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Journal of Clinical Microbiology, August 2006, p. 2743-2749, Vol. 44, No. 8
0095-1137/06/$08.00+0 doi:10.1128/JCM.00601-06
Copyright © 2006, American Society for Microbiology. All Rights Reserved.
National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Manitoba, Canada,1 Laboratoire de Santé Publique du Québec, Institut national de santé publique du Québec, Sainte-Anne-de-Bellevue, Québec, Canada,2 Agence de la santé et des services sociaux de Chaudière-Appalaches, Québec, Canada,3 Walter Reed Army Institute of Research, Washington, D.C.,4 Department of Social and Preventive Medicine, Laval University, and Institut National de Santé Publique du Québec, Québec City, Québec, Canada5
Received 21 March 2006/ Returned for modification 11 April 2006/ Accepted 31 May 2006
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A major recent change in the epidemiology of IMD in Canada is the introduction of the new serogroup C clone of ET-15 Neisseria meningitidis (C:2a:P1.5,2) strains, which caused two waves of increased disease incidence throughout Canada in the last 15 years (2, 31). The first wave of disease caused by this C:2a:P1.5,2 ET-15 clone occurred in the early 1990s. As a response to the outbreaks caused by this new clone, targeted vaccination campaigns using the polysaccharide vaccines were carried out in several provinces (Ontario, Québec, Prince Edward Island, and British Columbia) (8, 13, 28, 29). In the province of Québec, a province-wide vaccination campaign was launched between December 1992 and March 1993 after initial vaccination of the target population did not curtail the spread of this clone in that province (8). These vaccination campaigns had been very successful in reducing the amount of serogroup C meningococcal disease activity in Canada from 1994 to 1999 (7, 26). The effectiveness and cost/benefit ratio of the province-wide immunization against serogroup C meningococci in Québec have been analyzed and reported (8, 9).
In 2000 and 2001, several provinces (British Columbia, Alberta, Manitoba, Ontario, and Québec) noted a resurgence in meningococcal disease activity due to serogroup C N. meningitidis. In Québec, the outbreak was due to a unique antigenic variant of the serogroup C ET-15 clone (32). To combat the spread of disease due to this second wave of IMD, the province of Québec initially launched local immunization programs using the plain polysaccharide vaccine to target high school students in the Québec City area where the initial outbreaks occurred. However, when the outbreak spread to other regions and also affected younger age groups, the province decided to launch another mass immunization campaign, and this time the newly licensed serogroup C glycoconjugated vaccine (Menjugate; Chiron, Emeryville, California) was used. Starting in May to June 2001, the conjugate vaccine was offered to all residents age 2 months to 20 years, initially in the Québec City area, and beginning in the summer of 2001, the immunization was extended to the same age group of residents in other regions of the province (10). The effectiveness of this glycoconjugate vaccine was reported to be 96.8% in reducing the number of cases of serogroup C meningococcal disease in Québec (10).
In Québec, IMD is a notifiable disease. Clinical and laboratory-confirmed cases are registered in a provincial notifiable disease database. Clinical isolates and culture-negative clinical specimens (for PCR diagnosis) must be submitted to the Laboratoire de Santé Publique du Québec (LSPQ) for further analysis and characterization. Between October 2004 and March 2005, local public health officials together with the LSPQ of the Institut Nationale de Santé Publique du Québec noticed a cluster of six IMD cases due to serogroup B meningococci in region 12 (Chaudière-Appalaches) and one documented contact case in adjacent region 03 (La Capitale Nationale, Québec City). This cluster of cases included four cases identified by PCR diagnosis (detection of N. meningitidis-specific and serogroup B-specific DNA in normally sterile body fluids of patients), and the others were culture-confirmed cases. The National Microbiology Laboratory (NML) of the Public Health Agency of Canada was contacted to conduct a laboratory investigation of the causative agent in this cluster of IMD cases. This cluster of cases around the Québec City area prompted us to carry out an in-depth investigation, and here we present a report of the laboratory findings, which suggest that an emerging clone of serogroup B meningococci, belonging to sequence type 269 (ST-269), has been causing IMD in the province of Québec since 2003.
