using TaqMan Universal PCR Master Mix, a 0.5 µM concentration of M. genitalium primers, and a 0.2 µM concentration of mycoplasma probe, or RNase P gene primers and probe as suggested by the manufacturer (Applied Biosystems). We plotted threshold coefficients (CTs) against corresponding DNA concentrations, determined the linear dynamic range of DNA concentrations for both target DNAs (slope of -3.33 for mycoplasma DNA and -3.32 for human DNA assays), and observed a significant correlation coefficient (r = 0.997 for MGgyrA and r > 0.99 for RNase P gene). However, reactions containing a single M. genitalium genome yielded inconsistent results, and therefore, assays were performed 10 times. Repeatedly, 3 out of 10 reactions (30%) did not yield the expected amplicon based upon Poisson distribution of positives. Amplification conditions consisted of 50°C for 2 min, 95°C for 10 min, and 40 cycles of 95°C for 15 s and 60°C for 1 min.
Mycoplasma and human DNA templates were tested singly and in combination (multiplex reaction) with both MGgyrA and RNase P gene primers and TaqMan probes to confirm the absence of interference and cross-binding. Multiplex real-time PCR (ABI PRISM HP7900 SDS; Applied Biosystems) permitted measurements of the ratio of M. genitalium to human genomic DNA in order to quantify the dynamics of variations of mycoplasma-host cell interactions.
Reverse transcription-PCR. Reverse transcription-PCR analysis was performed based upon detection of 16S rRNA of M. genitalium. Isolated RNA was reverse transcribed with primer MGSO-2 (5'-CACCACCTGTCACTCGGTTAACCTC-3') and later, together with forward primer My-ins (5'-GTAATACATAGGTCGCAAGCGTTATC-3'), used to amplify the predicted 517-bp fragment. SuperScript First-Strand Synthesis System (Invitrogen) was used for all reverse transcription reactions. Amplified products were electrophoresed on 1% agarose alongside 100-bp DNA ladder standards (Invitrogen).
Statistical analyses. For statistical analysis of results, the correlation coefficient between M. genitalium levels as determined by CIA and real-time PCR was calculated, with each modeled as a continuous variable. A nonparametric test for trend was used to determine whether real-time PCR measurements of M. genitalium load increased across CIA categories (negative, positive, and strongly positive). The test for trend was also used to determine whether the degree of parasitism of vaginal cells increased across CIA categories. All analyses were conducted using STATA (version 7.0).
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FIG. 1. Sequential visualization of clinically derived vaginal cells using CIA. Both surface-associated and internalized immunolabeled M. genitalium cells are readily observed using 1-µm-diameter z-series optical sections. (A to F) Images are representative of a cell with a strong positive score. Mycoplasmas can be readily visualized as intense, discrete white fluorescing bodies, while the cell nucleus can be visualized using propidium iodide as detected (B to E).
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FIG. 2. Representative clinically derived vaginal cells based upon immunolabeled patterns of M. genitalium as described in Fig. 1 legend. Mycoplasmas appear as distinct fluorescent bodies as in Fig. 1, and the vaginal cell nucleus is clearly observed in each panel. CIA scores: negative (A), positive (B), and strongly positive (C).
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Transmission electron microscopy of clinical samples:.
To further visualize and confirm the existence and location of mycoplasmas in clinical samples and reinforce confocal immunolabeling patterns within individual vaginal cells, we performed immunogold electron microscopy (Fig. 3) (15). Immunogold-labeled mycoplasma cells with intact classic mycoplasma unit membranes and size variations between
300 and
1,200 nm were readily observed in clinical vaginal cell samples (23), corroborating CIA antibody label specificity and predicted absence of cell wall structures. Typically, mycoplasmas stained darker by uranyl acetate and lead citrate than surrounding host cell components, which was verified by whole organism polyclonal anti-M. genitalium antibody coupled with 10-nm-diameter immunogold beads (Fig. 3). The predominant mycoplasma cell morphology was oblong, approximately 500 by 1,000 nm, and lacked tip structures observed in broth-grown cultures.
