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Journal of Clinical Microbiology, May 2007, p. 1628-1633, Vol. 45, No. 5
0095-1137/07/$08.00+0 doi:10.1128/JCM.00234-07
Copyright © 2007, American Society for Microbiology. All Rights Reserved.
Exceptionally High Representation of Burkholderia cepacia among B. cepacia Complex Isolates Recovered from the Major Portuguese Cystic Fibrosis Center
Mónica V. Cunha,1
Ana Pinto-de-Oliveira,1,2
Luís Meirinhos-Soares,3
Maria José Salgado,4
José Melo-Cristino,4
Susana Correia,5
Celeste Barreto,5 and
Isabel Sá-Correia1*
IBBInstitute for Biotechnology and Bioengineering, Centre for Biological and Chemical Engineering, Instituto Superior Técnico, Av. Rovisco Pais, 1049-001 Lisboa, Portugal,1
Instituto de Microbiologia, Faculdade de Medicina da Universidade de Coimbra, Rua Larga, 3004-504 Coimbra, Portugal,2
Direcção de Comprovação da Qualidade do Infarmed, Parque de Saúde de Lisboa, Avenida do Brasil, no. 53, 1749-004 Lisboa, Portugal,3
Laboratório de Bacteriologia,4
e Centro Especializado em Fibrose Quística, Hospital de Santa Maria, Av. Prof. Egas Moniz, Lisboa, Portugal5
Received 30 January 2007/
Returned for modification 2 March 2007/
Accepted 7 March 2007

ABSTRACT
Burkholderia cepacia, a species found infrequently in cystic
fibrosis (CF), was isolated from 85% of patients infected with
bacteria of the
B. cepacia complex that visited the major Portuguese
CF center, in Lisbon, during 2003 to 2005. A detailed molecular
analysis revealed that this was mainly due to two
B. cepacia clones. These clones were indistinguishable from two strains
isolated from intrinsically contaminated nonsterile saline solutions
for nasal application, detected during routine market surveillance
by the Portuguese Medicines and Health Products Authority.

TEXT
Burkholderia cepacia complex (BCC) bacteria are opportunistic
pathogens that may colonize and/or infect patients with cystic
fibrosis (CF), an inherited disorder that, among other clinical
manifestations, predisposes individuals to recurrent respiratory
infections and lung damage (
15). Epidemiological surveys carried
out in several countries indicated that all nine BCC species
can be recovered from respiratory secretions of CF patients,
but
Burkholderia cenocepacia and
Burkholderia multivorans are
predominant (
17). A remarkable exception to this observation
is the epidemiological analysis carried out by our laboratory
at the major Portuguese CF center (
6). Although the prevalence
of
B. cenocepacia (52%) was confirmed, a significant percentage
(36%) of the patients at the CF center of Hospital de Santa
Maria (HSM) during 1995 to 2002 were colonized or infected with
B. cepacia (
6). This contrasts with previous studies performed
in Canada, the United States, Italy, and France, where
B. cepacia incidence ranged from 0.2% to 7.7% (
1,
3,
4,
13,
21,
23). The
reason for the unexpectedly high representation of
B. cepacia during this surveillance period could not be determined. By
the end of 2003, a routine market surveillance analysis performed
by Infarmed, the Portuguese Medicines and Health Products Authority,
revealed that several batches of nonsterile saline solutions
from two local manufacturers greatly exceeded the microbiological
quality limits (

10
2 CFU/ml) established by European Pharmacopoeia
VII (
7). Preliminary identification by gas chromatography analysis
of the fatty acid methyl esters (MIDI; Sherlock, Newark, DE)
suggested that the isolated bacteria belong to the species
B. cepacia. Following the confirmation of the identification by
molecular methods described below, the contaminated batches
were immediately withdrawn from the market. New contaminated
batches were detected later, in March 2006. Since saline is
used in inhalant therapy by CF patients, a correlation between
this contamination and the unusually high representation of
B. cepacia registered at the CF center under surveillance (
6)
was considered. To test this hypothesis, molecular analysis
of 95 BCC isolates recovered from sputum samples from 13 CF
patients on selective
B. cepacia solid medium (Selectatab; Mast
Diagnostics, Merseyside, United Kingdom) from November 2002
to March 2006 was carried out, and their genetic relatedness
to the saline isolates was assessed. In general, sputum samples
from CF patients were obtained every 2 to 3 months during periodic
consultation to monitor their clinical status. Samples were
cultured more often for patients showing clinical deterioration.
