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Journal of Clinical Microbiology, August 2004, p. 3419-3427, Vol. 42, No. 8
0095-1137/04/$08.00+0 DOI: 10.1128/JCM.42.8.3419-3427.2004
Copyright © 2004, American Society for Microbiology. All Rights Reserved.
Laboratory of Ultrastructures, Istituto Superiore di Sanità,1 Department of Microbiology and Biomedical Sciences, University of Ancona,2 Department of Clinical Medicine, University "La Sapienza", Rome, Italy3
Received 9 October 2003/ Returned for modification 19 November 2003/ Accepted 3 May 2004
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Enterococci are gram-positive bacteria that normally inhabit the gastrointestinal tracts of many animals, including humans. They are opportunistic bacteria that become pathogens when they colonize niches where they are not normally found. Enterococci are a major cause of nosocomial infections and are increasingly detected in bloodstream and urinary tract infections and in infected surgical sites. E. faecalis is responsible for
80 to 90% of all enterococcal infections, and E. faecium accounts for most of the others; the pathogenesis of enterococcal infections is poorly understood, but several virulence factors have been proposed (14).
Enterococci are also known to produce slime, an amorphous extracellular substance found to be polysaccharidic in nature, which is one of the major components of bacterial biofilm. In fact, a biofilm is presently defined as a microbial sessile community characterized by cells that are attached to a substrate and/or to each other and that produce a "glycocalyx" matrix in which they are embedded. Thus, slime production is closely related to biofilm establishment, and it can be used as a measurement of biofilm formation. Slime production and biofilm formation have been suggested as virulence determinants of clinical isolates (2, 7, 28). In previous studies, Baldassarri and coworkers have found no relation of slime production to the source of isolation for E. faecalis, while in E. faecium, slime production was more frequent in clinical isolates than in environmental strains or isolates from healthy individuals (1). Enterococci are known for their acquired multidrug resistance, and the recent emergence of vancomycin-resistant strains has generated major concern among clinicians (4, 18). Enterococci harbor transferable genetic elements, which have an unusually broad host range and can even be transferred to both gram-negative and gram-positive bacterial species (6). Conjugation systems involving plasmids and transposons are abundant in these organisms and contribute to the dissemination of both antibiotic resistance and virulence factors (6). In particular, the sex pheromone system of E. faecalis, first described by Dunny et al. (9), involves the production of pheromones by recipient strains, each being specific for a particular plasmid or a group of related plasmids (11). Donor strains exposed to a pheromone are induced to synthesize a specific plasmid-encoded surface protein, designated "aggregation substance" (AS), which facilitates the initiation of mating pair formation (5). In E. faecalis, four plasmids (pAD1, pCF10, pPD1, and pAM373) encoding AS have been described (6), AS-encoding genes have been sequenced, and highly conserved regions have been used to generate primers specific for AS (12). Sex pheromone plasmids have also been described in E. faecium, in which they have been found to be associated with vancomycin resistance (15, 16, 23).
Many enterococcal infections are endogenous, originating from the intestinal tract, and several experimental data suggest that AS may be involved in translocation across the intestinal barrier (14, 29). AS promotes enterococcal adhesion to and internalization into cultured human cells (21, 23, 26) either directly or simply by increasing the number of organisms taken up as a clump (C. M. Waters, C. L. Wells, and G. M. Dunny, Abstr. 6th Am. Soc. Microbiol. Conf. Streptococcal Genetics, abstr. 121, 2002). AS also promotes survival of E. faecalis in mouse peritoneal macrophages (13). The sequence of the structural gene for the pAD1-encoded AS revealed the presence of two Arg-Gly-Asp motifs (30), recognized by integrins, a family of eukaryotic receptors expressed on leukocytes, thrombocytes, and endothelial and various epithelial cells, including intestinal cells (19).
In this study, E. faecalis and E. faecium strains isolated from occluded biliary stents removed from patients with obstructive jaundice were investigated for the presence of AS genes and the ability to adhere to Caco-2 cells and to produce biofilms. The susceptibilities of isolates to various antibiotics were also evaluated.
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Bacteria were grown in brain heart infusion (BHI) broth or agar (Oxoid Ltd., Basingstoke, United Kingdom). For the determination of slime production, strains were grown in tryptone soy broth (TSB; Oxoid) supplemented with 1% glucose (1).
Antibiotics and susceptibility testing. Antibiotic resistance was detected by the Kirby-Bauer method according to standard procedures approved by the NCCLS in 2000. Antibiotic disks were obtained from Oxoid.
