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Journal of Clinical Microbiology, September 2006, p. 3074-3077, Vol. 44, No. 9
0095-1137/06/$08.00+0 doi:10.1128/JCM.00617-06
Copyright © 2006, American Society for Microbiology. All Rights Reserved.
Karen Post,3 and
Nancy A. Cornick1*
Iowa State University, Department of Veterinary Microbiology, Ames, Iowa 50011,1 National Animal Disease Center, Ames, Iowa 50011,2 Rollins Animal Disease Diagnostic Laboratory, North Carolina Department of Agriculture and Consumer Services, Raleigh, North Carolina 276073
Received 22 March 2006/ Returned for modification 14 May 2006/ Accepted 11 June 2006
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Since the mid-1990s, there have been several reports of large outbreaks of severe edema disease in the Midwest and North Carolina. Many of the E. coli strains recovered from these farms had identical virotypes (f18 sta stb stx2) and belonged to serogroup O147. This is not a serogroup of E. coli that is commonly associated with edema disease in the United States, although it has been described in Europe (12). In the United States, serogroup O147 E. coli strains are usually isolated from piglets with postweaning diarrhea and are considered an enterotoxigenic pathotype of E. coli (ETEC). Such strains typically produce F18 or F4 fimbriae and heat-stable and/or heat-labile enterotoxins, but not Stx2e (6). Postweaning diarrhea affects pigs in the same age group as those affected by edema disease. The reported high severity of the clinical symptoms in the edema disease outbreaks, the unusual serogroup (O147), and the identical virotypes of these isolates from several surrounding states (Iowa, Minnesota, Nebraska, and Oklahoma) suggested that the strains may be clonal.
The purpose of this study was to determine if the serogroup O147 edema disease isolates (i) were closely related to one another and (ii) could have evolved from ETEC strains belonging to the same serogroup by acquiring the stx2e gene. In addition, we determined the prevalence of the O147 serogroup among edema disease-causing isolates in Iowa in recent years.
(Preliminary reports of this work were presented at the 104th General Meeting of the American Society for Microbiology, 2004, and the Conference on Gastrointestinal Function, Chicago, IL, 2003.)
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To determine the prevalence of serogroup O147 among recent edema disease isolates, 55 strains of E. coli recovered from edema disease outbreaks between 1996 and 2000 were obtained from the Iowa State University (ISU) Veterinary Diagnostic Laboratory (strain set 2). To ensure that only isolates with the potential to cause edema disease were examined, only porcine isolates positive for the stx2 gene were included.
Virulence genes and serogrouping. A multiplex PCR to detect genes for F18 (F107), F41, F4 (K88), F5 (K99), and F6 (987P) fimbriae; heat-stable enterotoxins a and b (STa, STb), heat-labile enterotoxin, and Stx2 was performed on all of the isolates (4). The Stx2 primers also detected the edema disease variant, Stx2e. Strains were serogrouped using standard methods to determine if they belonged to serogroups commonly associated with edema disease (O138, O139, and O141) or to serogroup O147 (3). Typing for the H antigen was performed on representative strains by the E. coli Reference Center at Penn State University.
PFGE. All of the serogroup O147 isolates recovered from outbreaks of edema disease between 1996 and 2001 (strain set 1) were analyzed by pulsed-field gel electrophoresis (PFGE) using standard methods (14). Briefly, the strains were grown overnight in tryptic soy broth, washed, and embedded in agarose plugs. The plugs were treated with lysozyme (1 mg/ml) in a lysis buffer with 10 mM Tris (pH 7.5), 50 mM NaCl, 100 mM EDTA (pH 8.0), 0.2% sodium deoxycholate, and 0.5% (wt/vol) N-lauroylsarcosine for 2 h at 37°C and then with proteinase K (0.5 mg/ml) in a buffer with 0.5 mM EDTA (pH 8.0) and 1% (wt/vol) N-lauroylsarcosine overnight at 55°C. The plugs were washed with 1 mM phenylmethylsulfonyl fluoride and 10 mM Tris-1 mM EDTA buffer (pH 8.0) and then digested with 5 U of XbaI restriction enzyme overnight at 37°C. The DNA was separated using a 1% agarose gel on a CHEF-DR II system (Bio-Rad, Hercules, CA) with the following settings: initial switch time, 2.16 s; final switch time, 54.17 s; run time, 22 h at 150 V.
