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Journal of Clinical Microbiology, May 2006, p. 1836-1838, Vol. 44, No. 5
0095-1137/06/$08.00+0 doi:10.1128/JCM.44.5.1836-1838.2006
Copyright © 2006, American Society for Microbiology. All Rights Reserved.
Department of Clinical Laboratory Sciences and Medical Biotechnology,1 Center for Optoelectronic Biomedicine, National Taiwan University College of Medicine,2 Department of Laboratory Medicine,3 Division of Neurosurgery, Department of Surgery, National Taiwan University Hospital, Taipei, Taiwan4
Received 6 January 2006/ Accepted 14 February 2006
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Identification of the above-mentioned bacteria in the clinical laboratory setting usually depends on morphological observation and biochemical tests and serogrouping. Many laboratories report the identification of these bacteria to the group level but not the species level. However, differentiation to the precise species among these GCS and GGS should not be ignored, because it has been reported that large-colony GCS or GGS (referring to S. dysgalactiae subsp. equisimilis) may have virulence factors similar to those of Streptococcus pyogenes (9, 13) and are more invasive than the anginosus group among GCS or GGS (4).
Conventional methods of differentiation based on morphology and biochemical reactions were time-consuming, and the results were usually unsatisfactory (5). Molecular methods targeting the 16S rRNA gene, the 16S-23S rRNA intergenic spacer, or the groEL gene have recently been used as more accurate methods to identify species of the anginosus group or S. dysgalactiae subgroups (1, 2, 8, 16, 17). However, these methods usually need sequence determination and were not economical for clinical use.
We have previously determined the groESL sequences in viridans group streptococci (14). The groES and groEL genes (also known as cpn10/60) are evolutionarily conserved and are considered as an alternative for the identification of microorganisms. To differentiate the anginosus group from other viridans group streptococci, we designed a set of PCR primers specific for members of the anginosus group. In this study, we unexpectedly found that beta-hemolytic S. dysgalactiae subsp. equisimilis also generated a smaller, nonspecific PCR product.
Bacterial strains. The bacterial strains used in this study consisted of the following reference strains obtained from the American Type Culture Collection (ATCC) (Rockville, Md.) and 40 clinical isolates (23 GCS and 17 GGS) that were collected from the Bacteriology Laboratory, National Taiwan University Hospital, a 2,000-bed teaching hospital in northern Taiwan. The ATCC reference strains included S. pyogenes ATCC 19615, S. agalactiae ATCC 13813, S. anginosus ATCC 33397, S. constellatus ATCC 27823, S. intermedius ATCC 27335, S. sanguis ATCC 10556, S. gordonii ATCC 10558, S. bovis ATCC 43144, S. oralis ATCC 35037, S. mitis ATCC 49456, S. pneumoniae ATCC 49619, and S. dysgalactiae subspecies equisimilis ATCC 12388, ATCC 12394, and ATCC 35666.
Conventional identification.
Colony size, hemolytic reaction, Voges-Proskauer (VP) reaction, and ß-glucuronidase (ß-GUR) activity were tested for 40 clinical isolates that were initially identified as Lancefield group C or G streptococci by an agglutination kit (Streptex; Murex Biotech Ltd., Dartford, United Kingdom). The colony size of each isolate was observed after 24 h of incubation at 37°C in 5% CO2 on a 5% sheep blood agar plate and was recorded as small, intermediate, or large. Small colonies were defined as having "sand-like" morphology, with a colony diameter of less than 0.5 mm. Large colonies were defined as having a diameter of
1.0 mm, and intermediate-sized colonies were defined as having a diameter between 0.6 and 0.9 mm. Two distinct types of hemolysis were observed, vague (Fig. 1A) and clear (Fig. 1B).
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FIG. 1. Colony morphologies of GCS and GGS. (A) S. anginosus clinical isolate GCS 927. (B) S. anginosus clinical isolate GCS 1577. (C) S. anginosus ATCC 33397. A, B, and C showed different colony sizes and hemolytic characteristics. (D) S. dysgalactiae subsp. equisimilis ATCC 12388. (E) S. dysgalactiae subsp. equisimilis clinical isolate GGS 4115. The colony sizes of E were larger than that of the corresponding reference strain (D). Colony sizes of B and D were similar. The line is a scale that represents 10 mm.
