JCM -- Table of Contents (July 1 2005, 43 [7])

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Contents: July 2005, Volume 43, Issue 7

       Minireviews

       Parasitology

       Virology

       Bacteriology

       Epidemiology

       Mycobacteriology and Aerobic Actinomycetes

       Clinical Veterinary Microbiology

       Mycology

       Case Reports

       Letters To The Editor

       Errata

Other Issues

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Table of Contents

[Index by Author]

To see an article, click its [Full Text], [Abstract] or [PDF] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.

Minireviews:

Toward Standardization of Diagnostic PCR Testing of Fecal Samples: Lessons from the Detection of Salmonellae in Pigs
B. Malorny and J. Hoorfar
J. Clin. Microbiol. July 2005 43: 3033-3037;
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Parasitology:

Evaluation of PCR for Diagnosis of Indian Kala-Azar and Assessment of Cure
R. Maurya, R. K. Singh, B. Kumar, P. Salotra, M. Rai, and S. Sundar
J. Clin. Microbiol. July 2005 43: 3038-3041;
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Cysticercosis Immunodiagnosis Using 18- and 14-Kilodalton Proteins from Taenia crassiceps Cysticercus Antigens Obtained by Immunoaffinity Chromatography
Noeli Maria Espíndola, Alberto Hiroshi Iha, Irene Fernandes, Osvaldo Massaiti Takayanagui, Luís dos Ramos Machado, José Antônio Livramento, Antônio Augusto Mendes Maia, José Mauro Peralta, and Adelaide José Vaz
J. Clin. Microbiol. July 2005 43: 3178-3184;
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Detection of Balamuthia Mitochondrial 16S rRNA Gene DNA in Clinical Specimens by PCR
Shigeo Yagi, Gregory C. Booton, Govinda S. Visvesvara, and Frederick L. Schuster
J. Clin. Microbiol. July 2005 43: 3192-3197;
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Comparative Assessment of the Gelatin Particle Agglutination Test and an Enzyme-Linked Immunosorbent Assay for Diagnosis of Strongyloidiasis
J. Sithithaworn, P. Sithithaworn, T. Janrungsopa, K. Suvatanadecha, K. Ando, and M. R. Haswell-Elkins
J. Clin. Microbiol. July 2005 43: 3278-3282;
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Use of a Locked-Nucleic-Acid Oligomer in the Clamped-Probe Assay for Detection of a Minority Pfcrt K76T Mutant Population of Plasmodium falciparum
Alice Senescau, Antoine Berry, Françoise Benoit-Vical, Olfert Landt, Richard Fabre, Joël Lelièvre, Sophie Cassaing, and Jean-François Magnaval
J. Clin. Microbiol. July 2005 43: 3304-3308;
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Use of a Single Serum Sample for Diagnosis of Acute Toxoplasmosis in Pregnant Women and Other Adults
Cynthia Press, Jose G. Montoya, and Jack S. Remington
J. Clin. Microbiol. July 2005 43: 3481-3483;
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Virology:

Identification of Novel Human Hepatitis E Virus (HEV) Isolates and Determination of the Seroprevalence of HEV in Korea
Jeong-min Ahn, Sang-Gyun Kang, Deog-Yong Lee, Sung Jae Shin, and Han Sang Yoo
J. Clin. Microbiol. July 2005 43: 3042-3048;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Molecular Detection and Quantitative Analysis of the Entire Spectrum of Human Adenoviruses by a Two-Reaction Real-Time PCR Assay
K. Ebner, M. Suda, F. Watzinger, and T. Lion
J. Clin. Microbiol. July 2005 43: 3049-3053;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Differential Sensitivities of Severe Acute Respiratory Syndrome (SARS) Coronavirus Spike Polypeptide Enzyme-Linked Immunosorbent Assay (ELISA) and SARS Coronavirus Nucleocapsid Protein ELISA for Serodiagnosis of SARS Coronavirus Pneumonia
Patrick C. Y. Woo, Susanna K. P. Lau, Beatrice H. L. Wong, Hoi-wah Tsoi, Ami M. Y. Fung, Richard Y. T. Kao, Kwok-hung Chan, J. S. Malik Peiris, and Kwok-yung Yuen
J. Clin. Microbiol. July 2005 43: 3054-3058;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Diagnostic Value of Measuring Epstein-Barr Virus (EBV) DNA Load and Carcinoma-Specific Viral mRNA in Relation to Anti-EBV Immunoglobulin A (IgA) and IgG Antibody Levels in Blood of Nasopharyngeal Carcinoma Patients from Indonesia
Servi J. C. Stevens, Sandra A. W. M. Verkuijlen, Bambang Hariwiyanto, Harijadi, Jajah Fachiroh, Dewi K. Paramita, I. Bing Tan, Sophia M. Haryana, and Jaap M. Middeldorp
J. Clin. Microbiol. July 2005 43: 3066-3073;
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Genomic and Bioinformatics Analyses of HAdV-4vac and HAdV-7vac, Two Human Adenovirus (HAdV) Strains That Constituted Original Prophylaxis against HAdV-Related Acute Respiratory Disease, a Reemerging Epidemic Disease
Anjan Purkayastha, Jing Su, John McGraw, Susan E. Ditty, Ted L. Hadfield, Jason Seto, Kevin L. Russell, Clark Tibbetts, and Donald Seto
J. Clin. Microbiol. July 2005 43: 3083-3094;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Real-Time Nucleic Acid Sequence-Based Amplification Using Molecular Beacons for Detection of Enterovirus RNA in Clinical Specimens
Marie L. Landry, Robin Garner, and David Ferguson
J. Clin. Microbiol. July 2005 43: 3136-3139;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Applicability of Oral Fluid Collected onto Filter Paper for Detection and Genetic Characterization of Measles Virus Strains
Doris Chibo, Michaela A. Riddell, Mike G. Catton, and Chris J. Birch
J. Clin. Microbiol. July 2005 43: 3145-3149;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Purification and Characterization of Nipah Virus Nucleocapsid Protein Produced in Insect Cells
Majid Eshaghi, Wen Siang Tan, Swee Tin Ong, and Khatijah Yusoff
J. Clin. Microbiol. July 2005 43: 3172-3177;
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Characterization of a Novel P[25],G11 Human Group A Rotavirus
Mustafizur Rahman, Jelle Matthijnssens, Sharifun Nahar, Goutam Podder, David A. Sack, Tasnim Azim, and Marc Van Ranst
J. Clin. Microbiol. July 2005 43: 3208-3212;
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Comparative Analysis of Immunoglobulin M (IgM) Capture Enzyme-Linked Immunosorbent Assay Using Virus-Like Particles or Virus-Infected Mouse Brain Antigens To Detect IgM Antibody in Sera from Patients with Evident Flaviviral Infections
Derek A. Holmes, David E. Purdy, Day-Yu Chao, Amanda J. Noga, and Gwong-Jen J. Chang
J. Clin. Microbiol. July 2005 43: 3227-3236;
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Comparison between the Hybrid Capture II Test and a PCR-Based Human Papillomavirus Detection Method for Diagnosis and Posttreatment Follow-Up of Cervical Intraepithelial Neoplasia
Anna Söderlund-Strand, Per Rymark, Pia Andersson, Joakim Dillner, and Lena Dillner
J. Clin. Microbiol. July 2005 43: 3260-3266;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Flow Cytometry-Based Assay for Titrating Dengue Virus
C. R. Lambeth, L. J. White, R. E. Johnston, and A. M. de Silva
J. Clin. Microbiol. July 2005 43: 3267-3272;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Sensitive and Rapid Detection of Herpes Simplex Virus and Varicella-Zoster Virus DNA by Loop-Mediated Isothermal Amplification
Hisatoshi Kaneko, Tomohiro Iida, Koki Aoki, Shigeaki Ohno, and Tatsuo Suzutani
J. Clin. Microbiol. July 2005 43: 3290-3296;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Rapid Detection of Human Metapneumovirus Strains in Nasopharyngeal Aspirates and Shell Vial Cultures by Monoclonal Antibodies
Elena Percivalle, Antonella Sarasini, Livia Visai, M. Grazia Revello, and Giuseppe Gerna
J. Clin. Microbiol. July 2005 43: 3443-3446;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Evaluation of Real-Time Reverse Transcriptase PCR and Real-Time Loop-Mediated Amplification Assays for Severe Acute Respiratory Syndrome Coronavirus Detection
Leo L. M. Poon, Bonnie W. Y. Wong, Kwok H. Chan, Stella S. F. Ng, Kwok Y. Yuen, Yi Guan, and J. S. Malik Peiris
J. Clin. Microbiol. July 2005 43: 3457-3459;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Possible Tick-Borne Human Enterovirus Resulting in Aseptic Meningitis
Eric C. Freundt, Douglas C. Beatty, Teresa Stegall-Faulk, and Stephen M. Wright
J. Clin. Microbiol. July 2005 43: 3471-3473;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Frequent Detection of Epstein-Barr Virus and Cytomegalovirus but Not JC Virus DNA in Cerebrospinal Fluid Samples from Human Immunodeficiency Virus-Infected Patients in Northern Thailand
Archawin Rojanawiwat, Toshiyuki Miura, Hansa Thaisri, Panita Pathipvanich, Sittichai Umnajsirisuk, Tomohiko Koibuchi, Suthon Vongsheree, Aikichi Iwamoto, Koya Ariyoshi, and Pathom Sawanpanyalert
J. Clin. Microbiol. July 2005 43: 3484-3486;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Evaluation of the COBAS TaqMan 48 Real-Time PCR System for Quantitation of Hepatitis B Virus DNA
Rafael M. Gordillo, Juan Gutiérrez, and Manuel Casal
J. Clin. Microbiol. July 2005 43: 3504-3507;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Bacteriology:

Effect of pH and Antibiotics on Microbial Overgrowth in the Stomachs and Duodena of Patients Undergoing Percutaneous Endoscopic Gastrostomy Feeding
Graeme A. O'May, Nigel Reynolds, Aileen R. Smith, Aileen Kennedy, and George T. Macfarlane
J. Clin. Microbiol. July 2005 43: 3059-3065;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Detection and Typing of Integrons in Epidemic Strains of Acinetobacter baumannii Found in the United Kingdom
Jane F. Turton, Mary E. Kaufmann, Judith Glover, Juliana M. Coelho, Marina Warner, Rachel Pike, and Tyrone L. Pitt
J. Clin. Microbiol. July 2005 43: 3074-3082;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Comparison of Multiple-Locus Variable-Number Tandem-Repeat Analysis with Pulsed-Field Gel Electrophoresis, spa Typing, and Multilocus Sequence Typing for Clonal Characterization of Staphylococcus aureus Isolates
Natalia Malachowa, Artur Sabat, Marek Gniadkowski, Jolanta Krzyszton-Russjan, Joanna Empel, Jacek Miedzobrodzki, Klaudia Kosowska-Shick, Peter C. Appelbaum, and Waleria Hryniewicz
J. Clin. Microbiol. July 2005 43: 3095-3100;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

