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Journal of Clinical Microbiology, October 2005, p. 5230-5237, Vol. 43, No. 10
0095-1137/05/$08.00+0 doi:10.1128/JCM.43.10.5230-5237.2005
Copyright © 2005, American Society for Microbiology. All Rights Reserved.
Department of Dermatology, University of Schleswig-Holstein, Campus Kiel, Kiel, Germany,1 Institute of Microbiology and Hygiene, Charité, Berlin, Germany2
Received 5 March 2005/ Returned for modification 22 April 2005/ Accepted 4 July 2005
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A diagnosis of moccasin-type tinea pedis was made because of the typical clinical morphology of his plantar lesions. To verify this diagnosis mycologically, scales were scraped from his right planta pedis and used as clinical specimens for microscopic inspection and cultures following our routine procedure for the detection of fungi in lesional skin. Direct microscopic examination of the scales macerated with 15% KOH revealed colorless short hyphal elements. The scales were planted on Sabouraud glucose agar (bioMérieux, Marcy l'Etoile, France) with 400 mg liter1 cycloheximide (AppliChem, Darmstadt, Germany) plus antibiotics and on a Sabouraud glucose agar slant with antibiotics only. Identical colonies developed at two of three points of inoculation only on the plate containing cycloheximide within 14 days at 26°C; the colonies were similar to those of T. terrestre or an unpigmented Trichophyton mentagrophytes strain. For an exact identification, our isolate was then submitted to extensive further mycological investigations (see below).
Treatment of our patient was initiated at his first visit with cyclopiroxolamine topically plus terbinafine 250 mg daily as an oral therapy for 10 weeks. The following visits showed a gradual clinical healing of the skin lesions, and repeated control specimens thereafter were negative for fungi.
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Molecular biology. (i) Strains. In total 45, anthropophilic, zoophilic, and geophilic dermatophyte species, including the new isolate, were analyzed (Table 1).
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TABLE 1. Strains analyzed in this study
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(iii) DNA amplification and sequencing. PCR of the ITS region was performed with the primer pair LSU266 and V9D (11). Sequence analysis was done with the internal primers ITS4 and ITS5 and an automated sequencing system (Beckman-Coulter, Fullerton, CA).
The sequences of the ITS1 and ITS2 regions of the new isolate were submitted to a BLASTn search (compares nucleotide similarities) by using the National Center for Biotechnology Information database (www.ncbi.nlm.nih.gov/BLAST) to find the next most closely related fungal species. On the basis of this result and the phenotypic features, phylogenetically related species were chosen for the construction of the phylogenetic tree, inclusive of 27 Arthroderma spp.; 1 Ctenomyces sp.; and 16 species belonging to the anamorphic genera Trichophyton, Microsporum, Epidermophyton, and Chrysosporium.
(iv) Alignment and tree construction. Alignment was performed by using CLUSTAL V (DKFZ, Heidelberg, Germany), and tree construction was performed by using PAUP 4.0b10 (38). Parsimony and neighbor-joining analyses were conducted with unambiguously aligned sequences by using the heuristic search option and the Kimura two-parameter model, respectively. The robustness of the branches was assessed by bootstrap analysis with 1,000 replicates.
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FIG. 1. Fourteen-day-old colony of T. eboreum on Sabouraud agar at 26°C.
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FIG. 2. Clavate microconidia.
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FIG. 3. Conidia of various lengths.
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FIG. 4. Club-shaped macroconidium.
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FIG. 5. Hook-shaped short hyphae.
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FIG. 6. Cleistothecium-like structure on the culture surface.
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FIG. 7. Spiral hypha.
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FIG. 8. Positive hair perforation.
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The API-ZYM test detected the following enzymes: with cultures in Sabouraud broth, clearly positive proof of esterase (C4), esterase lipase (C8), leucine arylamidase, phosphatase acid, ß-glucosidase, N-acetyl-ß-glucosaminidase, and
-mannosidase; with cultures in neopeptone broth, clearly positive proof of phosphatase alkaline, leucine arylamidase, and ß-glucosidase; with cultures on hair, clearly positive proof of phosphatase alkaline, esterase (C4), esterase lipase (C8), lipase (C14), leucine arylamidase, valine arylamidase, cystine arylamidase, phosphatase acid, naphthol-AS-BI-phosphohydrolase, ß-glucosidase, N-acetyl-ß-glucosaminidase, and
-mannosidase; and with cultures on stratum corneum, clearly positive proof of phosphatase alkaline, phosphatase acid, naphtol-AS-BI-phosphohydrolase, and ß-glucosidase.