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FIG. 3. Electron micrograph of epoxy-embedded immunolabeled clinically derived vaginal cell sample. (A) Intracellular M. genitalium cells labeled with 10-nm-diameter immunogold beads appear as two nearly complete bisected bodies and two smaller ones, each surrounded by a unit membrane and associated with gold beads. (B') Enlarged inset of panel B, revealing intact mycoplasma unit membrane. Bar = 500 nm.
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To evaluate possible interference of human DNA in M. genitalium TaqMan assays, we used a multiplex reaction, which allowed determination of copy numbers for both host tissues and M. genitalium simultaneously. This was implemented by the addition of genomic HEp-2 cell DNA to M. genitalium DNA amplification reactions. We observed no significant differences in CT of individual versus multiple simultaneous amplification reactions. In a final set of control experiments, 10-fold dilutions of M. genitalium DNA with parallel dilutions of HEp-2 cell DNA were compared in the multiplex TaqMan assay with simultaneous detection of MGgyrA and RNase P gene in order to determine whether amplification occurred more readily in combination for either primer set. No significant differences in CT were detected between pure or various dilutions of combined templates.
After establishing assay reliability and reproducibility of scoring criteria, we performed multiplex real-time PCR analysis on DNA samples from clinical specimens. Based upon standard curve quantification of M. genitalium and human cell DNA, we determined the ratio of M. genitalium to human cell genomes among negative, positive, and strongly positive samples. The median ratio of M. genitalium to vaginal cells as determined by PCR was 0.14 for the CIA negative group, while the M. genitalium/vaginal cell ratios were 0.65 and 3.21 for the CIA positive and strongly positive groups, respectively (Table 1). The test for trend in median M. genitalium/vaginal cell values across CIA categories was statistically significant (P < 0.001). The test for trend in prevalence of heavy parasitism (as defined by the percentage of evaluated cells per patient with
20 mycoplasmas) across CIA categories was also statistically significant (P < 0.001; Table 1). The quantitative real-time PCR ratios reflected general trends of infectious load throughout the entire clinical sample and correlated extremely well with CIA (r = 0.88) (Fig. 1 and 2).
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TABLE 1. Relationship between M. genitalium-based CIA scoring group, real-time PCR result, and degree of CIA-determined parasitisma
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FIG. 4. Reverse transcription-PCR of M. genitalium G37 control and individual clinical vaginal specimens. In lanes G37, A, B, and C, positive lanes (+) indicate M. genitalium 16S rRNA 517-bp fragment amplification with addition of reverse transcriptase; negative lanes (-) are without reverse transcriptase. Vaginal cells from patients A, B, and C scored positive using immunofluorescent confocal microscopy while negative sample D showed no amplification.
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In the present study we applied CIA to assess infectious patterns of M. genitalium in clinical specimens. By examining vaginal cells of infected individuals, we could spatially localize M. genitalium on vaginal cell surfaces and intracellularly evaluate the extent of parasitism which, heretofore, had been totally undefined. Representative vaginal cell images from clinical specimens of M. genitalium culture-positive women allowed us to compare mycoplasma infectious levels within specimens and between individuals. As presented in Fig. 1 and 2, the extent of M. genitalium parasitism varied from strongly positive to negative in vaginal cells within the same sample field. Moderately infected samples, designated positive by CIA, possessed predominately extracellular mycoplasmas. Interestingly, heavily parasitized strong-positive cells revealed considerably greater numbers of intracellular than surface-associated mycoplasmas. This distribution pattern suggested extensive invasion of mycoplasmas, accompanied by intracellular replication and persistence as reported by us for experimentally infected human cell cultures (6, 9). Based upon CIA, we obtained a qualitative assessment of the range of infectious patterns displayed by M. genitalium in human cells, which indicated an unexpectedly high level of parasitism.