AmpC Disk Test for Detection of Plasmid-Mediated AmpC ß-Lactamases in Enterobacteriaceae Lacking Chromosomal AmpC ß-Lactamases
Jennifer A. Black, Ellen Smith Moland, and Kenneth S. Thomson
J. Clin. Microbiol. July 2005 43: 3110-3113;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Development of a Quantitative Real-Time PCR Assay for Detection of Mycoplasma genitalium
Helle Friis Svenstrup, Jørgen Skov Jensen, Eva Björnelius, Peter Lidbrink, Svend Birkelund, and Gunna Christiansen
J. Clin. Microbiol. July 2005 43: 3121-3128;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Detection of Pseudomonas aeruginosa Producing Metallo-ß-Lactamases in a Large Centralized Laboratory
Johann D. D. Pitout, Daniel B. Gregson, Laurent Poirel, Jo-Ann McClure, Phillip Le, and Deirdre L. Church
J. Clin. Microbiol. July 2005 43: 3129-3135;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Genetic Relatedness between Pneumococcal Populations Originating from the Nasopharynx, Adenoid, and Tympanic Cavity of Children with Otitis Media
Edith L. Tonnaer, Ger T. Rijkers, Jacques F. Meis, Corné H. Klaassen, Debby Bogaert, Peter W. Hermans, and Jo H. Curfs
J. Clin. Microbiol. July 2005 43: 3140-3144;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Drug Susceptibility Testing of Mycobacterium tuberculosis by a Nitrate Reductase Assay Applied Directly on Microscopy-Positive Sputum Samples
Humberto R. Musa, Marta Ambroggi, Alejandro Souto, and K. A. Kristian Ängeby
J. Clin. Microbiol. July 2005 43: 3159-3161;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Susceptibility of Neisseria meningitidis to 16 Antimicrobial Agents and Characterization of Resistance Mechanisms Affecting Some Agents
James H. Jorgensen, Sharon A. Crawford, and Kristin R. Fiebelkorn
J. Clin. Microbiol. July 2005 43: 3162-3171;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Genotyping of Methicillin-Resistant Staphylococcus aureus Strains from Two Hospitals in Bangalore, South India
Gayathri Arakere, Savitha Nadig, Göte Swedberg, Ragini Macaden, Satish K. Amarnath, and Dasarathy Raghunath
J. Clin. Microbiol. July 2005 43: 3198-3202;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Frequent Carriage of Panton-Valentine Leucocidin Genes by Staphylococcus aureus Isolates from Surgically Drained Abscesses
Bertrand Issartel, Anne Tristan, Sylvain Lechevallier, Franck Bruyère, Gerard Lina, Benoît Garin, Flore Lacassin, Michèle Bes, François Vandenesch, and Jerome Etienne
J. Clin. Microbiol. July 2005 43: 3203-3207;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Quantitative PCR Assay Using Sputum Samples for Rapid Diagnosis of Pneumococcal Pneumonia in Adult Emergency Department Patients
Samuel Yang, Shin Lin, Ambreen Khalil, Charlotte Gaydos, Eric Nuemberger, George Juan, Justin Hardick, John G. Bartlett, Paul G. Auwaerter, and Richard E. Rothman
J. Clin. Microbiol. July 2005 43: 3221-3226;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Ceftriaxone Resistance of Nontyphoidal Salmonella enterica Isolates in Northern Taiwan Attributable to Production of CTX-M-14 and CMY-2 ß-Lactamases
Wen-Chen Li, Fu-Yuan Huang, Chang-Pan Liu, Li-Chuan Weng, Nai-Yu Wang, Nan-Chang Chiu, and Chuen-Sheue Chiang
J. Clin. Microbiol. July 2005 43: 3237-3243;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Comparative Recovery of Microorganisms from BacT/ALERT Plastic and Glass FA and FN Blood Culture Bottles
J. A. Riley, B. J. Heiter, and P. P. Bourbeau
J. Clin. Microbiol. July 2005 43: 3244-3246;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Development and Evaluation of Chlamylege, a New Commercial Test Allowing Simultaneous Detection and Identification of Legionella, Chlamydophila pneumoniae, and Mycoplasma pneumoniae in Clinical Respiratory Specimens by Multiplex PCR
C. Ginevra, C. Barranger, A. Ros, O. Mory, J.-L. Stephan, F. Freymuth, M. Joannès, B. Pozzetto, and F. Grattard
J. Clin. Microbiol. July 2005 43: 3247-3254;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Suspension Microarray with Dendrimer Signal Amplification Allows Direct and High-Throughput Subtyping of Listeria monocytogenes from Genomic DNA
Monica K. Borucki, James Reynolds, Douglas R. Call, Todd J. Ward, Brent Page, and James Kadushin
J. Clin. Microbiol. July 2005 43: 3255-3259;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Enterobacter hormaechei subsp. oharae subsp. nov., E. hormaechei subsp. hormaechei comb. nov., and E. hormaechei subsp. steigerwaltii subsp. nov., Three New Subspecies of Clinical Importance
Harald Hoffmann, Sibylle Stindl, Wolfgang Ludwig, Anita Stumpf, Andre Mehlen, Daniel Monget, Denis Pierard, Stefan Ziesing, Jürgen Heesemann, Andreas Roggenkamp, and Karl H. Schleifer
J. Clin. Microbiol. July 2005 43: 3297-3303;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Uncultivated Phylotypes and Newly Named Species Associated with Primary and Persistent Endodontic Infections
J. F. Siqueira, Jr. and I. N. Rôças
J. Clin. Microbiol. July 2005 43: 3314-3319;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Identification of Two Distinct Hybridization Groups in the Genus Hafnia by 16S rRNA Gene Sequencing and Phenotypic Methods
J. Michael Janda, Sharon L. Abbott, Sue Bystrom, and Will S. Probert
J. Clin. Microbiol. July 2005 43: 3320-3323;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Genetic Divergence of Campylobacter fetus Strains of Mammal and Reptile Origins
Zheng-Chao Tu, William Eisner, Barry N. Kreiswirth, and Martin J. Blaser
J. Clin. Microbiol. July 2005 43: 3334-3340;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Use of an Automated Multiple-Locus, Variable-Number Tandem Repeat-Based Method for Rapid and High-Throughput Genotyping of Staphylococcus aureus Isolates
Patrice Francois, Antoine Huyghe, Yvan Charbonnier, Manuela Bento, Sébastien Herzig, Ivan Topolski, Bénédicte Fleury, Daniel Lew, Pierre Vaudaux, Stephan Harbarth, Willem van Leeuwen, Alex van Belkum, Dominique S. Blanc, Didier Pittet, and Jacques Schrenzel
J. Clin. Microbiol. July 2005 43: 3346-3355;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Differential Distribution and Expression of Panton-Valentine Leucocidin among Community-Acquired Methicillin-Resistant Staphylococcus aureus Strains
Battouli Saïd-Salim, Barun Mathema, Kevin Braughton, Stacy Davis, Daniel Sinsimer, William Eisner, Yekaterina Likhoshvay, Frank R. DeLeo, and Barry N. Kreiswirth
J. Clin. Microbiol. July 2005 43: 3373-3379;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Spatial Organization and Composition of the Mucosal Flora in Patients with Inflammatory Bowel Disease
Alexander Swidsinski, Jutta Weber, Vera Loening-Baucke, Laura P. Hale, and Herbert Lochs
J. Clin. Microbiol. July 2005 43: 3380-3389;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Rapid Diagnosis of Bacterial Meningitis by Real-Time PCR and Fluorescence In Situ Hybridization
Sven Poppert, Andreas Essig, Barbara Stoehr, Adelinde Steingruber, Beate Wirths, Stefan Juretschko, Udo Reischl, and Nele Wellinghausen
J. Clin. Microbiol. July 2005 43: 3390-3397;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Development of a Novel Protein Microarray Method for Serotyping Salmonella enterica Strains
H. Y. Cai, L. Lu, C. A. Muckle, J. F. Prescott, and S. Chen
J. Clin. Microbiol. July 2005 43: 3427-3430;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Prevalence of SCCmec Type IV in Nosocomial Bloodstream Isolates of Methicillin-Resistant Staphylococcus aureus
Priscila de A. Trindade, Renata L. Pacheco, Silvia F. Costa, Flavia Rossi, Antonio A. Barone, Elsa M. Mamizuka, and Anna S. Levin
J. Clin. Microbiol. July 2005 43: 3435-3437;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Sensitivity and Specificity of a Rapid rRNA Gene Probe Assay for Simultaneous Identification of Staphylococcus aureus and Detection of mecA
Shannon Kaplan, Elizabeth M. Marlowe, James J. Hogan, Mehmet Doymaz, David A. Bruckner, and Andrew E. Simor
J. Clin. Microbiol. July 2005 43: 3438-3442;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Human Clinical Isolates of Corynebacterium diphtheriae and Corynebacterium ulcerans Collected in Canada from 1999 to 2003 but Not Fitting Reporting Criteria for Cases of Diphtheria
Leanne M. DeWinter, Kathryn A. Bernard, and Marc G. Romney
J. Clin. Microbiol. July 2005 43: 3447-3449;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Comparison of Conventional Susceptibility Testing, Penicillin-Binding Protein 2a Latex Agglutination Testing, and mecA Real-Time PCR for Detection of Oxacillin Resistance in Staphylococcus aureus and Coagulase-Negative Staphylococcus
Melissa B. Miller, Heather Meyer, Elaine Rogers, and Peter H. Gilligan
J. Clin. Microbiol. July 2005 43: 3450-3452;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Repeated Occurrence of Diverse Extended-Spectrum ß-Lactamases in Minor Serotypes of Food-Borne Salmonella enterica subsp. enterica
L. Politi, P. T. Tassios, M. Lambiri, A. Kansouzidou, M. Pasiotou, A. C. Vatopoulos, K. Mellou, N. J. Legakis, and L. S. Tzouvelekis
J. Clin. Microbiol. July 2005 43: 3453-3456;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Use of PCR Analyses To Define the Distribution of Ralstonia Species Recovered from Patients with Cystic Fibrosis
Tom Coenye, Theodore Spilker, Rebecca Reik, Peter Vandamme, and John J. LiPuma
J. Clin. Microbiol. July 2005 43: 3463-3466;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Bacteriology of Acute and Chronic Ethmoid Sinusitis
Itzhak Brook
J. Clin. Microbiol. July 2005 43: 3479-3480;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Multiplex PCR for Identification of Seven Streptococcus pneumoniae Serotypes Targeted by a 7-Valent Conjugate Vaccine
Damien M. O'Halloran and Mary T. Cafferkey
J. Clin. Microbiol. July 2005 43: 3487-3490;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Molecular Evidence that Nasal Carriage of Staphylococcus aureus Plays a Role in Respiratory Tract Infections of Critically Ill Patients
Philippe Corne, Hélène Marchandin, Olivier Jonquet, Josiane Campos, and Anne-Laure Bañuls
J. Clin. Microbiol. July 2005 43: 3491-3493;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Evaluation of seaFAST, a Rapid Fluorescent In Situ Hybridization Test, for Detection of Helicobacter pylori and Resistance to Clarithromycin in Paraffin-Embedded Biopsy Sections
Julie M. Morris, Alisa L. Reasonover, Michael G. Bruce, Dana L. Bruden, Brian J. McMahon, Frank D. Sacco, Douglas E. Berg, and Alan J. Parkinson
J. Clin. Microbiol. July 2005 43: 3494-3496;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Identification of Unique Bacterial Gene Segments from Streptococcus mutans with Potential Relevance to Dental Caries by Subtraction DNA Hybridization
Deepak Saxena, Yihong Li, and Page W. Caufield
J. Clin. Microbiol. July 2005 43: 3508-3511;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