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PCR primers and thermal cycling conditions for the amplification of the serogroup-specific polysialyltransferase siaD genes as well as the N. meningitidis-specific ctrA gene were described by Borrow et al. (4, 5, 14). PCR products were confirmed by DNA hybridization using biotin labeled probes and digoxigenin-11-dUTP (Roche Diagnostic, Laval, Québec, Canada) in the PCR amplification step, followed by PCR-enzyme-linked immunosorbent assay (ELISA) as described by Borrow et al. (4, 5).
Identification, serogrouping, and typing of meningococci. N. meningitidis was identified by biochemical tests, and serogrouping was determined by bacterial agglutination with rabbit serogrouping antisera at the LSPQ (19). Serotyping and serosubtyping were done at the NML by whole-cell ELISA (1), using monoclonal antibodies from a commercial kit (Rijksinstituut voor Volksgezondheid en Milieu, National Institute of Public Health, Bilthoven, The Netherlands). Monoclonal antibodies to serotype antigen 17 and serosubtype antigen P1.19 were provided by the Walter Reed Army Institute of Research. For strains that gave either no agglutination or nonspecific agglutination with the serogrouping antisera, detection of the serogroup B-, C-, Y-, and W135-specific siaD genes was carried out by PCR (4, 5). Multilocus sequence typing (MLST) was done according to method described by Maiden et al. (17), and isolates were assigned to STs according to the Neisseria MLST website (http://pubmlst.org/neisseria). Sequencing of porB and porA genes, which determine the serotype and serosubtype antigens, respectively, was done following the protocol and nomenclature of Sacchi et al. (22, 23). The PorA and PorB VR types were described according to the nomenclature of Sacchi (22, 23) as well as the nomenclature given in the N. meningitidis PorA variable-region (VR) database (http://neisseria.org/perl/agdbnet/agdbnet.pl?file = poravr.xml) and the N. meningitidis PorB variable-loop typing scheme (http://neisseria.org/nm/typing/porb/varloops.shtml). Pulsed-field gel electrophoresis (PFGE) of NheI restriction enzyme-digested meningococcal genomic DNA and data analysis of DNA fingerprints, including generation of dendrograms, were done as essentially described by Tyler and Tsang (34), using the Bionumerics software version 3.5 (Applied Maths, Kortrijk, Belgium).
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TABLE 1. Cluster of serogroup B invasive meningococcal disease cases in South Shore of Québec City (region 12, Chaudière-Appalaches) and the adjacent region (region 03, La Capitale Nationale, Québec City), Québec, Canada, October 2004 to March 2005
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For the three bacterial cultures obtained, porB gene sequencing and MLST were performed to gain further knowledge about the nature of the outbreak strain. Results of porB gene sequencing suggested that the three isolates belong to serotype 17 based on the PorB VR types identified (VR1 = B, VR2 = C, VR3 = 7, and VR4 = 14b, according to the nomenclature of Sacchi et al. [22]). The equivalent PorB variable loops according to the nomenclature of the N. meningitidis PorB typing scheme were I.9, V.13, VI.9, and VII.12 (http://neisseria.org/nm/typing/porb/varloops.shtml).
By MLST the three isolates were identified as ST-269, since they all had the following housekeeping gene alleles: abcZ, 4; adk, 10; aroE, 15; fumC, 9; gdh, 8; pdkc, 11; and pgm, 9) (http://pubmlst.org/neisseria).
Based on the porA and porB gene sequencing results, the outbreak strain is identified as serotype 17 with the serosubtype antigens of P1.19,15. The lack of reaction of the outbreak strain with the anti-P1.15 monoclonal antibody may be related to the fact that in the outbreak strain, mutations involving two nucleotides in the VR2 region of its porA gene had resulted in changes in the amino acid composition of its VR2 epitope. Testing of the outbreak strains isolated from the three cases confirmed that they all reacted with the monoclonal antibody to serotype 17 and with the monoclonal antibody to the serosubtype antigen P1.19.