Slime production assay. Biofilm formation was tested as previously described (1). Briefly, bacteria were grown overnight at 37°C with no shaking in 2 ml of TSB containing 1% glucose. The culture was diluted 1:10 in fresh TSB, and 200 µl of the suspension was used to inoculate sterile 96-well polystyrene microtiter plates (Corning Costar, Milan, Italy). After overnight incubation at 37°C in 5% CO2, the wells were washed three times in phosphate-buffered saline, dried in an inverted position for 1 h at 50 to 60°C, and stained with Hucker's crystal violet. After the staining, the optical densities (OD) of the biofilms were read at a wavelength of 570 nm by a spectrophotometer (Novapath Microplate Reader; Bio-Rad Laboratories Inc.). The slime index was defined as an estimate of the density of the biofilm generated by a culture with an OD at 600 nm of 0.5 [slime index = mean OD of the biofilm x (0.5/mean OD growth)].
Pheromones and clumping assay.
Pheromone-containing filtrates were prepared from strains of E. faecalis JH2-2 and OG1RF grown overnight in BHI broth at 37°C with shaking. Late-stationary-phase cultures were obtained by inoculating 1 ml of the overnight culture in 100 ml of fresh BHI broth and incubating it at 37°C with shaking to a final concentration of
5 x 108 bacteria per ml. The cultures were centrifuged at 7,000 x g for 10 min at 20°C, and the supernatants containing pheromones were then filtered through 0.45- and 0.22-µm-pore-size filters (Millipore, Milan, Italy). The filtrates were autoclaved at 121°C for 15 min and stored at 4°C prior to use. Clumping of clinical enterococci was evaluated by adding 20 µl of stationary-phase culture to 0.5 ml of pheromone-containing filtrate. Negative controls were prepared by replacing pheromone-containing filtrates with BHI broth. Samples were incubated at 37°C for 3 h with shaking, mounted on glass slides, and observed by phase-contrast microscopy.
Cell line. Cells from the human colon carcinoma enterocyte-like cell line Caco-2 (ATCC HTB37) were routinely grown in 25-cm2 plastic tissue culture flasks (Corning Costar) and incubated at 37°C in a humidified atmosphere of 5% CO2 in air. The culture medium was Dulbecco's modified Eagle's medium (DMEM) containing 25 mM glucose, 4 mM L-glutamine, and 3.7 mg of sodium bicarbonate per ml (Euroclone, West York, United Kingdom) with 1% nonessential amino acids supplemented with 10% fetal bovine serum (Euroclone), 100 U of penicillin per ml, and 100 µg of streptomycin per ml.
Adhesion to Caco-2 cells.
Confluent cell monolayers were trypsinized, counted, and adjusted at a concentration of
2.5 x 105 per ml in DMEM. One milliliter of the cell suspension was dispensed into each 22-mm-diameter well of a 12-well tissue culture plate (Corning Costar) and incubated to obtain semiconfluent monolayers at 37°C. The cells were washed with unsupplemented DMEM prior to bacterial infection. A late-exponential-phase enterococcal culture was diluted 1:10 in 10 ml of a 1:1 mixture of pheromone-containing filtrates and fresh BHI broth and incubated at 37°C with shaking to exponential-phase growth (
5 x 108 bacteria per ml). Then, 1 ml of the bacterial suspension, vortexed and diluted in DMEM, was added to each well at a multiplicity of infection of 160 bacteria per cell. The plates were then incubated for 1 h at 37°C in 5% CO2. After incubation, the wells were rinsed three times with phosphate-buffered saline and the cells were lysed with Triton X-100. The number of CFU of bacteria was determined after plating of suitable dilutions of the lysates on BHI agar and incubation for 24 to 36 h at 37°C. Bacterial adherence was quantified by determining the ratio of cell-associated CFU to the total CFU of the initial inoculum.
PCR and restriction analysis of PCR products. For total DNA extraction, the strains were grown overnight in BHI broth containing 0.5% glycine at 37°C. One milliliter of overnight culture was centrifuged at 2,739 x g for 10 min, and the pellet was resuspended in 1 ml of salt-Tris-EDTA buffer containing 20% saccharose and 2.5 mg of lysozyme/ml. Samples were incubated at 37°C for 60 min and centrifuged at 18,000 x g for 3 min. The pellet was resuspended in 1 ml of lysis buffer and incubated at 60°C for 1 h. The temperature was then raised to 95°C for 10 min for proteinase K inactivation and DNA denaturation.
PCR amplifications were performed using the Gene Amp PCR System 2400 (Perkin-Elmer Cetus, Norwalk, Conn.). Primers (Table 1) included those reported by Eaton and Gasson (12) internal to highly conserved regions in the AS genes of pAD1, pPD1, and pCF10 (agg primers) and the primers internal to the AS structural gene prgB and the regulatory prgX gene of pCF10 (16).