All serial isolates obtained from chronically infected patients
(80% of patients examined) were included in the study. A patient
was considered chronically infected when three positive cultures
of BCC strains were isolated within an 8-month period.
Distribution of isolates from CF patients and saline among BCC species.
During the 3.5-year surveillance period in this study, 85% of BCC-positive CF patients under surveillance at the HSM CF center harbored strains of the species B. cepacia (recA HaeIII restriction fragment length polymorphism [RFLP] type D, E, K, Z, or AG). This conclusion was based on polymorphisms of the recA gene with HaeIII and species-specific recA-directed PCR, performed as described before (16). B. cenocepacia (recA HaeIII RFLP type G, AN, or AU) was present in 23% of the CF patients examined, 15% of them also being colonized or infected with B. cepacia (Table 1). While B. cenocepacia infections predominated until 2001 (6), B. cepacia became the most represented species after November 2002, its incidence peaking in 2004 (Table 1). The analysis of saline isolates indicated that they belonged to recA HaeIII RFLP type D or E (Table 2).
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TABLE 1. Results of molecular analysis of BCC isolates from CF patients under surveillance at HSM from November 2002 to March 2006a
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TABLE 2. Results of the molecular analysis of B. cepacia isolates recovered from contaminated saline solutions by Infarmed at the end of 2003 and in March 2006
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Genetic relatedness of clinical and saline isolates of B. cepacia.
The 60 clinical isolates of
B. cepacia tested generated five
ribopatterns, designated 2, 12, 17, 19, and 24 (Fig.
1; Table
1), while the 35
B. cenocepacia isolates generated three ribopatterns,
designated 7, 15, and 21 (Table
1). Ribotyping was performed
as described by Cunha et al. (
6), using as a probe fluorescein-labeled
16S and 23S rDNA from
B. cenocepacia J2315 chromosomal DNA,
amplified with the primers 16SF (5'-GATTGAACGCTGGCGGCATG-3'),
16SR (5'-GAGGTGATCCAGCCGCACCT-3'), 23SF (5'-AAGCGATCAAGTGCATGTGGTG-3'),
and 23SR (5'-GATCAAGCCTTACGGGCAATTA-3'). The 33
B. cepacia isolates
recovered by Infarmed in December 2003 and March 2006 from nine
contaminated lots of saline generated four different ribopatterns
(Fig.
2A; Table
2). Isolates with ribopattern 19 were recovered
on both occasions from the saline produced by manufacturer B.
Remarkably, ribopatterns 17 and 19, generated by 23
B. cepacia saline isolates, were also generated by 28
B. cepacia isolates
obtained from 9 CF patients receiving care at HSM from September
2003 to March 2006 (Table
1). RFLP-pulsed-field gel electrophoresis
(PFGE) analysis, carried out according to standard protocols
(
22), confirmed the clonality of clinical and saline
B. cepacia isolates with ribopattern 19 or 17, since all the isolates with
the same ribotype gave rise to identical RFLP-PFGE patterns
(Fig.
2B). This result indicates that the majority of the respiratory
infections with
B. cepacia registered in 2003 to 2005 were due
to two strains, with ribopatterns 17 and 19 and RFLP-PFGE profiles
I and II, respectively, that were indistinguishable by ribotyping
and RFLP-PFGE profiling from the two
B. cepacia clones isolated
in 2003 and 2006 from the intrinsically contaminated saline
solutions. Moreover, prior to the date of the detection of the
first lots of contaminated saline solutions (the end of 2003),
no
B. cepacia isolate with ribopattern 17 or 19 had been recovered
from CF patients (Fig.