First Infection with VanD-Type Glycopeptide-Resistant Enterococcus faecium in Europe
Jean-Philippe Lavigne, Hélène Marchandin, Nicole Bouziges, and Albert Sotto
J. Clin. Microbiol. July 2005 43: 3512-3515;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Detection of Tropheryma whipplei DNA in Clinical Specimens by LightCycler Real-Time PCR
Lynne M. Sloan, Jon E. Rosenblatt, and Franklin R. Cockerill, III
J. Clin. Microbiol. July 2005 43: 3516-3518;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Nosocomial Outbreak of Pediatric Gastroenteritis Caused by CTX-M-14-Type Extended-Spectrum ß-Lactamase-Producing Strains of Salmonella enterica Serovar London
Dongeun Yong, Young Sik Lim, Jong Hwa Yum, Hyukmin Lee, Kyungwon Lee, Eui-Chong Kim, Bok-Kwon Lee, and Yunsop Chong
J. Clin. Microbiol. July 2005 43: 3519-3521;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Description of Kingella potus sp. nov., an Organism Isolated from a Wound Caused by an Animal Bite
Paul A. Lawson, Henry Malnick, Matthew D. Collins, Jayesh J. Shah, Marie A. Chattaway, Richard Bendall, and John W. Hartley
J. Clin. Microbiol. July 2005 43: 3526-3529;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Identification of Vibrio parahaemolyticus Pandemic Group-Specific DNA Sequence by Genomic Subtraction
Masatoshi Okura, Ro Osawa, Eiji Arakawa, Jun Terajima, and Haruo Watanabe
J. Clin. Microbiol. July 2005 43: 3533-3536;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Epidemiology:

Variations in emm Type among Group A Streptococcal Isolates Causing Invasive or Noninvasive Infections in a Nationwide Study
Kim Ekelund, Jessica Darenberg, Anna Norrby-Teglund, Steen Hoffmann, Didi Bang, Peter Skinhøj, and Helle Bossen Konradsen
J. Clin. Microbiol. July 2005 43: 3101-3109;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Extended-Spectrum-ß-Lactamase-Producing Enterobacteriaceae in Yaounde, Cameroon
Joseph Gangoué-Piéboji, Branka Bedenic, Sinata Koulla-Shiro, Corinne Randegger, Dieudonné Adiogo, Pierre Ngassam, Peter Ndumbe, and Herbert Hächler
J. Clin. Microbiol. July 2005 43: 3273-3277;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Characterization of Vancomycin-Resistant Enterococcus faecium Isolates from Broiler Poultry and Pig Farms in England and Wales
L. Garcia-Migura, E. Pleydell, S. Barnes, R. H. Davies, and E. Liebana
J. Clin. Microbiol. July 2005 43: 3283-3289;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Countrywide Spread of Community- and Hospital-Acquired Extended-Spectrum ß-Lactamase (CTX-M-15)-Producing Enterobacteriaceae in Lebanon
Carole Moubareck, Ziad Daoud, Noha I. Hakimé, Monzer Hamzé, Nicole Mangeney, Hiam Matta, Jacques E. Mokhbat, Raymond Rohban, Dolla Karam Sarkis, and Florence Doucet-Populaire
J. Clin. Microbiol. July 2005 43: 3309-3313;
[Abstract] [Full Text] [PDF] [Reprints and Permissions]