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Three types of colony morphologies were found among the 17 GGS clinical isolates. Three isolates formed small, vaguely hemolytic colonies (two VP-positive isolates and one VP-negative isolate). Three isolates had intermediate, clearly hemolytic colonies (one VP-positive and two VP-negative isolates). The six isolates described above were identified as S. anginosus by 16S rRNA gene sequencing. The remaining 11 isolates had large, clearly hemolytic colonies that were VP negative and were identified as S. dysgalactiae subsp. equisimilis by 16S rRNA gene sequencing.
The ß-GUR test was performed as described previously by Fox et al. (6). It has been reported that the ß-GUR test may provide better differentiation between S. dysgalactiae subsp. equisimilis and S. anginosis. In the present study, the results from 23 isolates of GCS were in agreement with results reported previously by Fox et al. (6), which showed that all anginosus group isolates displayed negative ß-GUR activity, while S. dysgalactiae subsp. equisimilis had positive reactions. However, in GGS, one exception occurred. One isolate that was identified as S. dysgalactiae subsp. equisimilis by 16S rRNA gene sequencing displayed negative ß-GUR activity. A similar result was reported previously by Lawrence et al. (12). The negative ß-GUR activity may lead to misidentification.
Anginosus group-specific PCR. On the basis of known streptococcal groESL sequences (14), we designed a pair of primers to differentiate members of the anginosus group from other members of viridans group streptococci. The primers are milleri-EL-F (5'-ACTCTTGTGTTAAATAAAATCC-3'), corresponding to nucleotide positions 775 to 796, and milleri-EL-2R (5'-ACGCAGCATTTTGAAGRGCA-3') (where R = A + G), corresponding to nucleotide positions 1516 to 1497 of the groEL gene. PCR was performed for 30 cycles, with each cycle consisting of 1 min at 94°C, 30 s at 53°C, and 1 min at 72°C, followed by a final extension step at 72°C for 7 min. PCR products were subjected to 1.5% agarose gel electrophoresis, stained with ethidium bromide, and photographed under UV light.
The PCR was found to be specific to the anginosus group, with the exception of S. dysgalactiae subsp. equisimilis. The isolates that were identified as belonging to the anginosus group (including S. anginosus and S. constellatus) by 16S rRNA gene sequencing always produced the 742-bp products. S. dysgalactiae subsp. equisimilis isolates can also generate the 361-bp nonspecific products (Fig. 2). The sequence of this nonspecific 361-bp amplicon was determined and compared to published sequences in the GenBank database by using BlastN algorithm. The closest match was obtained with the DNA gyrase subunit b of S. pyogenes MGAS315, section 11 of 37 of the complete genome (GenBank accession number AE014146) (88% nucleotide sequence identity and 99.8% amino acid identity).
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FIG. 2. Gel electrophoresis of anginosus group-specific PCR products from group C and group G streptococcal clinical isolates. Lane M, molecular size marker (100-bp ladder; Gibco BRL, Gaithersburg, Md.); lanes 1 to 3, group C streptococcus S. constellatus; lanes 4 to 6, group C streptococcus S. anginosus; lanes 7 and 8, group C streptococcus S. dysgalactiae subsp. equisimilis; lanes 9 to 11, group G streptococcus S. dysgalactiae subsp. equisimilis; lanes 12 to 15, group G streptococcus S. anginosus; lane C, negative control (no DNA). All S. anginosus and S. constellatus isolates generated 742-bp products. All S. dysgalactiae subsp. equisimilis isolates (lanes 7 to 11) generated 361-bp products.
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FIG. 3. RFLP of PCR-amplified 742-bp products. (A) XbaI digestion. (B) BsmI digestion. Lane M, molecular size marker (100-bp ladder; Gibco BRL, Gaithersburg, Md.); lane 1, S. constellatus ATCC 27823; lanes 2 to 5, S. constellatus clinical isolates; lane 6, S. anginosus ATCC 33397; lanes 7 to 10, S. anginosus clinical isolates.
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In conclusion, the anginosus group-specific PCR provided rapid and reliable differentiation among members of the anginosus group, S. dysgalactiae subsp. equisimilis, and S. pyogenes. PCR amplification coupled with RFLP allowed further differentiation between S. anginosus and S. constellatus. This PCR test provides an alternative identification method for use in clinical laboratories.
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