1) (
6). Furthermore, patients with ribopattern
17 or 19 isolates had never been colonized/infected with BCC
bacteria (Fig.
1). Indeed, the very strong increase in the incidence
of
B. cepacia in the CF center under surveillance, registered
during 2003 and 2004, coincided with the detection in the market
of contaminated saline solutions. Three
B. cepacia strains different
from those present in the contaminated saline also colonized
and/or infected the CF patients receiving care at HSM from 2003
through 2006 (Table
1). These strains also contributed to the
unusually high representation of
B. cepacia species in this
CF center during the surveillance period, but the source of
infection remains unclear.
Clinical outcome of CF patients infected with B. cepacia or B. cenocepacia.
During the surveillance period in this study, no death was registered
among the CF patients harboring BCC bacteria. In general, the
CF patients chronically infected with
B. cenocepacia or
B. cepacia strains remained clinically stable, in particular those harboring
strains indistinguishable from the saline clones. The only exception
was patient AF, who had already presented with moderate lung
disease before testing positive for
B. cepacia but whose clinical
condition suffered a rapid deterioration (as indicated by lung
function and number of hospitalizations) following colonization
for almost 18 months with a
B. cepacia strain of ribopattern
2. Although this clinical strain was unrelated to the saline
clones, a
B. cepacia strain with ribopattern 17 was sporadically
isolated from this patient, as well as a
B. cenocepacia strain
(Table
1).
Concluding remarks.
Bacteria of the BCC are resistant to multiple antimicrobials and to diverse growth inhibitors, which they can even use as carbon sources (5). These bacteria also have minimal nutritional requirements, which enables them to grow in aqueous products, including disinfectants (10, 19). Contamination of albuterol and sulbutamol nebulization solutions (2, 9), nebulizers (11), mouthwash (18), nasal sprays (8), and ultrasound gel (12) has resulted in outbreaks of nosocomially acquired infection by BCC bacteria. Although results from this study appear to suggest an epidemiological relationship between the intrinsically contaminated saline solutions and CF patients colonized/infected with the less commonly isolated species B. cepacia, it was not possible to establish a definitive link between the use of contaminated saline solutions and patient contamination. Furthermore, other B. cepacia strains with no direct relation to the clones detected in the contaminated saline solutions also contributed to the unusually high representation of B. cepacia registered in this CF center during the period under analysis, suggesting other sources of infection. A significant proportion of the CF patients that were not colonized with the two clones under discussion harbored unique strains of B. cepacia or B. cenocepacia. This observation indicates that although transmission of these bacteria is significant in the colonization of CF patients, in a CF center that follows the recommended control measures, as is the case at the Lisbon CF center, other primary sources of infection must account for many of the cases. It is likely that the environment may act as reservoir for novel BCC infections (14, 20, 24). This study supports the recommendation for the exclusive use of sterile saline solutions by CF patients. It also highlights the importance of the continuous monitoring of medications for microbial contamination and the surveillance of unexplained outbreaks involving less common pathogens. In particular, attention should be given to the usually poorly represented species, like B. cepacia, especially when patients with underlying lung disease and increased risk, such as CF patients, are involved.

ACKNOWLEDGMENTS
The contributions of L. Lito (HSM) and M. Miranda, A. Galvão,
and E. Bértolo (Infarmed) to this study are gratefully
acknowledged.
M. V. Cunha is the recipient of a fellowship (SFRH/BPD/14911/2004) from Fundação para a Ciência e a Tecnologia (FCT).

FOOTNOTES
* Corresponding author. Mailing address: IBB. Centre for Biological and Chemical Engineering, Instituto Superior Técnico, Av. Rovisco Pais, 1049-001 Lisboa, Portugal. Phone: 351-218417682. Fax: 351-218419199. E-mail:
isacorreia{at}ist.utl.pt 
Published ahead of print on 14 March 2007. 

