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Journal of Clinical Microbiology, January 2005, p. 132-139, Vol. 43, No. 1
0095-1137/05/$08.00+0 doi:10.1128/JCM.43.1.132-139.2005
Copyright © 2005, American Society for Microbiology. All Rights Reserved.
Department of Internal Medicine, Kaohsiung Medical University Hospital,1 School of Technology for Medical Sciences, Kaohsiung Medical University, Kaohsiung,3 Departments of Dermatology,2 Internal Medicine, Pingtung Hospital, Department of Health, Executive Yuan, Pingtung,4 Division of Clinical Research, National Health Research Institute, Taipei, Taiwan5
Received 2 July 2004/ Returned for modification 10 August 2004/ Accepted 1 September 2004
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It was estimated that MRSA strains accounted for 84% of hospital-acquired S. aureus isolates and 45% of non-hospital-acquired S. aureus isolates in Taiwan in 1998 (12). Recent reports from Taiwan that isolates causing 27.8% of community-acquired S. aureus infections in children were resistant to oxacillin, that 35.4% of community-acquired MRSA isolates were from children without any predisposing risk factors (41), and that severe diseases such as infective endocarditis have resulted from community-acquired MRSA (19) should alert medical professionals and the community alike to the need for the country to face the problem of MRSA within the community.
Community-acquired MRSA (C-MRSA) in the United States and Australia had a staphylococcal cassette chromosome mec (SCCmec) type (i.e., type IV) (30) different from those of the health care setting-associated MRSA (H-MRSA) strains, whose SCCmec types were mainly types I to III (11, 14). Although a previous study revealed that SCCmec types III and IIIA were the main types of clinical MRSA strains in Taiwan and China (1), the SCCmec types of C-MRSA strains in Taiwan have not been studied. It is of interest to determine whether SCCmec type IV, which represents a particular clone that is disseminated in the community, is prevalent in Taiwan, where there is a very high prevalence MRSA and a high extent of multidrug resistance among hospital MRSA isolates (8, 41).
Nasal S. aureus colonization has been shown to be a risk factor for community-acquired and nosocomial infections (7, 17, 40). Previous studies of nasal MRSA colonization found that the rates of colonization with MRSA among community residents without any predisposing factors were less than 1% in New York City; San Francisco, Calif.; and Portugal (6, 33). Taiwan has high percentages of MRSA in hospitals and a high extent of antibiotic use in the community (20) and is under an increasing threat from community-based MRSA infections (12, 19, 41). This study evaluated the burden of S. aureus resistance in the community, the potential risk factors for nasal S. aureus and MRSA colonization, and the molecular characteristics of MRSA isolates from the community and clinical settings.
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Microbiological study. All study participants underwent swabbing of the anterior 1.5 cm of the nasal vestibule of both nares with a sterile swab (CultureSwab Transport System; Difco, Detroit, Mich.). The swab specimen was streaked onto two mannitol salt agar plates (Difco, Sparks, Md.), one of which was supplemented with oxacillin (4 µg/ml). These inoculated plates were incubated at 37°C for 48 h, after which morphological and Gram stain examinations were conducted. Colonies of interest were selected for further inoculation onto sheep blood agar plates (Becton Dickinson Microbiology Systems, Cockeysville, Md.) at 37°C overnight. The coagulase test (Coagulase Plasma System; Difco) was used to identify S. aureus. Methicillin-susceptible S. aureus (MSSA) was preliminarily detected by its characteristic growth on mannitol salt agar and the absence of growth in the presence of oxacillin, while growth on both agar plates was presumed to indicate the presence of MRSA. All isolates were inoculated onto Mueller-Hinton agar (Becton Dickinson Microbiology Systems) containing 6 µg of oxacillin per ml and 4% NaCl to confirm methicillin resistance (29).
Antimicrobial susceptibility testing. All S. aureus isolates were tested for their susceptibilities to oxacillin, erythromycin, clindamycin, trimethoprim-sulfamethoxazole, vancomycin, rifampin, tetracycline, ofloxacin, and gentamicin by the NCCLS agar disk diffusion method (28). The susceptibilities of the isolates to moxifloxacin were tested by incubation with Mueller-Hinton agar containing 2 µg of moxifloxacin per ml at 37°C for 24 h. Etest strips (PDM Epsilometer; AB Biodisk, Solna, Sweden) were used to confirm the isolates' resistance to moxifloxacin.