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TABLE 1. PCR primers used in this study
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Plasmid analysis, PFGE, and Southern hybridization. Plasmid DNA was extracted as previously described (3). The presence of plasmid DNA was monitored by 0.8% agarose gel electrophoresis. Genomic DNA for pulsed-field gel electrophoresis (PFGE) was prepared by following standard procedures. The chromosomal fragments obtained after restriction with SmaI (New England Biolabs, Beverly, Mass.) were separated using a CHEF Mapper system (Bio-Rad Laboratories). The SmaI-restricted DNA, obtained by PFGE, and the plasmid DNA were transferred onto nylon membranes and hybridized with a probe following standard procedures. Low Range PFG Marker (New England Biolabs) and Marker II (Roche Molecular Biochemicals) were used as molecular weight standards.
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TABLE 2. Antibiotic resistance, presence of plasmid DNA, slime production, clumping, presence of AS genes, and Southern hybridization with a probe internal to the prgB gene of pCF10 in enterococci isolated from occluded biliary stents
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Slime production. All clinical enterococcal isolates were tested for slime production. Nine E. faecalis strains (EFS-12, EFS-16, EFS-20, EFS-28b, EFS-30d, EFS-32, EFS-35, EFS-30, and EGL-19) and one E. faecium strain (CIUM-34) were strong producers (Table 2).
Enterococcal clumping. To assess responses to pheromones, the 19 enterococcal strains were microscopically examined for clumping after growth in the presence of pheromone-containing supernatants of E. faecalis JH2-2 and E. faecalis OG1RF. Among all isolates, seven strains (four E. faecalis [EFS-27b, EFS-30d, EFS-38, and EGL-19] and three E. faecium [EFM-26, CIUM-22, and CIUM-34]) were clumping positive. Growth of strains in the presence of pheromones gave rise to different levels of aggregation: some strains elicited a barely detectable effect, other strains generated small aggregates, while others did not aggregate at all (Table 2). Strains also exhibited different aggregation patterns when exposed to pheromone-containing supernatants of strain JH2-2 or OG1RF; moreover, E. faecium isolates generated aggregates smaller than those of E. faecalis (Fig. 1).
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FIG. 1. Clumping phenomenon in enterococci induced by the presence of pheromone-responsive plasmids produced by E. faecalis strain JH2-2 or OG1RF. (a) E. faecalis EFS-27b (JH2-2); (b) E. faecalis EFS-30d (JH2-2); (c) E. faecalis EGL-19 (OG1RF); (d) E. faecium CIUM-22 (JH2-2); (e) E. faecium CIUM-34 (JH2-2); (f) E. faecium LS10(pBRG1) (JH2-2).
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FIG. 2. Adherence of clumping-negative and clumping-positive E. faecalis (A) and E. faecium (B) strains to Caco-2 cells before and after induction with sex pheromones produced by E. faecalis strain JH2-2 or OG1RF. The efficiency of adherence is expressed as the percentage of the inoculum remaining attached to eukaryotic cells and was calculated as follows: percentage of adhering bacteria = (number of adherent bacteria x 100)/number of bacteria in inoculum.
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FIG. 3. PFGE and Southern hybridization of SmaI-digested genomic DNA and plasmid DNA from enterococcal isolates with a psoralen-biotin-labeled probe specific for prgB. (A and B) PFGE patterns of genomic DNA (A) and corresponding hybridizing bands (B). (C and D) PFGE profiles of plasmid DNA (C) and corresponding hybridizing bands (D). Lanes: 1, CIUM22; 2, CIUM34; 3, EFM26; 4, EFS12; 5, EGL19; 6, EFS20; 7, EFS27B; 8, EFS28B; 9, EFS30D; 10, EFS38; 11, OG1RF(pCF10); 12, OG1RF; M1, Low Range PFG Marker; M2, Marker II. The arrows indicate chromosomal bands (B, lanes 4, 5, and 6) or plasmid bands (B and D, lanes 7, 8, 9, and 11) hybridizing with the prgB probe.
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1,170 bp and the appearance of two new fragments (
730 and 440 bp).
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FIG. 4. Restriction analysis of PCR products obtained using primers internal to prgB and agg genes of clumping-positive (EFS-27b, EFS-30d, and EGL-19) and clumping-negative (EFS-12, EFS-20, and EFS-28b) clinical enterococcal isolates and of E. faecalis OG1RF(pCF10). (A) DraI digests from 427-bp amplicons (prgB). (B) EcoRI digests from 1,553-bp amplicons (agg). Lanes: 1, EFS-28b undigested; 2, EFS-28b digested; 3, EFS-30d undigested; 4, EFS-30d digested; 5, OG1RF(pCF10) undigested; 6, OG1RF(pCF10) digested; 7, EFS-20 undigested; 8, EFS-20 digested; 9, EFS-27b undigested; 10, EFS-27b digested; 11, EFS-12 undigested; 12, EFS-12 digested; 13, EGL-19 undigested; 14, EGL-19 digested; 15, Marker Gene Ruler 100-bp DNA ladder. The arrows indicate the sizes of fragments in base pairs.
