Bacteriology:
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Diagnosis of Bartonella Endocarditis by a Real-Time Nested PCR Assay Using Serum |
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Zaher Zeaiter, Pierre-Edouard Fournier, Gilbert Greub, and Didier Raoult |
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J. Clin. Microbiol. 2003. 41: 919-925.
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Heterogeneity of cag Genotypes in Helicobacter pylori Isolates from Human Biopsy Specimens |
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Maria Luisa Tomasini, Stefania Zanussi, Michele Sozzi, Rosamaria Tedeschi, Giancarlo Basaglia, and Paolo De Paoli |
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J. Clin. Microbiol. 2003. 41: 976-980.
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Invasive Streptococcus iniae Infections Outside North America |
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Susanna K. P. Lau, Patrick C. Y. Woo, Herman Tse, Kit-Wah Leung, Samson S. Y. Wong, and Kwok-Yung Yuen |
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J. Clin. Microbiol. 2003. 41: 1004-1009.
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Serology and Genetics of the Flagellar Antigen of Escherichia coli O157:H7a,7c |
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Yuli A. Ratiner, Saara Salmenlinna, Marjut Eklund, Markku Keskimäki, and Anja Siitonen |
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J. Clin. Microbiol. 2003. 41: 1033-1040.
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Detection and Characterization of the Hemolysin Genes in Aeromonas hydrophila and Aeromonas sobria by Multiplex PCR |
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Gehua Wang, Clifford G. Clark, Chenyi Liu, Chad Pucknell, Cindy K. Munro, Tamara M. A. C. Kruk, Richard Caldeira, David L. Woodward, and Frank G. Rodgers |
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J. Clin. Microbiol. 2003. 41: 1048-1054.
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Comparison of Broth Microdilution, E Test, and Agar Dilution Methods for Antibiotic Susceptibility Testing of Campylobacter jejuni and Campylobacter coli |
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Petra Luber, Edda Bartelt, Elke Genschow, Jutta Wagner, and Helmut Hahn |
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J. Clin. Microbiol. 2003. 41: 1062-1068.
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Detection and Identification of Bartonella Species Pathogenic for Humans by PCR Amplification Targeting the Riboflavin Synthase Gene (ribC) |
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G. Johnson, M. Ayers, S. C. C. McClure, S. E. Richardson, and R. Tellier |
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J. Clin. Microbiol. 2003. 41: 1069-1072.
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Quantitative Microbiologic Models for Preterm Delivery |
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Andrew B. Onderdonk, Mei-Ling Lee, Ellice Lieberman, Mary L. Delaney, and Ruth E. Tuomala |
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J. Clin. Microbiol. 2003. 41: 1073-1079.
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Molecular Characterization of Gentamicin-Resistant Enterococci in the United States: Evidence of Spread from Animals to Humans through Food |
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S. M. Donabedian, L. A. Thal, E. Hershberger, M. B. Perri, J. W. Chow, P. Bartlett, R. Jones, K. Joyce, S. Rossiter, K. Gay, J. Johnson, C. Mackinson, E. Debess, J. Madden, F. Angulo, and M. J. Zervos |
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J. Clin. Microbiol. 2003. 41: 1109-1113.
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Influence of Culture Conditions on the Fatty Acid Profiles of Laboratory-Adapted and Freshly Isolated Strains of Helicobacter pylori |
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Christiane Scherer, Karl-D. Müller, Peter-M. Rath, and Rainer A. M. Ansorg |
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J. Clin. Microbiol. 2003. 41: 1114-1117.
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New Types of Toxin A-Negative, Toxin B-Positive Strains among Clostridium difficile Isolates from Asia |
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Maja Rupnik, Naoki Kato, Miklavz Grabnar, and Haru Kato |
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J. Clin. Microbiol. 2003. 41: 1118-1125.