SCCmec typing by multiplex PCR. Multiplex PCR for SCCmec typing was performed by the methods of Oliveira and de Lencastre (31). The mecA gene and seven different loci (loci A to H) along the mecA gene cassette were selected for amplification by PCR. The primer sets specific for these loci were as follows: for type I-specific locus A, primers F5'-TTCGAGTTGCTGATGAAGAAGG-3' and R5'-ATTTACCACAAGGACTACCAGC-3'; for type II-specific locus B, primers F5'ATTCATCTGCCATTGGTGATGC-3' and R5'-CGAATGAAGTGAAAGAAAGTGG; for type II- and III-specific locus C, primers F5'-ATCAAGACTTGCATTCAGGC-3' and R5'-GCGGTTTCAATTCACTTGTC; for type I-, II-, and IV-specific locus D, primers F5'-CATCCTATGATAGCTTGGTC-3' and R5'-CTAAATCATAGCCATGACCG-3'; for type III-specific locus E, primers F5'-GTGATTGTTCGAGATATGTGG-3' and R5'-CGCTTTATCTGTATCTATCGC-3'; for type III-specific locus F, primers F5'-TTCTTAAGTACACGCTGAATCG-3' and R5'-GTCACAGTAATTCCATCAATGC-3'; for nonspecific locus G, primers F5'-CAGGTCTCTTCAGATCTACG-3' and R5'-GAGCCATAAACACCAATAGCC-3'; for nonspecific locus H, primers F5'-CAGGTCTCTTCAGATCTACG-3' and R5'-GAAGAATGGGGAAAGCTTCAC-3'; and for the specific mecA gene, primers 5'-TCCAGATTACAACTTCACCAGG-3' and R5'-CCACTTCATATCTTGTAACG-3'.
Genomic fingerprinting by PFGE. Total DNA was prepared and pulsed-field gel electrophoresis (PFGE) was performed as described previously (22). The restriction enzyme SmaI was used at the temperature proposed by the manufacturer. The band patterns were visually compared and classified as indistinguishable (no differences), closely related (clonal variants, one to three band differences), possibly related (four to six band differences), and unrelated (more than six band differences) by the use of previously described criteria (38). Isolates with banding patterns that differed from the main pattern by up to three bands were considered to represent subtypes of the main type.
To identify PFGE polymorphisms, each sample was analyzed by using Molecular Analyst Fingerprinting, Fingerprinting Plus, and Fingerprinting DST software (Bio-Rad Laboratories, Richmond, Calif.). The grouping method was performed to deduce a dendrogram from the matrix by the unweighted pair group method with arithmetic averages clustering technique after calculation of similarities by using the Pearson correlation coefficient between each pair of organisms, and the PFGE patterns were distinguished at the 70% similarity level.
Questionnaire and statistical analysis. Each adult participant completed a standardized questionnaire. The questionnaires for the children were completed by their parents. The participant's age, gender, and medical history over the preceding 3 months, including previous hospitalization, medication history prior to receiving the screening test, and any underlying diseases, were correlated with the S. aureus colonization status. Chart reviews were conducted for the nursing home, hemodialysis, and hospitalized subjects.
Comparison of categorical variables and percentages between groups was done by the Pearson chi-square test or Fisher's exact test, as appropriate. Relative risk and 95% confidence intervals (CIs) were also calculated. Multivariate analysis was performed by using a stepwise logistic regression model. The threshold for a significant difference was designated a P value of <0.05. Factors associated with S. aureus or MRSA colonization with P values <0.05 were further studied by using a logistical regression model. All tests were two tailed.
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TABLE 1. Demographics, medical information, and rates of S. aureus and MRSA colonization in the community and health care facility-related subject groups
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TABLE 2. Rates of colonization with S. aureus and MRSA between the community and health care facility-related subjects
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The H-MRSA rates ranged from 5 to 11% (average, 6.9%). The highest MRSA colonization rate was seen among subjects recruited from chronic-care facilities (11%). No significant differences in the rates of H-SA (P = 0.230) and H-MRSA colonization (P = 0.169) between patients from a chronic-care facility, a hemodialysis center, and acute-care wards and health care workers were observed. However, among the subjects with H-SA, the ratio of H-MRSA colonization/H-SA was significantly higher among patients than among health care workers (P = 0.042) (Table 2).
Risk factors for C-SA and C-MRSA colonization. Analysis of community cases revealed that age group (P < 0.001), the absence of diabetes mellitus (DM) (P = 0.022), and nasal illness (P = 0.05) (Table 3) were significantly associated with C-SA. Further analysis of these factors by use of a logistic regression procedure revealed that age and nasal illness were significantly related to nasal S. aureus colonization (P < 0.001 and P = 0.017, respectively). Subjects aged 0 to 10, 11 to 20, and 71 to 80 years had higher estimated probabilities of C-SA (37.6, 27.3, and 24.4%, respectively) than other age groups (18%). A relatively high frequency of C-SA was observed for subjects aged <10 years (95% CI, 0.328 to 0.425), 11 to 20 years (95% CI, 0.242 to 0.305), and 71 to 80 years (95% CI, 0.124 to 0.403).