Retrospective analysis of B:NT:P1.- isolates with monoclonal antibodies that identified the serotype 17 and serosubtype P1.19 epitopes. Retrospective analysis of our records at NML revealed that the percentage of IMD isolates received from the province of Québec that typed as serogroup B in the last 4 years increased from 29% in 2001 to 46%, 58%, and 65% in 2002, 2003, and 2004, respectively. At the same time, the number and percentage of serogroup B IMD isolates that were typed as B:NT:P1.- rose from 3 or 4 isolates, or 13%, in both 2001 and 2002 to 10 isolates, or 37%, in 2003 and 20 isolates, or 53%, in 2004. In the first half of 2005, there were already 12 B:NT:P1.- isolates among the 21 serogroup B IMD isolates received from the province of Québec.
Prior to this study, monoclonal antibodies to the serotype antigen 17 and the serosubtype antigen P1.19 had not been used to characterize meningococcal strains in Canada, partly because these reagents were not commercially available. Table 2 lists the B:NT:P1.- isolates recovered from IMD cases in Québec from 2001 to the first half of 2005 and their typing results with the anti-serotype 17 and anti-serosubtype P1.19 monoclonal antibodies. All 12 B:NT:P1.- isolates from IMD cases in 2005 were typed as B:17:P1.19. Seventeen (85%) out of 20 and 9 (90%) out of 10 B:NT:P1.- IMD isolates from 2004 and 2003, respectively, were typed as B:17:P1.19. None of the B:NT:P1.- isolates from 2002 (four cases) and 2001 (three cases) belonged to the B:17:P1.19 strain. One isolate from 2002 (isolate 2002-191) reacted with the monoclonal antibody to serotype 17 but did not react with the monoclonal antibody to serosubtype P1.19. This isolate was found to belong to ST-269.
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TABLE 2. Identification of the B:17:P1.19 clone from B:NT:P1.- Neisseria meningitidis invasive infection cases confirmed by culture in the province of Québec, Canada, January 2001 to June 2005
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Forty-eight B:NT:P1.- isolates, including 37 isolates typed as B:17:P1.19, were analyzed by PFGE, and the results are presented in Fig. 1. Those isolates typed as B:17:P1.19 have either identical or highly similar (90% or higher relatedness) DNA fingerprints, while those strains that showed no reaction to the serotype 17 and serosubtype P1.19 monoclonal antibodies show different PFGE patterns (60% or less relatedness).
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FIG. 1. Pulsed-field gel electrophoresis profiles of NheI-digested DNAs from the B:17:P1.19 and B:NT:P1.- strains. Strains 2004-200 and 2004-237 were isolates from index cases of the outbreak in region 12 of Québec. Strain 2002-191 (B:17:P1.-) belongs to ST-269.
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TABLE 3. Number and percentage of cases of invasive B:17:P1.19 Neisseria meningitidis disease by age group and sex in the province of Québec, Canada, March 2003 to June 2005
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FIG. 2. Pulsed-field gel electrophoresis patterns of B:17:P1.19 and C:17:P1.19 strains. Lanes 1 and 6, molecular weight makers provided by Salmonella enterica serovar Barenderup digested with NheI. Lanes 5 and 7, B:17:P1.19 ST-269 isolates. Lane 2, isolate 2004-114 (C:17:P1.19, ST-269), Lane 3, isolate 2003-195 (C:17:P1.19, ST-269). Lane 4, isolate 2003-138 (C:17:P1.19, ST-1095/ST-269 clonal complex).
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Serogroup B clones that have been described in the literature as causing epidemic disease include ET-5 (ST-32 complex), cluster A4 (ST-8 complex), and lineage III (ST-41/44 clonal complex) (6). Although sporadic cases due to these three well-characterized serogroup B clones have been found in Canada, they do not appear to share any properties (housekeeping enzyme alleles or serotype/serosubtype antigens) with the ST-269 clone identified in this report. Also, no outbreaks due to these clones have been reported in Canada, with the exception of a spatio-temporal cluster of five IMD cases due to ET-5 serogroup B meningococci that occurred in 1995 on the Island of Montréal (16). The occurrence of this cluster of cases coincided with the increase in the proportion of IMD due to serogroup B in the province of Québec, and this is possibly related to the mass immunization campaign with the tetravalent (A, C, Y, and W135) or bivalent (A and C) vaccines used in 1993 for controlling the spread of the ET-15 serogroup C meningococci in that province (16). Whether the current increase in the finding of the B:17:P1.19 ST-269 clone was also related to the province-wide vaccination campaign in 2001 to 2002 cannot be answered for sure. Nevertheless, it is interesting to note that no B:17:P1.19 ST-269 meningococcal strain was identified in Québec prior to 2003 (the massive use of the conjugated serogroup C meningococcal vaccine occurred in 2001).
