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Journal of Clinical Microbiology, September 2006, p. 3160-3166, Vol. 44, No. 9
0095-1137/06/$08.00+0 doi:10.1128/JCM.00333-06
Copyright © 2006, American Society for Microbiology. All Rights Reserved.
Institute of Neurology, Huashan Hospital, Shanghai Medical College, Fudan University, Shanghai, China 200040,1 School of Community Health Sciences, Faculty of Medicine and Health Sciences, University of Nottingham, Nottingham NG7 2RD, United Kingdom2
Received 15 February 2006/ Returned for modification 26 April 2006/ Accepted 26 June 2006
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Kashyap et al. have demonstrated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis that a protein with a molecular mass of 30 kDa existed in the CSF of patients with TBM (9). This 30-kDa protein was later proved to be a specific antigen of M. tuberculosis and could be considered a diagnostic marker for TBM (11). The production of antibodies against the 30-kDa protein in CSF was adopted for use for the differential diagnosis of TBM in partially treated patients with pyogenic meningitis by a cell-based enzyme-linked immunosorbent assay (cell ELISA) with a sensitivity of 92% (12). However, preparation of the 30-kDa protein from the CSF of TBM patients is a prerequisite for establishment of the assay. By the dot ELISA method, polyclonal antibodies to M. tuberculosis culture filtrate protein detected M. tuberculosis antigen in 48 CSF samples (86%) obtained from all 56 patients with suspected TBM (10). In the study of Desai and Pal, the sensitivity of PCR based on the amplification of a 169-bp DNA fragment specific for M. tuberculosis was 31.4%, which is much higher than the sensitivity of culture on Lowenstein-Jensen medium (3.8%) and that of smear by the fluorochrome staining method (1.9%) (5). In another study by Brienz et al., two PCR protocols showed low sensitivities (36% and 53% for the TB AMPLICOR assay and the MPB64 nested PCR, respectively) compared with those of classic microbiological methods (73% and 54% for Ziehl-Neelsen staining and culture, respectively) for the diagnosis of TBM in 91 patients in southeastern Brazil (3). An immunocytological method with CSF-cytospin smears was used by Sumi et al. to detect Mycobacterium antigens in the cytoplasm of CSF monocytes and showed a sensitivity of 72% (20). The overall sensitivities of dot ELISA (for the detection of Mycobacterium antigen in CSF) and PCR were 75% and 40%, respectively (21). These results may have been discrepant for two reasons. First, different assays have distinct sensitivities, even if the same antigen is used. Second, the TBM patients enrolled in those studies may have had different characteristics; for example, they may have had the disease for different periods of time and may have undergone different treatment strategies.
The early diagnosis of TBM is essential for a positive outcome; but some microbiological diagnostic techniques are insensitive, slow, or laborious. In our study, we measured anti-Mycobacterium bovis BCG immunoglobulin G (IgG)- and IgM-secreting cells in both CSF and peripheral blood (PBL) by an enzyme-linked immunospot assay (ELISPOT) and the anti-BCG IgG antibody titer in both CSF and PBL by ELISA. We used the BCG antigen, which was extracted from the pure BCG vaccine, for both ELISPOT and ELISA. We also performed PCR to detect the IS6110 fragment (a repeated insertion sequence specific for M. tuberculosis) in the CSF of TBM patients (6). In the meantime, culture of CSF from every TBM and control patient was done on Lowenstein-Jensen medium. Our aim was to detect a diagnostic method with a good sensitivity and a good specificity that can routinely be used in the laboratory to support the early clinical diagnosis of TBM.
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Eight female patients and 19 male patients with a mean age of 33 years (age range, 10 to 79 years) with other infectious diseases (OINDs) of the CNS were enrolled as controls: 6 had suppurative meningitis with classical clinical and CSF findings and were cured after antibiotic therapy; 9 had cryptococcus meningitis verified with an India ink preparation; 1 had cryptococcus meningitis with an elevated CSF antibody titer, as determined by the latex agglutination method; 10 had acute viral meningoencephalitis with a typical self-limited clinical course, slightly elevated CSF protein concentrations, and increased cell counts dominated by lymphocytes; and 1 had cerebral cysticercosis, as diagnosed by typical radiological presentations and an elevated specific antibody titer in CSF.