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Comparison of Four Chromogenic Media and Hektoen Agar for Detection and Presumptive Identification of Salmonella Strains in Human Stools |
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J. M. Perez, P. Cavalli, C. Roure, R. Renac, Y. Gille, and A. M. Freydiere |
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J. Clin. Microbiol. 2003. 41: 1130-1134.
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Two-Center Collaborative Evaluation of the Performance of the BD Phoenix Automated Microbiology System for Identification and Antimicrobial Susceptibility Testing of Enterococcus spp. and Staphylococcus spp. |
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Anne-Marie Fahr, Ulrich Eigner, Martina Armbrust, Alexandra Caganic, Giuseppe Dettori, Carlo Chezzi, Luca Bertoncini, Magda Benecchi, and Maria Grazia Menozzi |
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J. Clin. Microbiol. 2003. 41: 1135-1142.
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Patterns of Resistance Associated with Integrons, the Extended-Spectrum ß-Lactamase SHV-5 Gene, and a Multidrug Efflux Pump of Klebsiella pneumoniae Causing a Nosocomial Outbreak |
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Paul Gruteke, Wil Goessens, Jan van Gils, Paul Peerbooms, Nicole Lemmens-den Toom, Marga van Santen-Verheuvel, Alex van Belkum, and Henri Verbrugh |
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J. Clin. Microbiol. 2003. 41: 1161-1166.
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Identification of a Mutation Associated with Erythromycin Resistance in Bordetella pertussis: Implications for Surveillance of Antimicrobial Resistance |
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J. M. Bartkus, B. A. Juni, K. Ehresmann, C. A. Miller, G. N. Sanden, P. K. Cassiday, M. Saubolle, B. Lee, J. Long, A. R. Harrison, Jr., and J. M. Besser |
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J. Clin. Microbiol. 2003. 41: 1167-1172.
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Bacillus anthracis Virulence in Guinea Pigs Vaccinated with Anthrax Vaccine Adsorbed Is Linked to Plasmid Quantities and Clonality |
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Pamala R. Coker, Kimothy L. Smith, Patricia F. Fellows, Galena Rybachuck, Konstantin G. Kousoulas, and Martin E. Hugh-Jones |
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J. Clin. Microbiol. 2003. 41: 1212-1218.
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Five-Test Simple Scheme for Species-Level Identification of Clinically Significant Coagulase-Negative Staphylococci |
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Adriana N. De Paulis, Silvia C. Predari, Carlos D. Chazarreta, and Jorge E. Santoianni |
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J. Clin. Microbiol. 2003. 41: 1219-1224.
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Novel Sample Preparation Method for Safe and Rapid Detection of Bacillus anthracis Spores in Environmental Powders and Nasal Swabs |
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Vicki A. Luna, Debra King, Carisa Davis, Tony Rycerz, Matthew Ewert, Andrew Cannons, Philip Amuso, and Jacqueline Cattani |
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J. Clin. Microbiol. 2003. 41: 1252-1255.
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Conventional and Molecular Methods for Verification of Results Obtained with BacT/Alert Nonvent Blood Culture Bottles |
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Elizabeth M. Marlowe, Linda Gibson, James Hogan, Shannon Kaplan, and David A. Bruckner |
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J. Clin. Microbiol. 2003. 41: 1266-1269.
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Persistence of Colonization of Intestinal Mucosa by a Probiotic Strain, Lactobacillus casei subsp. rhamnosus Lcr35, after Oral Consumption |
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Christophe De Champs, Nathalie Maroncle, Damien Balestrino, Chantal Rich, and Christiane Forestier |
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J. Clin. Microbiol. 2003. 41: 1270-1273.
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Construction and Evaluation of Internal Control DNA for PCR Amplification of Chlamydia trachomatis DNA from Urine Samples |
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Fotini Betsou, Katy Beaumont, Jean Marie Sueur, and Jeanne Orfila |
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J. Clin. Microbiol. 2003. 41: 1274-1276.