Distinctive moldy or mossy odors were perceptible even from closed but unsealed petri dishes after 2 weeks of growth.
Molecular data. The ITS1, ITS2, and 5.8S rRNA sequences of our isolate were compared with the sequences of up-to-date validly described dermatophyte species of the genus Arthroderma, of which the anamorphs belong to the genera Trichophyton, Epidermophyton, Chrysosporium, and Microsporum (Table 1, Fig. 9, and Fig. 10) (10). Before the tree was calculated, a BLASTn search determined that the nearest neighbor of the isolated strain was Chrysosporium vespertilium (94% similarity) (39). As shown in Fig. 9, clustering of the new isolate amid the geophilic group of Trichophyton and Chrysosporium species is supported by a high bootstrap value of 98%. The nearest teleomorph species were Arthroderma flavescens and Arthroderma multifidum.
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FIG. 9. Bootstrap consensus tree obtained for ITS sequences (759 characters) of 19 geophilic species genetically closely related to T. eboreum. The tree was generated by using the neighbor-joining method and the Kimura two-parameter model of PAUP (version 4.0b10). Bootstrap values above 50% are shown. Keratinomyces ceretanicus was used as the outgroup. The EMBL accession numbers for the sequences are listed in Table 1.
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FIG. 10. Parsimony consensus tree (of 18 equally parsimonious trees) obtained for ITS sequences of 45 dermatophyte species. The distant relatedness between T. eboreum and the human-associated dermatophyte species is obvious (cluster 1 versus cluster 2). The tree was generated by using the heuristic search option of PAUP (version 4.0b10). Of the 759 characters, 305 were excluded due to ambiguities in the alignment. Of the characters included, 153 were parsimony informative. The tree was 837 steps. Bootstrap values above 50% are shown. Keratinomyces ceretanicus was used as the outgroup. The EMBL accession numbers for the sequences are listed in Table 1.
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On Sabouraud agar, the colony of our isolate was macroscopically typical for cultures of dermatophytes, and microscopically, many macroconidia that showed all the characteristics of Trichophyton macroconidia (smooth and thin walled, club shaped, multicellular) were seen. Therefore, our strain was identified as a dermatophyte of the genus Trichophyton (2, 12, 26, 32, 37, 40).
Further characterization of this strain revealed some similarities with T. mentagrophytes and T. terrestre. Similar to both of these species, it had a flat and granular colony with no distinct surface pigmentation. Like T. mentagrophytes, it produced many macroconidia and spiral hyphae and was positive for hair perforation and urease activity. Similar to T. terrestre, it developed conidia of various lengths with two or more cells and had no marked pigmentation of its reverse side. However, in contrast to T. mentagrophytes, our strain lacked pigmentation and the shape and arrangement of its conidia resembled those of Trichophyton rubrum conidia rather than those of T. mentagrophytes conidia. In addition, it developed peculiar hook-shaped hyphae and cleistothecium-like mycelial structures on its surface as distinguishing features. Similar characteristics are known as "pseudogymnothecia" and are found among some heterothallic members of the geophilic clade (10, 34). The physiological properties of our isolate are consistent with dermatophytes (6, 8, 13, 36), but we could not identify a singular feature as a hallmark of Trichophyton eboreum.
The molecular analysis of the ITS region clearly supports the grouping of the isolated strain amid the geophilic Arthroderma species (bootstrap support, 98%). By ITS sequence analysis, the distance to the next asexual species, C. vespertilium, is 6%; and the distance to the next sexual species, e.g., A. flavescens, is even larger. The low similarity (94%) clearly separates the new species from any Arthroderma species known to date. By comparison of ITS sequence similarities among dermatophytes, nearly all of the species in Arthroderma, which are biological species, are less than 98% related. This implies that the whole group of species stems from the same adaptive radiation event in the past. Exceptions are the gross of asexual species that are anthropophilic or zoophilic and two geophilic Microsporum species, Microsporum ripariae and Microsporum gallinae, which are 98% and 100% similar to their next relatives, Arthroderma fulvum and Arthroderma grubyi, respectively (16, 18, 28, 29). The relatedness in some of the morphological features between T. eboreum and T. mentagrophytes or T. rubrum is clearly not supported by the molecular analysis (Fig. 10). Taken together, the data presented unequivocally indicate that our isolate belongs to a hitherto unknown anamorphic species in the Arthroderma clade. There is reason to assume that it is a geophilic species, although its ecological niche remains unknown.