REFERENCES
1 - Agodi, A., E. Mahenthiralingam, M. Barchitta, V. Giannino, A. Sciacca, and S. Stefani. 2001. Burkholderia cepacia complex infection in Italian patients with cystic fibrosis: prevalence, epidemiology, and genomovar status. J. Clin. Microbiol. 39:2891-2896.[Abstract/Free Full Text]
2 - Balkhy, H. H., G. Cunningham, C. Francis, M. A. Almuneef, G. Stevens, N. Akkad, A. Elgammal, A. Alassiri, E. Furukawa, F. K. Chew, M. Sobh, D. Daniel, G. Poff, and Z. A. Memish. 2005. A National Guard outbreak of Burkholderia cepacia infection and colonization secondary to intrinsic contamination of albuterol nebulization solution. Am. J. Infect. Control 33:182-188.[CrossRef][Medline]
3 - Brisse, S., C. Cordevant, P. Vandamme, P. Bidet, C. Loukil, G. Chabanon, M. Lange, and E. Bingen. 2004. Species distribution and ribotype diversity of Burkholderia cepacia complex isolates from French patients with cystic fibrosis. J. Clin. Microbiol. 42:4824-4827.[Abstract/Free Full Text]
4 - Campana, S., G. Taccetti, N. Ravenni, F. Favari, L. Cariani, A. Sciacca, D. Savoia, A. Collura, E. Fiscarelli, G. De Intinis, M. Busetti, A. Cipolloni, A. d'Aprile, E. Provenzano, I. Collebrusco, P. Frontini, G. Stassi, M. Trancassini, D. Tovagliari, A. Lavitola, C. J. Doherty, T. Coenye, J. R. W. Govan, and P. Vandamme. 2005. Transmission of Burkholderia cepacia complex: evidence for new epidemic clones infecting cystic fibrosis patients in Italy. J. Clin. Microbiol. 43:5136-5142.[Abstract/Free Full Text]
5 - Coenye, T., and P. Vandamme. 2003. Diversity and significance of Burkholderia cepacia occupying diverse ecological niches. Environ. Microbiol. 5:719-729.[CrossRef][Medline]
6 - Cunha, M. V., J. H. Leitão, E. Mahenthiralingam, P. Vandamme, L. Lito, C. Barreto, M. J. Salgado, and I. Sá-Correia. 2003. Molecular analysis of Burkholderia cepacia complex isolates from a Portuguese cystic fibrosis center: a seven-year study. J. Clin. Microbiol. 41:4113-4120.[Abstract/Free Full Text]
7 - Directorate for the Quality of Medicines of the Council of Europe. European Pharmacopoeia, 4th ed. Council of Europe, Strasbourg, France.
8 - Dolan, S., E. Dowell, S. Valdez, J. J. LiPuma, and J. James. 2005. An outbreak of Burkholderia cepacia complex associated with an intrinsically contaminated nasal spray product. Am. J. Infect. Control 33:e110-e111.[CrossRef]
9 - Ghazal, S. S., K. Al-Mudaimeegh, and E. M. A. Fakihi. 2006. Outbreak of Burkholderia cepacia bacteremia in immunocompetent children caused by contaminated nebulized sulbutamol in Saudi Arabia. Am. J. Infect. Control 34:394-398.[CrossRef][Medline]
10 - Holmes, B. 1986. The identification of Pseudomonas cepacia and its occurrence in clinical material. J. Appl. Bacteriol. 61:299-314.[Medline]
11 - Hutchinson, G. R., S. Parker, J. A. Pryor, F. Duncan-Skingle, P. N. Hoffman, M. E. Hodson, M. E. Kaufmann, and T. L. Pitt. 1996. Home-use nebulizers: a potential source of Burkholderia cepacia and other colistin-resistant, gram-negative bacteria in patients with cystic fibrosis. J. Clin. Microbiol. 34:584-587.[Abstract]
12 - Jacobson, M., R. Wray, D. Kovach, D. Henry, D. Speert, and A. Matlow. 2006. Sustained endemicity of Burkholderia cepacia complex in a pediatric institution, associated with contaminated ultrasound gel. Infect. Control Hosp. Epidemiol. 27:362-366.[CrossRef][Medline]