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Paracoccus yeeii sp. nov. (Formerly CDC Group EO-2), a Novel Bacterial Species Associated with Human Infection |
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Maryam I. Daneshvar, Dannie G. Hollis, Robbin S. Weyant, Arnold G. Steigerwalt, Anne M. Whitney, Michael P. Douglas, John P. Macgregor, Jean G. Jordan, Leonard W. Mayer, Shadi M. Rassouli, Winfred Barchet, Cindy Munro, L. Shuttleworth, and Kathryn Bernard |
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J. Clin. Microbiol. 2003. 41: 1289-1294.
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Significant Improvement of the Recombinant Borrelia-Specific Immunoglobulin G Immunoblot Test by Addition of VlsE and a DbpA Homologue Derived from Borrelia garinii for Diagnosis of Early Neuroborreliosis |
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Ulrike Schulte-Spechtel, Gisela Lehnert, Gaby Liegl, Volker Fingerle, Christiane Heimerl, Barbara J. B. Johnson, and Bettina Wilske |
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J. Clin. Microbiol. 2003. 41: 1299-1303.
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Isolation of Sulfate-Reducing Bacteria from Human Thoracoabdominal Pus |
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Julien Loubinoux, Benoit Jaulhac, Yves Piemont, Henri Monteil, and Alain E. Le Faou |
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J. Clin. Microbiol. 2003. 41: 1304-1306.
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emm Gene Distribution among Erythromycin-Resistant and -Susceptible Italian Isolates of Streptococcus pyogenes |
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Claudia Zampaloni, Paola Cappelletti, Manuela Prenna, Luca Agostino Vitali, and Sandro Ripa |
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J. Clin. Microbiol. 2003. 41: 1307-1310.
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Age-Specific Helicobacter pylori Seropositivity Rates of Children in an Impoverished Urban Area of Northeast Brazil |
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Anastasia Mitchell, Terezinha M. J. Silva, Leah J. Barrett, Aldo A. M. Lima, and Richard L. Guerrant |
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J. Clin. Microbiol. 2003. 41: 1326-1328.
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Mycobacteriology and Aerobic Actinomycetes:
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Cost-Effectiveness Analysis of the Gen-Probe Amplified Mycobacterium Tuberculosis Direct Test as Used Routinely on Smear-Positive Respiratory Specimens |
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David W. Dowdy, Amelia Maters, Nicole Parrish, Christopher Beyrer, and Susan E. Dorman |
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J. Clin. Microbiol. 2003. 41: 948-953.
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Rapid Detection of rpoB Gene Mutations in Rifampin-Resistant Mycobacterium tuberculosis Isolates in Shanghai by Using the Amplification Refractory Mutation System |
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Xiao-Yong Fan, Zhong-Yi Hu, Fan-Hong Xu, Zhi-Qiang Yan, Sheng-Qi Guo, and Zhong-Ming Li |
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J. Clin. Microbiol. 2003. 41: 993-997.
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Conventional Methods versus 16S Ribosomal DNA Sequencing for Identification of Nontuberculous Mycobacteria: Cost Analysis |
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Victoria J. Cook, Christine Y. Turenne, Joyce Wolfe, Ryan Pauls, and Amin Kabani |
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J. Clin. Microbiol. 2003. 41: 1010-1015.
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Use of DNA Extracts from Ziehl-Neelsen-Stained Slides for Molecular Detection of Rifampin Resistance and Spoligotyping of Mycobacterium tuberculosis |
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A. G. M. Van Der Zanden, E. M. Te Koppele-Vije, N. Vijaya Bhanu, D. Van Soolingen, and L. M. Schouls |
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J. Clin. Microbiol. 2003. 41: 1101-1108.
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Susceptibility Testing with the Manual Mycobacteria Growth Indicator Tube (MGIT) and the MGIT 960 System Provides Rapid and Reliable Verification of Multidrug-Resistant Tuberculosis |
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Kati Ådjers-Koskela and Marja-Leena Katila |
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J. Clin. Microbiol. 2003. 41: 1235-1239.