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TABLE 3. Association of C-SA and C-MRSA with underlying diseases among community subjects
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Antimicrobial susceptibility. All 538 S. aureus isolates were susceptible to vancomycin, while 91 (16.9%) isolates were MRSA. Resistance to erythromycin, clindamycin, tetracycline, and gentamicin was found in 55.8, 37.5, 60.4, and 19.5% of the isolates, respectively. Less than 5% of isolates were resistant to trimethoprim-sulfamethoxazole, rifampin, ofloxacin, and moxifloxacin. For C-MSSA and C-MRSA colonization isolates, the rates of resistance to erythromycin (48.1 and 90.6%, respectively), clindamycin (25.8 and 90.6%, respectively), trimethoprim-sulfamethoxazole (12.8 and 35.9%, respectively), tetracycline (53.1 and 95.3%, respectively), ofloxacin (1 and 12.5%, respectively), and gentamicin (8.8 and 64.1%, respectively) were significantly different (Table 4).
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TABLE 4. Antimicrobial susceptibilities of MRSA isolates from community and hospital-related colonizers and hospitalized patints
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TABLE 5. SCCmec types of MRSA isolates from community and hospital-related colonized subjects and from hospitalized patients
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FIG. 1. Identification of SCCmec types by multiplex PCR. The lane on the left contains a molecular weight marker. Loci specific to a SCCmec type by PCR were as follows: A, type I; B, type II; C, types II and III; D, types I, II, and IV, E, type III; F, type III; G and H, nonspecific for a SCCmec type.
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FIG. 2. PFGE patterns of 91 nares-colonizing MRSA isolates and 17 clinical MRSA isolates from a regional hospital. Similarities >70% represent the clonal spread of strains. The first letter of each isolate designation indicates the origin of the isolate, as follows: colonization isolates from community residents (A), students (S), patients in chronic-care facilities (C), patients in acute-care wards (P), health care workers (N) and hemodialysis patients (U) and clinical isolates from infected hospitalized patients (H).
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The rates of drug resistance were significantly lower among MRSA isolates from subjects without risk factors than among isolates from subjects who had any predisposing risk factor or who were health care workers, as follows: rifampin, 2.4 and 18.8%, respectively; ofloxacin, 9.5 and 30.4%, respectively; and moxifloxacin, 2.4 and 17.4%, respectively. For the other antimicrobial agents tested, no differences in resistance rates were found between subjects with and without risk factors (rates of resistance to clindamycin, 92.9 and 82.6%, respectively; rates of resistance to erythromycin, 88.1 and 92.8%, respectively; rates of resistance to tetracycline, 95.2% and 89.9%, respectively; rates of resistance to gentamicin, 64.3% and 71.0%, respectively).
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In this study, subjects whose activities involved contact with a health care facility had a significantly higher rate of MRSA colonization than community subjects, even though the health care-facility related subjects had a lower overall S. aureus colonization rate than their community counterparts. Age was found to be the most significant factor for S. aureus colonization in this study. Recent admission to a hospital and gastrointestinal diseases were the most important factors associated with MRSA colonization among community subjects. The finding that recent admission was the major factor associated with MRSA colonization in community subjects is consistent with the findings of previous reports suggesting that C-MRSA might originate from contact with a hospital environment (6, 8, 36) but is contrary to the findings of an earlier report (26) that did not show any significant risk factors differentiating patients with C-MRSA and MSSA infections.
The rate of resistance to all the antimicrobials tested except vancomycin among our MRSA nasal isolates (over 10%) was higher than that in a previous study of urban poor individuals from San Francisco, where erythromycin and ciprofloxacin were the only two drugs to which rates of resistance were >10% (6). The rates of multiple-drug resistance among our MRSA isolates were also higher than those presented in other reports (3, 9, 21), in which most clinical C-MRSA isolates were susceptible to various antibiotics except beta-lactams. The rate of resistance to clindamycin (92.9%) among the C-MRSA isolates from subjects without risk factors in this study was also higher than that in a study from the United States (10), in which most C-MRSA isolates from subjects without risk factors were susceptible to clindamycin. The high rate of resistance to clindamycin among our community MRSA isolates (90.6%) was similar to the rate of resistance among clinical MRSA isolates in Taiwan (94.2%) (13, 41), indicating that clindamycin resistance is quite common among community and health care facility-related MRSA isolates in Taiwan.