The other control group was composed of 15 female patients and 7 male patients with a mean age of 38 years (age range, 16 to 77 years). These patients had other noninfectious neurological diseases (ONDs), including polyneuritis, multiple sclerosis, motor neuron disease, cerebral infarction, etc.
All of the TBM and control patients enrolled in our study were human immunodeficiency virus negative.
About 6 ml CSF (3 ml for ELISPOT and ELISA, 2 ml for PCR, and 1 ml for culture) and 2 ml PBL were obtained from each TBM and control patient. The timing of the lumbar puncture was determined by the clinicians when they wanted to see the effect of treatment and not for experimental purposes alone. One patient (patient 8) was sampled five times, 2 patients (patients 5 and 22) were sampled four times, 4 patients (patients 1, 11, 18, and 20) were sampled three times, 8 patients (patients 2, 4, 6, 7, 12, 14, 15, and 24) were sampled twice, and 10 patients (patients 3, 9, 10, 13, 16, 17, 19, 21, 23, and 25) were sampled only once. The detailed sampling frequency and the time period from the time of disease onset to the sampling day for each patient are listed in Table 1. Altogether 51 pairs of CSF and PBL samples were obtained from 25 TBM patients. All 51 pairs of specimens were tested by ELISPOT. Thirty-nine pairs of specimens from 21 TBM patients were tested by ELISA. Forty-three pairs of specimens from 24 TBM patients were tested by PCR (Table 1). Each control patient was sampled once. Forty-eight pairs of specimens from 48 controls were all tested by ELISPOT, PCR, and ELISA, with one exception, in which the sample was tested only by ELISPOT. Some TBM or control patients did not undergo all three tests because the volume of CSF available was limited.
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TABLE 1. Comparative results for TBM patients by different assaysa
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PBL was collected in heparinized glass tubes. After removing some plasma for ELISA, mononuclear cells (MNCs) were separated by density gradient centrifugation on Ficoll (Huajing Biotech, Shanghai, China), washed three times in 0.05 mol/liter of phosphate-buffered saline (PBS; pH 7.4), diluted in medium, and adjusted to a final concentration of 1 x 106 cells per ml.
Antigen. After the BCG vaccine was washed three times with 0.05 mol/liter of PBS, the BCG vaccine (which was obtained from Shanghai Institute of Biological Products) was put into 5 ml of distilled water. After the bacterial suspension was frozen and thawed five times, 5 ml of the bacterial suspension was sonicated at 50 W for 5 min to make the cell wall of BCG rupture and the protein antigen to be released from the cytoplasm. The suspension was then centrifuged at 4,990 x g for 20 min. The supernatant containing the BCG protein antigen was collected, adjusted to a protein concentration of 10 µg/ml, and stored at 4°C.
Enumeration of anti-BCG IgG- and IgM-secreting cells. To detect cells that secreted BCG antibodies, a solid-phase ELISPOT was performed with microtiter plates with a nitrocellulose bottom (Millipore, Bedford, MA). The plates were coated with 100 µl of BCG (10 µg/ml) in coating buffer (0.05 mol/liter carbonate buffer, pH 9.6) and kept overnight at 4°C. After removal of the coating solution by suction through the nitrocellulose membranes and subsequent washings in PBS, the remaining sites were blocked with 10% FCS (SIBP) at 37°C for 1 h. The plates were then washed with PBS and dried. Samples (200 µl) containing 0.5 x 104 to 1.0 x 104 CSF cells or 2 x 105 peripheral MNCs were added to each well. All examinations were performed in duplicate. After overnight incubation at 37°C in 5% CO2 and a humidified atmosphere, the wells were emptied and washed five times with PBS. One hundred microliters of biotinylated goat anti-human IgG (diluted 1:400; Vector, United Kingdom) or IgM (diluted 1:200; Vector United Kingdom) was added to the appropriate wells for 4 h, followed by the addition of avidin-biotin peroxidase (diluted 1:500; DAKO, Denmark) for 1 h. After the wells were stained with peroxidase, the red-brown immunospots that corresponded to cells with secreted anti-BCG IgG or IgM were counted and standardized to the numbers of spots per 104 CSF cells or peripheral MNCs (15). As in the previous study (15) performed in 1990, as well as in this study, none of the OND controls had anti-BCG IgG- or IgM-secreting cells in CSF; the cutoff value for ELISPOT was determined to be 0. The detection of only one or more antibody-secreting cells was regarded as a positive result.
