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Journal of Clinical Microbiology, April 2005, p. 2009-2011, Vol. 43, No. 4
0095-1137/05/$08.00+0 doi:10.1128/JCM.43.4.2009-2011.2005
Copyright © 2005, American Society for Microbiology. All Rights Reserved.
| CASE REPORT |
Institute of Hygiene, Medical University Graz, Graz,1 Institute of Hygiene and Social Medicine,2 Department of Pediatrics,3 Department of Radiology, Innsbruck Medical University, Innsbruck, Austria4
Received 3 June 2004/ Returned for modification 4 August 2004/ Accepted 29 November 2004
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FIG. 1. CT scan of the lung showing intrapulmonary nodule (arrow).
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Laboratory studies. To identify the clinical isolate, the internal transcribed spacer (ITS) region of the rRNA genes was investigated. Total DNA was extracted using the commercial kit DNeasy Plant Mini Kit (Qiagen, Venlo, The Netherlands) following the manufacturer's instructions. PCR was carried out with the panfungal primer pair ITS1f (5) and ITS4 (10) as described recently (2). The resulting amplicons of 636 bp were sequenced using the ABI PRISM BigDye Terminator Cycle sequencing kit (Applied Biosystems, Foster City, Calif.).
GenBank search with the aid of Fasta 33 (http://www2.ebi.ac.uk/fasta3/) showed a homology of 99.5% (three-base difference) with the sequence AB079265, which was an environmental isolate (from Japan) of Irpex lacteus Fries, also known as Polyporus tulipiferae Schwein.
To confirm this result, other specimens of trustworthy identity were examined (Table 1). DNA was extracted from three desiccated basidiocarps of the herbarium at the Institute of Botany, Karl-Franzens University, Graz, Austria. These herbarium samples were between 12 and 38 years old; two of them originated from Germany and one was from Canada. Another specimen was collected from the same region where the patient lives (Tyrol, Austria) and was obtained from the herbarium of the Leopold-Franzens University, Innsbruck, Austria. One strain (DSMZ 1183 = CBS 431.48) from the German Collection of Microorganisms and Cell Cultures (DSMZ) was examined as well. This strain was isolated in 1948 from an oak (Quercus sp.) in Canada. Alignment of all sequence data of the rRNA gene ITS region revealed analogies between 99.5% (clinical isolate) and 100%.
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TABLE 1. Investigated specimens of Irpex lacteus
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FIG. 2. Mating experiment with clinical (black arrows) and reference (white arrows) strains of Irpex lacteus.
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Conclusions. Homobasidiomycetes occur rarely in mycotic diseases. Recently, a higher prevalence of Schizophyllum commune (Aphyllophorales, bracket fungi) in fungus balls of nasal sinuses and in patients suffering from chronic rhinosinusitis has been reported (2, 3). Another basidiomycete repeatedly reported in humans is Hormographiella aspergillata, the anamorph of the Agaricales mushroom Coprinus cinereus (9). To our knowledge, this is the first time that Irpex lacteus Fries (Hymenomycetes, Stereales) is reported to be involved in a human mycosis. This bracket mushroom is known as the milkwhite toothed polypore mushroom, one of the causal organisms of white rot in wood, and it is distributed worldwide, although its main occurrence is in the boreal region of the northern hemisphere. To our knowledge transmission from the environment to humans is unknown.
To date, there is no treatment regimen for infections due to I. lacteus. In our case, infection did not respond to systemic voriconazole, as fever did not subside. Administration of amphotericin B appears to be the most effective agent. However, no detailed information is available for I. lacteus because of the lack of applicable susceptibility tests. Therapy with new antifungal agents should be administered only to patients with identified fungal pathogens, as these agents lack effectiveness against Mucor and Rhizopus species.
Fungi which fail to produce unambiguous morphological features for reliable "classical" identification, as described above for this isolate (white aerial mycelium consisting of septate branching hyphae without conidia, chlamydospores, or clamp connections), have always been encountered in routine clinical work. This could be occurring more frequently because of growing numbers of mycotic diseases. Diagnosis of such isolates by comparing the sequences of the rRNA gene ITS region and other targets with entries in GenBank is a fast method and therefore increasingly used. Nevertheless, since entries in gene banks are not checked for reliability and accuracy, up to 20% of these data are incorrect (1, 4). Therefore, results obtained in this way should always be reviewed carefully. The identification of our clinical isolate was confirmed by sequencing specimens from international culture collections as well as from basidiocarps obtained from public herbarium collections. Despite the fact that the specimens compared originated from different regions of the world (Austria, Germany, Japan, and Canada) and were up to 38 years old, the sequence data differed only between 0% and 0.5% (3 bp). One of these differences in ITS1 was common to the clinical strain and a 32-year-old fruiting body from Germany (T:C); the other two changes concerned the clinical strain only and were found in ITS2 (T:C and C:T).
There was no visible difference between the case isolate and the DSMZ strain concerning cultural and hyphal features. Thermotolerance seems to be more advanced in the case isolate. It grew easily at 37°C, whereas the maximum growth temperature for the DSMZ strain was 30°C. Mating experiments with two strains of I. lacteus did not lead to the formation of basidiocarps or clamp connections. However, I. lacteus never forms the latter even in dikaryotic mycelium, as discussed by Jülich in 1984 (6).
It can be assumed that isolates obtained from clinical samples with white, cottony, rapidly growing cultures and which fail to produce distinct microscopic features for identification might represent filamentous basidiomycetes; those fungi deserve to be examined in more detail as we learn about their role as human pathogens and their occurrence in mycotic diseases.
Nucleotide sequence accession number. The sequence data were submitted to the National Center for Biotechnology Information and were registered with accession numbers AY569561 through AY569566 (Table 1).
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