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Clinical Implications of Mycobacterium kansasii Species Heterogeneity: Swiss National Survey |
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Caroline Taillard, Gilbert Greub, Rainer Weber, Gaby E. Pfyffer, Thomas Bodmer, Stefan Zimmerli, Reno Frei, Stefano Bassetti, Peter Rohner, Jean-Claude Piffaretti, Enos Bernasconi, Jacques Bille, Amalio Telenti, and Guy Prod'hom |
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J. Clin. Microbiol. 2003. 41: 1240-1244.
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Identification of Mycobacterial Species by PCR Sequencing of Quinolone Resistance-Determining Regions of DNA Gyrase Genes |
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Jean-Noël Dauendorffer, Isabelle Guillemin, Alexandra Aubry, Chantal Truffot-Pernot, Wladimir Sougakoff, Vincent Jarlier, and Emmanuelle Cambau |
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J. Clin. Microbiol. 2003. 41: 1311-1315.
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Prospective Clinical Evaluation of the Serologic Tuberculous Glycolipid Test in Combination with the Nucleic Acid Amplification Test |
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Ryoji Maekura, Hiroaki Kohno, Atsushi Hirotani, Yoshinari Okuda, Masami Ito, Takeshi Ogura, and Ikuya Yano |
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J. Clin. Microbiol. 2003. 41: 1322-1325.
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Mycology:
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Use of Fourier-Transform Infrared Spectroscopy for Typing of Candida albicans Strains Isolated in Intensive Care Units |
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C. Sandt, G. D. Sockalingum, D. Aubert, H. Lepan, C. Lepouse, M. Jaussaud, A. Leon, J. M. Pinon, M. Manfait, and D. Toubas |
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J. Clin. Microbiol. 2003. 41: 954-959.
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Evaluation of Etest Method for Determining Fluconazole and Voriconazole MICs for 279 Clinical Isolates of Candida Species Infrequently Isolated from Blood |
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M. J. Maxwell, S. A. Messer, R. J. Hollis, L. Boyken, S. Tendolkar, D. J. Diekema, and M. A. Pfaller |
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J. Clin. Microbiol. 2003. 41: 1087-1090.
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In Vitro Susceptibility Testing of Aspergillus spp.: Comparison of Etest and Reference Microdilution Methods for Determining Voriconazole and Itraconazole MICs |
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J. B. Pfaller, S. A. Messer, R. J. Hollis, D. J. Diekema, and M. A. Pfaller |
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J. Clin. Microbiol. 2003. 41: 1126-1129.
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Proficiency Testing Program for Clinical Laboratories Performing Antifungal Susceptibility Testing of Pathogenic Yeast Species |
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Rama Ramani and Vishnu Chaturvedi |
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J. Clin. Microbiol. 2003. 41: 1143-1146.
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Differentiation of Candida albicans and Candida dubliniensis by Using Recombinant Human Antibody Single-Chain Variable Fragments Specific for Hyphae |
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Joseph M. Bliss, Mark A. Sullivan, Jane Malone, and Constantine G. Haidaris |
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J. Clin. Microbiol. 2003. 41: 1152-1160.
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Genotypes at the Internal Transcribed Spacers of the Nuclear rRNA Operon of Pneumocystis jiroveci in Nonimmunosuppressed Infants without Severe Pneumonia |
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Anne Totet, Jean-Claude Pautard, Christian Raccurt, Patricia Roux, and Gilles Nevez |
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J. Clin. Microbiol. 2003. 41: 1173-1180.
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Casein Agar: a Useful Medium for Differentiating Candida dubliniensis from Candida albicans |
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Christian O. Mosca, María D. Moragues, José Llovo, Asmaa Al Mosaid, David C. Coleman, and José Pontón |
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J. Clin. Microbiol. 2003. 41: 1259-1262.