IS6110 PCR. The primers used in the IS6110 PCR (5' CCT GCG AGC GTA GGC GTC GG3' and 5' CTC GTC CAG CGC CGC TTC GG 3') were reported by Eisenach et al. (6) and amplify a 123-bp fragment called IS6110, a repeated insertion sequence specific for M. tuberculosis. We extracted DNA from 2 ml CSF using classic proteinase K (Takara) digestion and phenol-chloroform extraction, followed by ethanol precipitation. Five microliters of the CSF DNA was amplified in a 25-µl reaction mixture containing 2.5 µl of 10x PCR buffer, 2 µl of deoxynucleoside triphosphates, 0.125 µl of Taq polymerase (Takara), 0.5 µl of each primer, and 14.375 µl of distilled water. The mixture was subjected to 35 cycles of amplification (each cycle consisted of 94°C for 30 s, 65°C for 30 s, and 72°C for 30 s). The PCR products were analyzed on a 2.5% agarose gel. DNA was also extracted from the M. tuberculosis strains from the patients' sputum samples that had been cultured on Lowenstein-Jensen medium in the laboratory. That DNA served as the template for the positive control. A negative control contained all the PCR ingredients except the DNA template, and an internal control (ß-actin) was included for each PCR.
In order to enhance the sensitivity of the IS6110 PCR, we used proteinase K digestion and phenol-chloroform extraction, followed by ethanol precipitation, to extract DNA from the CSF specimens. This method proved to be effective for removal of the inhibitory protein in CSF (18). Because low numbers of organisms may be present in CSF and may be present at levels below the threshold of the PCR (4) we increased the CSF volume to 2 ml for DNA extraction and we used relatively more CSF DNA (5 µl) in the 25-µl reaction mixture. However, the sensitivity of the IS6110 PCR may still be limited by the following factors. The tough cell wall of M. tuberculosis makes the isolation of target DNA difficult (21). Antituberculous therapy may have an effect on the bacterial load, which in turn could result in a reduced yield of DNA (2). IS6110-negative M. tuberculosis strains have also been found, and therefore, infection with an IS6110-negative strain would not be detected by this PCR (17).
Measurement of anti-BCG IgG antibodies by ELISA. To diminish the possibility of false-positive results for CSF antibody detection caused by disruption of the blood-brain barrier (BBB), a single-radial-immunodiffusion (SRID) assay was performed to quantify the IgG in CSF and plasma. Goat anti-human IgG (diluted 1:200; SIBP) was mixed with a 1% solution of agarose (Colab Laboratories) prepared in 0.02 mol/liter of PBS (pH 7.2). This mixture was then added onto immunodiffusion plates. After the plates were cooled, wells (each 3 mm in diameter and 12 mm apart) were cut in the agar plate with a gel cutter (Gelman Instruments). Diluted CSF (1:2) and plasma (1:100) were added to each well, and the plates were incubated at 37oC in a moist chamber. After the antigen-antibody reaction reached equilibrium (after about 36 h), the diameter of the precipitin circle was measured with a spectrum plate reader (Bausch & Lomb). The diameter of the circle was directly proportional to the concentration of IgG in the sample. A standard curve was made by using known concentrations of human IgG (SIBP), and the unknown IgG concentration was determined by comparison of the size of the circle with that from the standard curve.
According to the result of SRID, CSF and plasma were diluted and adjusted so that each pair contained the same IgG concentration. ELISA was then performed to examine the anti-BCG IgG titer in diluted CSF and plasma. Polyvinyl chloride microtiter plates with 96 wells (Costar) were coated with 100 µl BCG (10 µg/ml) in 0.05 mol/liter carbonate buffer (pH 9.6) overnight at 4°C. After the plates were washed three times with PBS-Tween, the coated sites were blocked with 10% FCS for 1 h at 37°C. Then, 100 µl of diluted CSF or plasma was added and the plates were incubated for 1 h at 37°C. After the plates were washed, 100 µl of horseradish peroxidase-conjugated goat anti-human IgG (SIBP) diluted 1:1,000 in 1% bovine serum albumin was added and the plates were incubated for 1 h at 37°C. The color was developed with o-phenylenediamine, and the optical density (OD) at 492 nm was measured. The final result (QBCG IgG) was represented by the ratio of ODCSF and ODplasma (QBCG IgG = ODCSF/ODplasma). Our upper reference value for QBCG IgG was 1.09 (mean + 1.645 [standard deviation]), based on previous results for 50 non-CNS-infected controls with normal BBB function, as indicated by normal CSF/serum albumin ratios and a normal CSF IgG index. To ensure the reproducibility of the result, all 37 pairs of specimens were tested at one time and both SRID and ELISA were performed in triplicate.