13 - LiPuma, J. J., T. Spilker, L. H. Gill, P. W. Campbell III, L. Liu, and E. Mahenthiralingam. 2001. Disproportionate distribution of Burkholderia cepacia complex species and transmissibility markers in cystic fibrosis. Am. J. Respir. Crit. Care Med. 164:92-96.[Abstract/Free Full Text]
14 - LiPuma, J. J., T. Spilker, T. Coenye, and C. F. Gonzalez. 2002. An epidemic Burkholderia cepacia complex strain identified in soil. Lancet 359:2002-2003.[CrossRef][Medline]
15 - Lyczak, J. B., C. L. Cannon, and G. B. Pier. 2002. Lung infections associated with cystic fibrosis. Clin. Microbiol. Rev. 15:194-222.[Abstract/Free Full Text]
16 - Mahenthiralingam, E., J. Bischof, S. K. Byrne, C. Radomski, J. E. Davies, Y. Av-Gay, and P. Vandamme. 2000. DNA-based diagnostic approaches for identification of Burkholderia cepacia complex, Burkholderia vietnamiensis, Burkholderia multivorans, Burkholderia stabilis, and Burkholderia cepacia genomovars I and III. J. Clin. Microbiol. 38:3165-3173.[Abstract/Free Full Text]
17 - Mahenthiralingam, E., T. A. Urban, and J. B. Goldberg. 2005. The multifarious, multireplicon Burkholderia cepacia complex. Nat. Rev. Microbiol. 3:144-156.[CrossRef][Medline]
18 - Matrician, L., G. Ange, S. Burns, W. L. Fanning, C. Kioski, G. C. Cage, and K. K. Komatsu. 2000. Outbreak of nosocomial Burkholderia cepacia infection and colonization associated with intrinsically contaminated mouthwash. Infect. Control Hosp. Epidemiol. 21:739-741.[CrossRef][Medline]
19 - Oie, S., and A. Kamiya. 1996. Microbial contamination of antiseptics and disinfectants. Am. J. Infect. Control. 24:389-395.[CrossRef][Medline]
20 - Pallud, C., V. Viallard, J. Balandreau, P. Normand, and G. Grundmann. 2001. Combined use of a specific probe and PCAT medium to study Burkholderia in soil. J. Microbiol. Methods 47:25-34.[CrossRef][Medline]
21 - Reik, R., T. Spilker, and J. J. LiPuma. 2005. Distribution of Burkholderia cepacia complex species among isolates recovered from persons with or without cystic fibrosis. J. Clin. Microbiol. 43:2926-2928.[Abstract/Free Full Text]
22 - Richau, J. A., J. H. Leitão, M. Correia, L. Lito, M. J. Salgado, C. Barreto, P. Cescutti, and I. Sá-Correia. 2000. Molecular typing and exopolysaccharide biosynthesis of Burkholderia cepacia isolates from a Portuguese cystic fibrosis center. J. Clin. Microbiol. 38:1651-1655.[Abstract/Free Full Text]
23 - Speert, D. P., D. Henry, P. Vandamme, M. Corey, and E. Mahenthiralingam. 2002. Epidemiology of Burkholderia cepacia complex in patients with cystic fibrosis in Canada: geographical distribution and clustering of strains. Emerg. Infect. Dis. 8:181-187.[Medline]
24 - Vanlaere, E., T. Coenye, E. Samyn, C. Van den Plas, J. Govan, F. De Baets, K. De Boeck, C. Knoop, and P. Vandamme. 2005. A novel strategy for the isolation and identification of environmental Burkholderia cepacia complex bacteria. FEMS Microbiol. Lett. 249:303-307.[CrossRef][Medline]
Journal of Clinical Microbiology, May 2007, p. 1628-1633, Vol. 45, No. 5
0095-1137/07/$08.00+0 doi:10.1128/JCM.00234-07
Copyright © 2007, American Society for Microbiology. All Rights Reserved.
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