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In this study, enterococcal strains isolated from occluded biliary stents, all resistant to antibiotics, were studied for slime production and response to sex pheromones produced by E. faecalis JH2-2 and E. faecalis OG1RF.
As far as slime production is concerned, 9 of 12 E. faecalis strains were strong producers compared to 1 of 7 E. faecium strains. This finding is particularly interesting because slime production in enterococci has not been extensively described (1). In fact, the production of slime exhibited by most of our E. faecalis isolates could play a significant role in the colonization and occlusion of biliary stents. This role in the impairment of indwelling medical devices is well established for staphylococci, for which slime is considered a significant biofilm component and a determining factor involved in the occlusion of intravascular catheters (8).
Our data also demonstrate a pheromone response in enterococcal strains isolated from occluded biliary stents, suggesting that sex pheromone response may play a role in biliary stent occlusion. Actually, clumping assays demonstrated a response to pheromones produced by E. faecalis JH2-2 and/or E. faecalis OG1RF in 7 (4 E. faecalis and 3 E. faecium) of 19 strains. Interestingly, clumping-positive E. faecium strains generated aggregates that were different (i.e., smaller) from the large aggregates generated by clumping-positive E. faecalis strains and similar to those of E. faecium LS10 carrying the pheromone-susceptible plasmid pBRG1 (23) and that showed a greater ability to adhere in vitro to cultured intestinal cells (Caco-2) than clumping-negative strains. Adherence to Caco-2 cells by clumping-positive E. faecalis and E. faecium strains was enhanced after induction with pheromones. These findings are relevant, especially for E. faecium species, in which a response to sex pheromones has rarely been described. Moreover, among tested enterococci, PCR products of the expected size were obtained in six E. faecalis strains (including three clumping-positive and three clumping-negative strains, all carrying plasmid DNA) using primers internal to AS genes of E. faecalis. No PCR products were obtained with the same primers among E. faecium isolates, either in clumping-positive or clumping-negative strains, only two of which carried plasmid DNA.
Among agg/prgB-positive E. faecalis clinical isolates, restriction profiles obtained by digesting PCR products with DraI and ScaI were identical to those obtained from E. faecalis OG1RF(pCF10), whereas EcoRI profiles showed a three-band difference, suggesting the presence of one more EcoRI site. All agg/prgB-positive E. faecalis strains were also positive in Southern hybridization experiments with SmaI-restricted genomic DNA, using as a probe a DNA fragment, amplified by PCR, internal to prgB of E. faecalis OG1RF(pCF10). The prgB probe strongly hybridized with plasmid DNAs from three E. faecalis strains, suggesting a plasmid location. These results strongly suggest that these clinical isolates contain AS genes. Considering that agg primers amplify a highly conserved 1,553-bp region (12), the slight difference revealed only by EcoRI restriction analysis might be attributed to a minor mutational event.
The agg/prgB-positive E. faecalis strains were negative for prgX, the gene involved in negative regulation of the pheromone response in pCF10; among these, three strains were clumping positive, and their adhesion to Caco-2 cells was enhanced by sex pheromones, suggesting that AS was expressed. Apart from the possible presence of a different gene, an alternative explanation might be found in the occurrence of point mutations in the prgX genes of these strains, affecting the affinity of the prgX primers for the target gene. The remaining strains were clumping negative, and their adhesion to Caco-2 cells was not enhanced by sex pheromones, suggesting that AS is not expressed. Another significant issue is represented by the four clumping-positive but PCR- and Southern hybridization-negative strains (one E. faecalis and three E. faecium strains), whose adhesion to Caco-2 cells increased after induction with sex pheromones. As for E. faecalis, it can be hypothesized that the AS gene was not recognized by primers, while for E. faecium, it is possible that clumping is AS independent, even if E. faecium LS10(pBRG1) was clumping and agg positive.
Overall, our results emphasize that slime production and/or response to pheromones is present in E. faecalis and E. faecium strains isolated from occluded biliary stents. Furthermore, these data support a pheromone response by enterococcal strains involved in clogging of biliary stents, suggesting the possible implication of the aggregation substance as one of the most important causative factors in the occlusion process. It may also be hypothesized that enterococci carrying AS genes and/or producing slime have a selective advantage in colonizing biliary stents.
This study was supported in part by the European research project Antimicrobial Resistance Transfer from and between Gram-Positive Bacteria of the Digestive Tract and Consequences for Virulence, contract QLK2-CT-2002-00843 "ARTRADI."
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