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Journal of Clinical Microbiology, August 2007, p. 2754-2755, Vol. 45, No. 8
0095-1137/07/$08.00+0 doi:10.1128/JCM.00579-07
Copyright © 2007, American Society for Microbiology. All Rights Reserved.
Three New Macrolide Efflux (mef) Gene Variants in Streptococcus agalactiae

LETTER
Streptococcus agalactiae (group B streptococcus [GBS]) is the
most common cause of neonatal sepsis (
9). Penicillin is used
for intrapartum prophylaxis, but erythromycin or clindamycin
is recommended for patients allergic to penicillin (
3). There
are two major mechanisms of erythromycin resistance in
S. agalactiae,
(i) erythromycin ribosomal methylase, mediated by
ermB,
ermA,
ermTR, or
ermC, which confers cross-resistance to macrolides,
lincosamides, and streptogramin B (MLS
B phenotype), and (ii)
a less common macrolide efflux pump, mediated by
mef (
7), which
confers resistance to 14- and 15-membered macrolides only (M
phenotype). The major
mef variants,
mefE and
mefA, were originally
identified in
S. pneumoniae and
S. pyogenes, respectively (
5,
11); both are found in
S. agalactiae (
2), although
mefE is much
more common (
4,
12).
Recently, we tested 512 GBS isolates from Australia, Hong Kong, and South Korea by using a multiplex PCR-based reverse line blot (mPCR/RLB) assay to identify nine resistance markers and identified mef in 22 (12). However, we did not distinguish mef variants. Subsequently, we tested a total of 1,629 GBS clinical isolates (including the original 512) from nine countries by using the same mPCR/RLB, except that two new probe pairs, specific for mefA and mefE, were added (Table 1). Isolates were typed by using a three-set genotyping system which identifies the molecular serotype (MS), surface protein genes, and mobile genetic elements, as described previously (8). Antibiotic susceptibilities to erythromycin, clindamycin, and tetracycline were measured by E-test (AB Biodisk; Australia Laboratory Services Pty. Ltd.) and interpreted as recommended by the Clinical and Laboratory Standards Institute (12).
Forty five (2.7%) of 1,629 isolates were positive for
mef, and
of these, 35 contained
mefE, 7 contained
mefA, and 3 gave weak
or variable signals with
mefE- and
mefA-specific probes. These
three isolates were among 16
mef-positive isolates from Hong
Kong. Their genotypes and phenotypic susceptibilities to erythromycin,
clindamycin, and tetracycline are shown in Table
2. All three
had the M phenotype and MS Ia but atypical genotypes. MS Ia
usually has the surface protein gene
alp1 and insertion sequence
IS
1381 (
8,
10). Two of these isolates had
alp1 but, instead
of IS
1381, carried the type II intron GBSi1, usually found in
MS III but rarely in other serotypes (
10). The other isolate
had neither the surface protein gene nor the insertion sequence.
From each of these three isolates,
mef was amplified and sequenced
with the primers shown in Table
1. The full sequences indicated
that all were novel
mef variants not previously described in
a GBS. They were deposited in GenBank with accession numbers
DQ445269 to DQ445271. DQ445271 and DQ445270 were 99% similar
to each other but only 88% and 89% homologous with
mefE (GenBank
accession no. AF227521) and
mefA (GenBank accession no. AY064721),
respectively. They shared 99 to 100% homology with a
mef variant
recently identified in
Streptococcus dysgalactiae (a group G
streptococcus) (GenBank accession no. AM168138 and AY355405)
(
1). DQ445269 has not been described before; it had 89% homology
with
mefA (GenBank accession no. AY064721) and the novel group
G streptococcus
mef gene (GenBank accession no. AY355405), 91%
homology with
mefE (GenBank accession no. AY227521), and 92%
homology with another
mef variant,
mefI, described in
Streptococcus pneumoniae (GenBank accession no. AJ971089) (
6). The inconsistent
mPCR/RLB results for these isolates can be explained by mutations
in the mefAESb and mefAEAb regions. New primers and probes will
be required to detect them reliably by mPCR/RLB. For these novel
mef variants, we propose the names
mefG (for DQ445270 and DQ445271)
and
mefB (for DQ445269) to reflect the beta-hemolytic streptococcus
groups in which they were first identified.
These findings and the atypical genotype patterns suggest that these strains have arisen by recombination. Further investigation will be required to determine their clinical significance.

ACKNOWLEDGMENTS
We sincerely thank Margaret Ip, Department of Microbiology,
The Chinese University of Hong Kong, and the Prince of Wales
Hospital, Hong Kong, for allowing us to study their isolates.
This work was partially supported by National Health and Medical Research Council grant 358351 to G.L.G. and F.K.

FOOTNOTES

Published ahead of print on 27 June 2007.


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Yongwei Cai
Department of Dermatology Hangzhou Third People's Hospital Hangzhou, Zhejiang Province, Peoples Republic of China
Fanrong Kong
Gwendolyn L. Gilbert*
Centre for Infectious Diseases and Microbiology (CIDM) Institute of Clinical Pathology and Medical Research (ICPMR) Westmead, New South Wales, Australia
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* Phone: (612) 9845 6255, Fax: (612) 9893 8659, E-mail: lyng{at}icpmr.wsahs.nsw.gov.au |
Journal of Clinical Microbiology, August 2007, p. 2754-2755, Vol. 45, No. 8
0095-1137/07/$08.00+0 doi:10.1128/JCM.00579-07
Copyright © 2007, American Society for Microbiology. All Rights Reserved.
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