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Identification of Histoplasma capsulatum from Culture Extracts by Real-Time PCR |
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Jose Martagon-Villamil, Nabin Shrestha, Mary Sholtis, Carlos M. Isada, Gerri S. Hall, Terry Bryne, Barbara A. Lodge, L. Barth Reller, and Gary W. Procop |
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J. Clin. Microbiol. 2003. 41: 1295-1298.
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Virology:
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Competitive Enzyme-Linked Immunosorbent Assay Based on Monoclonal Antibody and Recombinant Hemagglutinin for Serosurveillance of Rinderpest Virus |
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G. J. Renukaradhya, K. B. Suresh, M. Rajasekhar, and M. S. Shaila |
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J. Clin. Microbiol. 2003. 41: 943-947.
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Performance Characteristics of Human Immunodeficiency Virus Type 1 (HIV-1) Genotyping Systems in Sequence-Based Analysis of Subtypes Other than HIV-1 Subtype B |
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Linda L. Jagodzinski, John D. Cooley, Mark Weber, and Nelson L. Michael |
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J. Clin. Microbiol. 2003. 41: 998-1003.
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p24 Antigen Detection Assay Modified with a Booster Step for Diagnosis and Monitoring of Human Immunodeficiency Virus Type 1 Infection |
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Ruengpung Sutthent, Narintorn Gaudart, Kulkanya Chokpaibulkit, Nattaya Tanliang, Chinda Kanoksinsombath, and Pongsakdi Chaisilwatana |
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J. Clin. Microbiol. 2003. 41: 1016-1022.
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Epitope-Blocking Enzyme-Linked Immunosorbent Assays for the Detection of Serum Antibodies to West Nile Virus in Multiple Avian Species |
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Bradley J. Blitvich, Nicole L. Marlenee, Roy A. Hall, Charles H. Calisher, Richard A. Bowen, John T. Roehrig, Nicholas Komar, Stanley A. Langevin, and Barry J. Beaty |
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J. Clin. Microbiol. 2003. 41: 1041-1047.
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International Proficiency Study of a Consensus L1 PCR Assay for the Detection and Typing of Human Papillomavirus DNA: Evaluation of Accuracy and Intralaboratory and Interlaboratory Agreement |
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Janet R. Kornegay, Michel Roger, Philip O. Davies, Amanda P. Shepard, Nayana A. Guerrero, Belen Lloveras, Darren Evans, and François Coutlée |
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J. Clin. Microbiol. 2003. 41: 1080-1086.
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Hepatitis C Virus Subtyping by a Core-Envelope 1-Based Reverse Transcriptase PCR Assay with Sequencing and Its Use in Determining Subtype Distribution among Danish Patients |
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Sylvie Corbet, Jens Bukh, Anja Heinsen, and Anders Fomsgaard |
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J. Clin. Microbiol. 2003. 41: 1091-1100.
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Community-Acquired Poliovirus Infection in Children with Primary Immunodeficiencies in Tunisia |
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Hinda Triki, Mohamed Ridha Barbouche, Olfa Bahri, Mohamed Bejaoui, and Koussay Dellagi |
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J. Clin. Microbiol. 2003. 41: 1203-1211.
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Changes in the Human Immunodeficiency Virus p7-p1-p6 gag Gene in Drug-Naive and Pretreated Patients |
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Oscar Gallego, Carmen de Mendoza, Angélica Corral, and Vincent Soriano |
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J. Clin. Microbiol. 2003. 41: 1245-1247.
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Entirely Automated Quantification of Human Immunodeficiency Virus Type 1 (HIV-1) RNA in Plasma by Using the Ultrasensitive COBAS AMPLICOR HIV-1 Monitor Test and RNA Purification on the MagNA Pure LC Instrument |
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Gabriele Hölzl, Markus Stöcher, Victoria Leb, Herbert Stekel, and Jörg Berg |
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J. Clin. Microbiol. 2003. 41: 1248-1251.