This study found that recent receipt of medical services was the major factor associated with MRSA colonization as well as the high level of multiple-drug resistance in MRSA nasal isolates. These findings may be explained by the high rate of antibiotic use in the Taiwan community, as shown in a previous study (20) in which antimicrobial activity in urine was detected in 55.2% subjects on arrival at an emergency department and in 7.6% of high school students. Another study found that the proportion of patient visits resulting in antimicrobial therapy in primary care units was 13.4% in Taiwan and that 31.3% of patients with a diagnosis of the common cold received antibiotic treatment (5). These findings are indicative of the presence of strong selective pressure from antimicrobial use in the community.
We identified four factors which support the occurrence of transmission of MRSA outside the hospital setting. First, there was a high rate (3.41%) of MRSA colonization among community residents who did not have health care setting-related predisposing factors. Second, MRSA isolates from community residents with colonization had antibiograms which were different from those of the clinical hospital strains with regard to trimethoprim-sulfamethoxazole, rifampin, ofloxacin, and moxifloxacin resistance. Third, most of the MRSA isolates responsible for colonization of community subjects were of SCCmec type IV, whereas most of the clinical hospital strains were of SCCmec type III. Fourth, molecular typing of MRSA isolates by PFGE revealed that three clusters of MRSA isolates were mainly from colonized community residents, and no clinical hospital MRSA isolates were in the clusters mainly formed by colonizing community strains. This result suggests that the transmission of MRSA from the clinical setting to the community did not comprise the main source of MRSA colonization in the community.
With regard to the significant difference in trimethoprim-sulfamethoxazole, rifampin, ofloxacin, and moxifloxacin resistance between community colonizers and clinical hospital strains, the MRSA isolates from health care facility-related colonizers had antimicrobial resistance rates between the rates for the other two groups (Table 5). High proportions of the MRSA isolates from health care facility-related colonizers were of SCCmec type IV and type III, and these were predominantly community colonizing strains and clinical hospital strains, respectively. The mixed characteristics of the health care facility-related colonizing strains and PFGE clusters I, III, and IV among both community and heath care facility-related isolates suggest that MRSA colonization among health care facility-related subjects may be a route of transmission from hospitals to the community.
The risk factor assessment used in this study had several limitations. The proportion of study participants with recent antibiotic usage might have been underestimated because many patients might not have recognized that they had taken antibiotics, especially when the drugs were prescribed in a clinic as opposed to a hospital. The tracing of a 3-month medical history in this study was intended to limit the recall bias that might result from the review of a longer period. However relevant, data on the medical history from more than 3 months earlier could have been neglected, and these data may have been relevant, as MRSA colonization can continue for several years (2). Dermatological factors, like atopic eczema, which have been reported to be associated with MRSA carriage (39) were not considered in this study. Another possible risk factor for MRSA carriage not considered was the possibility that household members or friends of the study subjects may have been health care workers or may have had chronic diseases requiring frequent hospital visits. Heterogeneous drug resistance (heteroresistance) might not have been effectively detected by our method (4, 25), and a small percentage of isolates that carry the mecA gene are phenotypically susceptible to methicillin, which may have resulted in underestimation of the rate of MRSA colonization in the community. Nevertheless, the rate of MRSA colonization was found to be higher in this community surveillance study than in recent studies in other regions (6, 33, 36).
The presence of penicillinase-producing S. aureus strains in hospitals in the early 1950s was followed by a high prevalence of penicillin resistance among hospital and community strains in the 1970s (15). The high prevalence of MRSA in hospitals and recent increases in reports of community MRSA infections without traditional health care facility-related risk factors (10) suggest that a similar transfer of drug resistance from hospitals to the community may occur soon in Taiwan. Regardless of the impact of the health care facility-related cases, our findings that 3.5% of the community population was colonized with MRSA and that 3.4% of MRSA-colonized subjects had no predisposing risk factors indicate that the burden of MRSA in the community is heavy in Taiwan. The MRSA isolates examined in this study showed high rates of resistance to most antistaphylococcal agents, reflecting the difficulty in providing effective antimicrobial therapy if infections due to such resistant pathogens were to occur. The findings that the health care setting-related group had a higher rate of MRSA colonization than the community group and that MRSA colonization was related to recent hospitalization indicate the need for education and infection control measures for health care workers, patients returning from hospitals to the community, and individuals receiving medical treatment. Such measures may reduce the levels of transmission of MRSA from health care settings to the community. The implications of MRSA colonization, infection, and treatment should be explained to the patient and close relatives who assist with the patient's bodily care. Although routes of MRSA transmission from the hospital setting to the community exist, the molecular evidence of the presence of colonizing strains in the community and the high rate of MRSA colonization among people without a relationship to the hospital setting suggest that further measures to control antibiotic usage to reduce selective pressure for antibiotic resistance are urgently needed in the community as well as in hospitals.
We thank Janice Lo of the Department of Health in Hong Kong for critical review of this study.
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