Transmission immunoelectron microscopy confirmed the intracellular presence and cell integrity of M. genitalium in vaginal samples (Fig. 3). The size and unit membrane structure of individual mycoplasmas, along with specific gold immunolabeling and staining patterns, reinforced the integrity and morphology of M. genitalium in a clinical setting. Interestingly, the stereotypical tip organelle, flask-shaped appearance of mycoplasmas visualized in broth-passaged cultures was difficult to discern in vaginal cells. Instead, an oblong morphology was more commonly observed. This could have been due to orientation of mycoplasmas within thin sections prepared for electron microscopic analysis or may truly reflect the in situ and intracellular morphological and physiological state of mycoplasmas, which may no longer require tip-mediated cytadherence for survival and replication. We have described alternate pathways of mycoplasma-host cell interactions that are not tip mediated (1, 10), which might be more advantageous for in vivo dissemination and persistence of mycoplasmas.
To provide additional insights into the extent of M. genitalium parasitism of vaginal cells, we performed real-time PCR, which permitted quantitative analysis of the ratios of mycoplasmas to vaginal cells. M. genitalium gyrA primers were used to consistently detect 10 copies/reaction mixture while 1 genome copy could be detected 70% of the time. The correlation between real-time PCR values of mycoplasma/human genome ratios and CIA determinations was very strong (r = 0.88), and we were able to show a statistically significant trend in this ratio across CIA categories (Table 1). This suggests that either CIA or real-time PCR might be useful in identifying potentially high transmitters, assessing response to antimicrobial therapy, and evaluating levels of mycoplasma persistence, chronicity of infection and immune competence in the host. We further demonstrated by reverse transcription-PCR that M. genitalium is transcriptionally active in vaginal specimens (Fig. 4), consistent with a physiologically dynamic and replicative state (25).
The experimental strategies outlined in this report enable both qualitative and quantitative approaches to assess M. genitalium infectious patterns. The system is robust and provides an in-depth appreciation of the dynamics of M. genitalium parasitism in human tissues. In the absence of reproducible culture techniques for the isolation of M. genitalium, this combinatorial approach provides additional insights as to how M. genitalium establishes subclinical to overt infections and long-term survival. In the latter case, M. genitalium appears to persist intracellularly, thereby circumventing mycoplasmacidal drugs and immune surveillance (6, 9). Thus, latent or persistent M. genitalium infections are likely to be common although the relationships between M. genitalium in the genitourinary tract and host immunity, nutrition, physiological conditions and disease progression are unclear. Furthermore, it is uncertain whether vaginal cells that were strong positives on the basis of CIA score represent a relatively early or intermediate stage of infection, or whether they are the result of long-term persistence. In either scenario, transition from negative to positive and strongly positive CIA-based designations may reflect an inability of the host to successfully eradicate M. genitalium. Alternatively, heavily parasitized vaginal cells may be in the process of elimination through cell death or apoptosis and cell shedding. Whatever the case, in situ replication of M. genitalium and cross talk between mycoplasmas and host cells are consistent with both possibilities, and high mycoplasma load, as observed in strong-positive M. genitalium-infected vaginal cells (Fig. 1 and 2), may directly reflect an infectious cycle of mycoplasma replication inside tissue target cells. This pattern is consistent with symptomatology and seroconversion observations described in M. genitalium culture-positive women (4; unpublished data).
Therefore, the infectious process and progression of disease associated with M. genitalium are expected to be influenced by pathogen load and degree of virulence, tissue tropism, immune competence and other host status variables, and antimicrobial interventions. Currently, we are examining fundamental biological properties of recent clinical isolates of M. genitalium to identify properties which can be linked to pathogenic and transmission mechanisms.
This work was supported by grants AI 45429 and AI 41010 from the National Institute of Allergy and Infectious Diseases.
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