CSF culture on Lowenstein-Jensen medium. One milliliter of CSF was centrifuged at 1,008 x g for 30 min. The sediment was then inoculated onto two slants of Lowenstein-Jensen egg medium and incubated at 37°C. The slants were inspected every day for the first week and then weekly for 14 weeks. The results for all positive cultures were confirmed by microscopy with Ziehl-Neelsen staining, and further identification was done by standard biochemical tests.
Statistical analysis. A multivariate regression model was used to analyze the association between the number of CSF anti-BCG IgG- or IgM-secreting cells and the following 10 factors: sex; age; duration of disease; number of treatment days; CSF cell count; the percentages of CSF mononuclear and polynuclear cells; and the concentrations of CSF protein, glucose, and chloride. The multivariate regression model, which allowed for 11 factors (sex; age; duration of disease; number of treatment days; CSF cell count; the percentage of CSF mononuclear and polynuclear cells; the concentrations of CSF protein, glucose, and chloride; and the number of CSF anti-BCG IgG-secreting cells), was used to disclose the association between these factors and the QBCG IgG value. SPSS 12.0 for Windows was used to conduct these statistical analyses.
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FIG. 1. Anti-BCG IgG-secreting cells per 104 cells in CSF and PBL from 51 paired samples from 25 TBM patients, 27 paired samples from 27 OIND patients, and 22 paired samples of 22 OND patients.
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TABLE 2. CSF biological data for 25 TBM patients
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Seventeen of the 25 (68.0%) TBM patients had anti-BCG IgG-secreting cells in PBL, but the numbers were much lower than the numbers of anti-BCG IgG-secreting cells in CSF and varied between 0.05 and 10.5 per 104 peripheral MNCs. Five of the 25 (20.0%) TBM patients had very few anti-BCG IgM-secreting cells in their blood.
Four of the 27 OIND patients (1 with viral meningitis, 1 with cryptococcus meningitis, and 2 with suppurative meningitis) had anti-BCG IgG-secreting cells in their CSF; and the counts were 7.5, 32, 140, and 10 per 104 CSF cells, respectively. No IgG-secreting cells were detected in the CSF of the 22 OND patients. The specificity of ELISPOT was 91.8%. No anti-BCG IgM-secreting cells were detected in the CSF of the control patients. Very few anti-BCG IgG- or IgM-secreting cells were detected in the PBL of OIND and OND patients.
IS6110 PCR. Forty-three CSF specimens from 24 TBM patients and 48 CSF specimens from 48 controls underwent PCR. Eighteen of the 24 TBM patients and 3 of the 48 nontuberculous controls (1 with suppurative meningitis and 2 with noninfectious neurological disease) were PCR positive. None of the three controls were positive by ELISPOT. The sensitivity and specificity of the IS6110 PCR were 75.0% and 93.7%, respectively.
We discovered that one patient (patient 1) who was sampled three times was negative by PCR but positive by ELISA and ELISPOT. The third sample from another patient (patient 5) became PCR negative but ELISPOT, ELISA, and culture positive. These two cases indicated that there might be PCR-inhibitory factors in CSF.
ELISA. Eleven of 21 TBM patients and 4 of the 48 nontuberculous controls (1 with multiple sclerosis, 1 with polyneuritis, and 2 with suppurative meningitis) were ELISA positive. Among the four controls, two patients with suppurative meningitis were also positive by ELISPOT; the other two patients were ELISPOT and PCR negative. The sensitivity of ELISA was 52.4% and the specificity was 91.7%. No significant associations were found between QBCG IgG and disease duration or between QBCG IgG and the number of anti-BCG IgG-secreting cells in the CSF of TBM patients by multivariate regression analysis.