Although ST-269 and the ST-269 clonal complex are not a well-known emerging clone, a substantial number of isolates that belong to the ST-269 clonal complex existed in the Neisseria meningitidis MLST database (http://pubmlst.org/neisseria). When accessed on 6 December 2005, this database showed that there were altogether 236 records describing strains belonging to the ST-269 clonal complex. A high degree of heterogeneity within this clonal complex was also observed, with over 200 different unique STs. Sixty-four percent of the isolates in the ST-269 clonal complex belong to serogroup B, 7% belong to serogroup C, and the rest are mostly either nongroupable or have serogroup information listed as unspecified. Slightly fewer than half of the isolates were recovered from carriers, and an equal number were from invasive disease cases, while the remaining small numbers were from unspecified sources. The earliest record of isolates belonging to the ST-269 clonal complex is from two invasive disease cases in The Netherlands in 1970, and both strains belonged to serogroup B. Also interesting is the recent report of an increase in the ST-269 clone among invasive disease isolates of N. meningitidis in Scotland, which may be related to the introduction of the meningococcal serogroup C polysaccharide conjugate vaccine in the United Kingdom in 2000 (11).
In contrast to what has been described for endemic serogroup B meningococcal disease, which has the highest incidence in the age group of under 2 in Canada (12, 18), IMD cases due to the current B:17:P1.19 strain affected mainly adolescents and young adults between the ages of 10 and 30 (25 out of 38 cases, or 65.8%). In more than half of the cases (22 cases, or 57.9%), the B:17:P1.19 isolates were obtained from CSF cultures, and in 16 cases (42.1%), the bacteria were isolated from blood cultures. Further clinical and epidemiological information on IMD cases caused by this emerging clone of serogroup B meningococci is pending and will subsequently be published.
Concurrent with the findings of an increase in the number of isolates belonging to the B:17:P1.19 ST-269 clone in Québec was the appearance of three serogroup C isolates (two isolated in 2003 and one in 2004) that were originally typed as C:NT:P1.- but were subsequently found to be C:17:P1.19. Two of these three isolates belong to ST-269, and the third isolate belongs to ST-1059, which is a member of the ST-269 complex. Although it is very difficult to know for sure whether the B:17:P1.19 changed into C:17:P1.19 or vice versa, the following evidence suggests that the capsule switch took place from serogroup B to serogroup C. First, most serogroup C isolates from IMD cases in Canada belong to the ET-15 clonal type (15), and serogroup C ST-269 isolates with the antigenic formula C:17:P1.19 had never been isolated before. Second, the C:17:P1.19 isolates were found in the later half of the year 2003, when B:17:P1.19 isolates were becoming common. The hypothesis that these C:17:P1.19 isolates arose by capsule switching from the B:17:P1.19 strain and the mechanism involved warrant further studies. Capsule switching from C:2a:P1.5,2 to B:2a:P1.5,2, as well as from C:2a:P1.7,1 to B:2a:P1.7,2 and from Y:2c:P1.5 to B:2c:P1.5, has been previously reported in Canada (33, 34; NML, unpublished data).
With the success in the control of serogroup C meningococci by using the conjugated serogroup C vaccine in Québec, it is important to examine whether mass vaccination against a single serogroup of meningococci would contribute to the emergence of a non-vaccine-preventable serogroup of meningococci, such as the potentially hypervirulent clone of ST-269 (B:17:P1.19). The only way to know is through enhanced surveillance of IMD by using both phenotypic and genotypic tools such as those described in this report.
R. S. W. Tsang personally thanks Health Canada's Biotechnology Bacterial Genomics Fund for financial support.
This study made use of the Neisseria multilocus sequence typing website (http://pubmlst.org/neisseria/) developed by Keith Jolly and Man-Suen Chan and sited at the University of Oxford. The development of this site has been funded by the Wellcome Trust and European Union. Some of the MLST data have been submitted to this website.
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