Multilocus restriction typing. All of the E. coli O147 strains (strain set 1 plus the additional strains isolated prior to 1996) were analyzed using multilocus restriction typing (MLRT) (5). The seven housekeeping genes were selected for analysis based on previous work by Reid et al. (13). Primers were designed using DNAMAN software (Lynnon Corp., Quebec, Canada) and were selected from the published sequence of the E. coli K12 (strain MG1655) genome (Table 1). DNA was isolated from each of the strains, and a 50-µl PCR was performed for each of the seven genes. The PCR mixture included bacterial DNA, 0.015 µM of each primer, 0.2 mM of deoxynucleoside triphosphates (Roche, Switzerland), 3 mM of MgCl, 1x Amplitaq Gold Buffer, and 2.5 U Amplitaq Gold DNA polymerase (Perkin-Elmer, Branchburg, N.J.). After initial incubation at 95°C for 10 min, 40 amplification cycles were run, each including denaturing at 94°C for 30 seconds, annealing at 55°C for 30 seconds, and extension at 72°C for 90 seconds. A final extension was done at 72°C for 10 min, and the samples were held at 4°C until they were analyzed. The gene products were resolved on a 2% agarose gel, and the DNA bands were visualized by staining the gel with ethidium bromide. Gene products (20 µl) were incubated with 5 U of either HpaII or HhaI restriction enzyme (Table 1) in the appropriate buffer at 37°C overnight, and the restriction fragments were separated on a 4% agarose gel. The decision to use a particular restriction enzyme for fragmenting a PCR product was based on the banding pattern predicted for that PCR product by the E. coli K12 sequence. E. coli MG1655 was used as a positive control, and E. coli O157:H7 strain 933 was included as an outlier.
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TABLE 1. E. coli housekeeping genes analyzed by MLRT
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TABLE 2. Virulence genes detected in E. coli O147 stains analyzed by MLRT
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FIG. 1. PFGE banding patterns of E. coli O147 strains from outbreaks of edema disease. The numbers on the right indicate the lane numbers. The letters indicate the states that strains were recovered from; IA, Iowa; MN, Minnesota; NC, North Carolina; NE, Nebraska; OK, Oklahoma. Lanes: 1 and 17, ladder; 2, major banding pattern (outbreak strain; 26/43 isolates); 3 to 9, closely related strains (8/43 isolates); 10 to 13, possibly related strains (6/43 isolates); 14, 15, and 16, unrelated strains. The criteria for relatedness were those determined by Tenover et al. (15).
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FIG. 2. Dendrogram based on MLRT banding patterns. The numbers in parentheses indicate the number of strains in each clade. The scale at the top indicates the percent relatedness between the strains.
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TABLE 3. Serogroups and virulence genes of E. coli strains (strain set 2) recovered from edema disease outbreaks and submitted to the Iowa State University Veterinary Diagnostic Laboratory between 1996 and 2000
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3 band differences (i.e., one or two random genetic events) can be considered closely related (15). Using this criterion, 34 of the recent edema disease isolates would be considered closely related and 6 additional strains would be considered possibly related. These guidelines were designed to be used when isolates are collected over a short period of time to minimize the number of random genetic events that can occur with numerous cycles of replication. Since our strains were collected over a 5-year period, the conservation of the PFGE banding patterns and virulence genes is further evidence that these strains are likely to be closely related. MLRT analysis of E. coli housekeeping genes supported our PFGE data. MLRT is useful to determine more distant relationships between strains than PFGE because conserved housekeeping genes are analyzed (5). Since serogroup O147 is frequently associated with porcine ETEC strains, we wanted to determine if the strains recovered from edema disease outbreaks could have evolved from the F18+ ETEC strains by acquiring the stx2e gene. The majority of the O147 edema disease strains (41/43) clustered together in the dendrogram (Fig. 2, clade D). These included one isolate that was predicted by PFGE analysis to be unrelated to the majority of the edema disease strains. The remaining strains tended to cluster together based on pathotypes represented by F18+ ETEC, F4+ ETEC, and nonpathogens. Although the majority of the edema disease strains were not related to the F18+ ETEC strains, two isolates did cluster within this clade (clade A). These same two strains were predicted by PFGE to be unrelated to the outbreak strain and belong to a different H type than the majority of edema disease strains. The edema disease outbreak strains clustered closer to E. coli strain K12 than to any of the other O147 clades. This suggests that this clone arose from strains more similar to E. coli K12 than to any of the other porcine pathogens analyzed in this study.
Other serogroups of E. coli that typically cause edema disease have been shown to have genetically diverse backgrounds despite identical lipopolysaccharide antigens and conserved virulence genes (9). Among this group of strains (Hungarian and U.S.), serogroup O138 appears to be less genetically diverse than serogroups O139 and O141. As in our study, there was some overlap in the genetic backgrounds of E. coli strains that cause postweaning diarrhea with those that cause edema disease. Serogroup O157 E. coli strains have also been shown to cluster genetically by pathotypes, and porcine F4+ ETEC strains are not related to the O157:H7/H clones associated with human food-borne illness or to the strains recovered from human urinary tract infections (16).
The appearance of the O147 clone of edema disease-causing E. coli in various geographic locations suggests that it may be spreading between farms. We do not know which herds contributed to the spread of these strains to naïve herds. However, under current swine management practices in the United States, pigs are frequently farrowed in one location and moved to other locations to be finished or put into breeding programs. Such movement could easily lead to the spread of a pathogenic edema disease clone, as was described previously in Denmark (1). Our serogrouping results for edema disease isolates submitted to the ISU Diagnostic Laboratory suggest that this O147 clone is widespread among swine production facilities in Iowa and the Midwest.
This work was supported in part by a grant from the Iowa Pork Producers (03-163) and the Merck Co. through the Merck-Merial Summer Scholars program at Iowa State University (A.M.D. and R.S.).
Present address: Veterinary Specialists of Nevada, Reno, NV 89502. ![]()
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