Culture. Three of 25 TBM patients (12.0%) were culture positive (Table 1). The growth of M. tuberculosis was detected in these three patients 30, 38, and 57 days after sampling, respectively (mean, 42 days). Two of the three TBM patients were positive by all tests (ELISPOT, ELISA, and PCR). The other one was positive only by ELISPOT and PCR. None of the 49 controls were culture positive. Taken together, Table 1 presents the comparative results obtained for 25 TBM patients by different assays.
One TBM patient (patient 6) was negative by all three tests, and so the exact diagnosis needs further validation.
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Compared to CSF specimens, very few anti-BCG IgG-secreting cells were found in the PBL of TBM patients, indicating that a specific B-cell response mainly occurred in the CNS. Therefore, the test of CSF should not be replaced by that of PBL. Previous researchers have also demonstrated that CSF-derived cells from patients with TBM have a significantly higher proliferation response to purified protein derivative, which is suggestive of an intrathecal immune response (14).
The impact of drug resistance upon bacterial clearance from CSF is unknown. However, evidence from patients with pulmonary tuberculosis suggests that streptomycin and isoniazid are responsible for the majority of bactericidal activity in the first few days of treatment (16). However, in our study multivariate analysis did not show any significant association between the number of treatment days and the number of CSF anti-BCG IgG- or IgM-secreting cells. The decrease in the number of CSF IgG-secreting cells later in the disease was part of the natural course of disease.
Four control patients (one with viral meningitis, one with cryptococcus meningitis, and two with suppurative meningitis) were positive by ELISPOT. The two controls with suppurative meningitis were also positive by ELISA. In an earlier study, we also found that one control with cryptococcus meningitis was positive by ELISPOT (15). We speculate that cross-reaction of the antigen between M. tuberculosis and other infectious organisms might be responsible for the phenomenon. A single antigen encoded by a certain fragment of the M. tuberculosis genome, such as the 38-kDa protein, Mtb11, Mtb8, and Mtb48, will cause less cross-reaction and is found to be highly specific for M. tuberculosis but lacks sensitivity (8). In a study of Houghton et al. (8), these antigens have been combined into fusion recombinants (polyproteins) by gene engineering. TbF6 is a fusion of the 38-kDa protein, Mtb11, Mtb8, and Mtb48. TbF10 is a fusion of the 8-kDa protein, Mtb11, and Mtb8. These fusion recombinants are demonstrated to have a high degree of clinical sensitivity for the detection of active tuberculosis, while they maintain a high degree of specificity (8). Such recombinant antigens may solve the problem in the future.
Antibodies to Mycobacterium can be seen in CSF from patients with various diseases that are accompanied by damage of the BBB, which will lead to false-positive results in antibody detection assays. In our study, paired CSF and plasma samples were diluted to the same IgG concentration before ELISA to diminish the effect of different permeabilities through the BBB. However, the quantification of IgG by SRID was laborious and time-consuming. At least 2 days was needed; and the outcome was poor, with a sensitivity of only about 52.4%, suggesting that ELISA is not suitable for use alone for the diagnosis of TBM. Four controls were positive by ELISA, and two of them were also positive by ELISPOT. Future studies may focus on more effective methods of diminishing the effect of BBB damage and detecting a more specific antigen with less cross-reaction with other organisms.
IS6110 PCR was not as sensitive as ELISPOT in our study. Many factors may affect the sensitivity of PCR, such as high CSF protein concentrations, low numbers of organisms in CSF, antituberculous therapy, and infection with IS6110-negative M. tuberculosis strains. (21) Expensive reagents and instruments as well as isolated laboratory areas are needed, which also limit its utility in developing countries, where the incidence of TBM is high.
Three nontuberculous controls (one with suppurative meningitis and two with noninfectious neurological diseases) were PCR positive. None of them was positive by ELISPOT or ELISA. As the diagnoses for these patients were definite, the false-positive results may have been due to contamination.
In conclusion, our study has demonstrated that anti-BCG IgG-secreting cell detection in CSF by ELISPOT is the most valuable test because of its high degree of sensitivity compared to the results of ELISA and IS6110 PCR. The number of CSF anti-BCG IgG-secreting cells is higher in the early phase of TBM and then gradually declines, revealing that ELISPOT is particularly effective for the early diagnosis of TBM.
We state that the study's authors do not have a commercial or other association that might pose a conflict of interest (e.g., pharmaceutical stock ownership, consultancy, advisory board membership, relevant patents, or research funding).
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