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Journal of Clinical Microbiology, August 2003, p. 3526-3531, Vol. 41, No. 8
0095-1137/03/$08.00+0 DOI: 10.1128/JCM.41.8.3526-3531.2003
Copyright © 2003, American Society for Microbiology. All Rights Reserved.
Department of Anesthesia and Perioperative Care,3 Cardiovascular Research Institute,1 Division of Pulmonary and Critical Care Medicine,2 Department of Medicine, University of California, San Francisco, San Francisco, California 941434
Received 4 February 2003/ Returned for modification 22 April 2003/ Accepted 1 May 2003
We mapped the coding single nucleotide polymorphisms in four toxin genesexoS, exoT, exoU, and exoYof the Pseudomonas aeruginosa type III secretion system among several clinical isolates. We then used this information to design a multiplex PCR assay based on the simultaneous amplification of fragments of these genes. Eight strains of known genotype were used to test our multiplex PCR method, which showed 100% sensitivity and specificity in this small sample size. This assay appears to be promising for the rapid and accurate genotyping of the presence of these genes in clinical strains of P. aeruginosa.
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