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Detection and Species-Level Identification of Primate Herpesviruses with a Comprehensive PCR Test for Human Herpesviruses |
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Grant Johnson, Daryl Dick, Melissa Ayers, Martin Petric, and Raymond Tellier |
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J. Clin. Microbiol. 2003. 41: 1256-1258.
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Hepatitis B Virus Genotype C Takes a More Aggressive Disease Course Than Hepatitis B Virus Genotype B in Hepatitis B e Antigen-Positive Patients |
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Henry Lik-Yuen Chan, May Ling Wong, Alex Yui Hui, Lawrence Cheung-Tsui Hung, Francis Ka-Leung Chan, and Joseph Jao-Yiu Sung |
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J. Clin. Microbiol. 2003. 41: 1277-1279.
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Molecular Characterization of Avian Paramyxovirus 1 Isolates Collected from Cormorants in Canada from 1995 to 2000 |
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H. M. Weingartl, J. Riva, and P. Kumthekar |
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J. Clin. Microbiol. 2003. 41: 1280-1284.
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Epidemiology:
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Epidemiologic Analysis of Invasive and Noninvasive Group A Streptococcal Isolates in Hong Kong |
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P. L. Ho, D. R. Johnson, A. W. Y. Yue, D. N. C. Tsang, T. L. Que, B. Beall, and E. L. Kaplan |
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J. Clin. Microbiol. 2003. 41: 937-942.
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Epidemiology of Tetracycline Resistance Determinants in Shigella spp. and Enteroinvasive Escherichia coli: Characterization and Dissemination of tet(A)-1 |
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Antoinette B. Hartman, Idongesit I. Essiet, Daniel W. Isenbarger, and Luther E. Lindler |
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J. Clin. Microbiol. 2003. 41: 1023-1032.
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Molecular Epidemiology of Pseudomonas aeruginosa Colonization in a Burn Unit: Persistence of a Multidrug-Resistant Clone and a Silver Sulfadiazine-Resistant Clone |
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Jean-Paul Pirnay, Daniel De Vos, Christel Cochez, Florence Bilocq, Jean Pirson, Marc Struelens, Luc Duinslaeger, Pierre Cornelis, Martin Zizi, and Alain Vanderkelen |
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J. Clin. Microbiol. 2003. 41: 1192-1202.
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Characterization of Monkey Enteropathogenic Escherichia coli (EPEC) and Human Typical and Atypical EPEC Serotype Isolates from Neotropical Nonhuman Primates |
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Vania M. Carvalho, Carlton L. Gyles, Kim Ziebell, Marcela A. Ribeiro, José L. Catão-Dias, Idércio L. Sinhorini, Jamile Otman, Rogéria Keller, Luiz R. Trabulsi, and Antônio F. Pestana de Castro |
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J. Clin. Microbiol. 2003. 41: 1225-1234.
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Genotypic and Phenotypic Characteristics of Corynebacterium diphtheriae Strains Isolated from Patients in Belarus during an Epidemic Period |
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Leonid Titov, Valentina Kolodkina, Alina Dronina, Francine Grimont, Patrick A. D. Grimont, Monique Lejay-Collin, Aruni de Zoysa, Constantin Andronescu, Angela Diaconescu, Byanca Marin, and Androulla Efstratiou |
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J. Clin. Microbiol. 2003. 41: 1285-1288.
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Stability of Allelic Frequencies and Distributions of Candida albicans Microsatellite Loci from U.S. Population-Based Surveillance Isolates |
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Timothy J. Lott, Ruth E. Fundyga, Mary E. Brandt, Lee H. Harrison, Andre N. Sofair, Rana A. Hajjeh, and David W. Warnock |
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J. Clin. Microbiol. 2003. 41: 1316-1321.
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