The clinical picture in our patient was a characteristic chronic moccasin-type tinea pedis. This type of aphlegmasic tinea is typically caused by anthropophilic but not geophilic dermatophytes. It is quite possible, therefore, that in our case T. eboreum was a contaminant with no causal relation to the skin lesions and that we missed the true causative agent. On the other hand, it cannot be excluded that due to the immunosuppression of the patient, a usually nonpathogenic species had caused a commensal superficial colonization. The good in vitro growth of T. eboreum on human stratum corneum and on human hair clearly demonstrates that this species has the capability to utilize human keratins for its nutrition.
Since T. eboreum had not been detected previously either as a contaminant or as a pathogen in medical microbiological laboratories, it must be a very rare species, at least in countries in which cultures of dermatophytes are done routinely. It is possibly a strictly geophilic species and/or a species with an extraordinarily limited geographic distribution. With our report we want to draw attention to this species. It is hoped that a raised awareness will lead to more observations in the future that will help to clarify the distribution and pathogenic potential of T. eboreum. Our strain is deposited in the Deutsche Sammlung von Mikroorganismen und Zellkulturen and at the Centraalbureau voor Schimmelcultures, Utrecht, The Netherlands (strains DSMZ 16978 and CBS 117155, respectively). The Latin word "eboreum" in its name means "ivory" and is reminiscent of the origin of its carrier and the whitish color of its colony.
Descriptio Trichophytonis eborei Brasch et Gräser sp. nov. In agaro Sabouraud (2% glucose) ad 26°C: colonia per 14 dies crescit ad diametrum 50 ac 60 mm; plane se extendentis thalli superficies granea vel leviter pulverulenta, margo radiatus et pennatus, obversa et aversa pars albida. Nullum pigmentum exsudatum vel se diffundens. Microconidia in speciem clavae formata, circa 2.5 µm lata et 4 ac 5 µm longa, lateraliter hyphis sublata. Copiosa macroconidia in speciem clavae formata ex 9 vel paucioribus cellulis composita, cylindrata vel in speciem clavae formata, cum rotundatis non adhaerentibus apicibus, tenuibus ac mollibus parietibus et tenuibus saeptis, circa 4 µm lata et usque ad 50 µm longa brevibus subtentis ramis sublata. Hyphae in speciem hami curvatae, cum terminis obtusis atque crassatis, lateribus hypharum indifferentium sublatae. Conspicui myceliales globi cleistotheciaformes dense internexi in superficie vetustiorum culturarum cum eminentibus brevibus hyphis manipuliformibus tenuitunicatis in speciem hami curvatis. Multae spirales hyphae et nonnullae chlamydospores in vetustioribus culturis.
In aliis usitatis mycologicis culturis similiter crescit ac in agaro Sabouraud. Non crescit ad 37°C, non inhibetur per 400 mg liter1 cycloheximidem vel 5% NaCl. In agaro bromocresol lacte purpureo solidi-glucose levis alcalinitas per 10 dies; agarum non translucent ultra marginem coloniae, nullum pigmentum apparet, incrementum non inhibetur. Nullum pigmentum apparet in patata-dextrose agaro. Bene crescit in humano strato corneo et in humano capillo; experimentum perforationis capillaris positivum. Leviter positiva urease-reactio in Christensen uretico agaro per 7 dies. Vitaminis opus non est. Resistit contra fluconazole usque ad 256 µg ml1 (Etest). Ampla varietas effusorum encymorum in cultura capillari.
Si cum notis dermatophytibus et cum specie Chrysosporium comparare velis, simillimum est 94% ac Chrysosporium verpertilium, ut apparet ex integra analysi sequentiarum spatiorum 1 ac 2 internorum transcriptorum et spatii intermedii 5.8S ribosomalis RNA. Proxima teleomorph species: A. flavescens et A. multifidum.
Teleomorph ignotum. Conservatur in Collectione Germana Microorganismorum et Culturarum Cellularum (DSMZ 16978) et in Administratione Centrali Culturarum Mucescentium in Hollandia (CBS 117155).
Holotypus. Holotypus segregata est in Departemento Dermatologiae Universitatis Slesvico-Holsaticae, in Campo Chiloniensi in urbe Chiloniensium (Germania) ex tinea pedis generis moccasinensis viri adulti ex urbe Abidjan (Litus Ebureum); identitas a J. Brasch et Y. Gräser mense Decembri anni 2004 cognita est. In herbario Instituti Botanici Universitatis Slesvico-Holsaticae, in Campo Chiloniensi in urbe Chiloniensium (Germania) praeservatus (KIEL MuscArth200501).
Cultures of strains were provided by the Centraalbureau voor Schimmelcultures.
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