Emergence of Virulent Methicillin-Resistant Staphylococcus aureus Strains Carrying Panton-Valentine Leucocidin Genes in The Netherlands
W. J. B. Wannet, E. Spalburg, M. E. O. C. Heck, G. N. Pluister, E. Tiemersma, R. J. L. Willems, X. W. Huijsdens, A. J. de Neeling, and J. Etienne
J. Clin. Microbiol. July 2005 43: 3341-3345;
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A Panton-Valentine Leucocidin (PVL)-Positive Community-Acquired Methicillin-Resistant Staphylococcus aureus (MRSA) Strain, Another Such Strain Carrying a Multiple-Drug Resistance Plasmid, and Other More-Typical PVL-Negative MRSA Strains Found in Japan
Yoko Takizawa, Ikue Taneike, Saori Nakagawa, Tomohiro Oishi, Yoshiyuki Nitahara, Nobuhiro Iwakura, Kyoko Ozaki, Misao Takano, Teruko Nakayama, and Tatsuo Yamamoto
J. Clin. Microbiol. July 2005 43: 3356-3363;
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Dissemination of Methicillin-Resistant Staphylococci among Healthy Japanese Children
Ken Hisata, Kyoko Kuwahara-Arai, Munetaka Yamanoto, Teruyo Ito, Yasuo Nakatomi, Longzhu Cui, Tadashi Baba, Masahiko Terasawa, Chie Sotozono, Shigeru Kinoshita, Yuichiro Yamashiro, and Keiichi Hiramatsu
J. Clin. Microbiol. July 2005 43: 3364-3372;
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Molecular Diversity of Bacillus anthracis in Italy
Antonio Fasanella, Matthew Van Ert, Settimia A. Altamura, Giuliano Garofolo, Canio Buonavoglia, Guido Leori, Lynn Huynh, Shaylan Zanecki, and Paul Keim
J. Clin. Microbiol. July 2005 43: 3398-3401;
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Mycobacteriology and Aerobic Actinomycetes:

Drug Resistance Evolution of a Mycobacterium tuberculosis Strain from a Noncompliant Patient
Francesca Meacci, Germano Orrù, Elisabetta Iona, Federico Giannoni, Claudio Piersimoni, Gianni Pozzi, Lanfranco Fattorini, and Marco R. Oggioni
J. Clin. Microbiol. July 2005 43: 3114-3120;
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Clinical and Prognostic Importance of Serotyping Mycobacterium avium-Mycobacterium intracellulare Complex Isolates in Human Immunodeficiency Virus-Negative Patients
Ryoji Maekura, Yoshinari Okuda, Atsusi Hirotani, Seigo Kitada, Touru Hiraga, Kenji Yoshimura, Ikuya Yano, Kazuo Kobayashi, and Masami Ito
J. Clin. Microbiol. July 2005 43: 3150-3158;
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Genomic Deletions Classify the Beijing/W Strains as a Distinct Genetic Lineage of Mycobacterium tuberculosis
Anthony G. Tsolaki, Sebastien Gagneux, Alexander S. Pym, Yves-Olivier L. Goguet de la Salmoniere, Barry N. Kreiswirth, Dick Van Soolingen, and Peter M. Small
J. Clin. Microbiol. July 2005 43: 3185-3191;
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Improved Sensitivity of Sputum Smear Microscopy after Processing Specimens with C₁₈-Carboxypropylbetaine To Detect Acid-Fast Bacilli: a Study of United States-Bound Immigrants from Vietnam
K. F. Laserson, N. T. N. Yen, C. G. Thornton, V. T. C. Mai, W. Jones, D. Q. An, N. H. Phuoc, N. A. Trinh, D. T. C. Nhung, T. X. Lien, N. T. N. Lan, C. Wells, N. Binkin, M. Cetron, and S. A. Maloney
J. Clin. Microbiol. July 2005 43: 3460-3462;
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Age-Related Prevalence and Distribution of Nontuberculous Mycobacterial Species among Patients with Cystic Fibrosis
Catherine Pierre-Audigier, Agnès Ferroni, Isabelle Sermet-Gaudelus, Muriel Le Bourgeois, Catherine Offredo, Hoang Vu-Thien, Brigitte Fauroux, Patricia Mariani, Anne Munck, Edouard Bingen, Didier Guillemot, Gilles Quesne, Véronique Vincent, Patrick Berche, and Jean-Louis Gaillard
J. Clin. Microbiol. July 2005 43: 3467-3470;
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Interpretive Criteria for Use of AccuProbe for Identification of Mycobacterium avium Complex Directly from 7H9 Broth Cultures
Joann L. Cloud, Karen C. Carroll, Samuel Cohen, Clint M. Anderson, and Gail L. Woods
J. Clin. Microbiol. July 2005 43: 3474-3478;
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Intra- and Interpatient Variability of the hsp65 and 16S-23S Intergenic Gene Region in Mycobacterium abscessus Strains from Patients with Cystic Fibrosis
Brigitte König, Ina Tammer, Veronika Sollich, and Wolfgang König
J. Clin. Microbiol. July 2005 43: 3500-3503;
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Does Resistance to Pyrazinamide Accurately Indicate the Presence of Mycobacterium bovis?
Bouke C. de Jong, Anthony Onipede, Alex S. Pym, Sebastien Gagneux, Roxanne S. Aga, Kathryn DeRiemer, and Peter M. Small
J. Clin. Microbiol. July 2005 43: 3530-3532;
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Clinical Veterinary Microbiology:

Characterization of a Shiga Toxin-, Intimin-, and Enterotoxin Hemolysin-Producing Escherichia coli ONT:H25 Strain Commonly Isolated from Healthy Cattle
Haiqing Sheng, Margaret A. Davis, Hannah J. Knecht, Dale D. Hancock, Joyce Van Donkersgoed, and Carolyn J. Hovde
J. Clin. Microbiol. July 2005 43: 3213-3220;
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Characterization of a New Species of Adenovirus in Falcons
Mark Schrenzel, J. Lindsay Oaks, Dave Rotstein, Gabriel Maalouf, Eric Snook, Cal Sandfort, and Bruce Rideout
J. Clin. Microbiol. July 2005 43: 3402-3413;
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Isolation and Epidemiology of Falcon Adenovirus
J. Lindsay Oaks, Mark Schrenzel, Bruce Rideout, and Cal Sandfort
J. Clin. Microbiol. July 2005 43: 3414-3420;
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Potential Secondary Pathogenic Role for Bovine Herpesvirus 4
Gaetano Donofrio, Sandro Cavirani, Vicky van Santen, and Cesidio Filippo Flammini
J. Clin. Microbiol. July 2005 43: 3421-3426;
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Clinical Use of 16S rRNA Gene Sequencing To Identify Mycoplasma felis and M. gateae Associated with Feline Ulcerative Keratitis
Larry D. Gray, Kerry L. Ketring, and Yi-Wei Tang
J. Clin. Microbiol. July 2005 43: 3431-3434;
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Isolation of an Atypical Strain of Actinobacillus pleuropneumoniae Serotype 1 with a Truncated Lipopolysaccharide Outer Core and No O-Antigen
Mario Jacques, Josée Labrie, Frank St. Michael, Andrew D. Cox, Marie-Anne Paradis, C. Paul Dick, Christian Klopfenstein, André Broes, Nahuel Fittipaldi, and Marcelo Gottschalk
J. Clin. Microbiol. July 2005 43: 3522-3525;
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Mycology:

Multilocus DNA Sequence Comparisons Rapidly Identify Pathogenic Molds
Jennifer L. Rakeman, Uyen Bui, Karen LaFe, Yi-Ching Chen, Rhonda J. Honeycutt, and Brad T. Cookson
J. Clin. Microbiol. July 2005 43: 3324-3333;
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Disk Diffusion Testing Using Candida sp. Colonies Taken Directly from CHROMagar Candida Medium May Decrease Time Required To Obtain Results
Michael Klevay, Alex Ebinger, Daniel Diekema, Shawn Messer, Richard Hollis, and Michael Pfaller
J. Clin. Microbiol. July 2005 43: 3497-3499;
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Case Reports:

Bacteremia Caused by Janibacter melonis
Sameer Elsayed and Kunyan Zhang
J. Clin. Microbiol. July 2005 43: 3537-3539;
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High Fatality Rate of Epstein-Barr Virus-Associated Lymphoproliferative Disorder Occurring after Bone Marrow Transplantation with Rabbit Antithymocyte Globulin Conditioning Regimens
E. Peres, S. Savasan, J. Klein, M. Abidi, R. Dansey, and E. Abella
J. Clin. Microbiol. July 2005 43: 3540-3543;
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Toxoplasmosis after Renal Transplantation: Implications of a Missed Diagnosis
M. W. H. Wulf, R. van Crevel, R. Portier, C. G. ter Meulen, W. J. G. Melchers, A. van der Ven, and J. M. D. Galama
J. Clin. Microbiol. July 2005 43: 3544-3547;
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First Case of Human Cryptococcosis Due to Cryptococcus neoformans var. gattii in Spain
M. Francisca Colom, Susana Frasés, Consuelo Ferrer, Alejandro Jover, Mariano Andreu, Sergio Reus, Manuel Sánchez, and Josep M. Torres-Rodríguez
J. Clin. Microbiol. July 2005 43: 3548-3550;
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Fatal Reactivation of Postnatal Cytomegalovirus Infection with Rapid Emergence of Ganciclovir Resistance in an Infant after Allogeneic Stem Cell Transplantation
Sebastian Voigt, Detlef Michel, Olivia Kershaw, Jörn-Sven Kühl, Thomas Mertens, Wolfram Ebell, and Helga Meisel
J. Clin. Microbiol. July 2005 43: 3551-3554;
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Transmission of Mycobacterium tuberculosis from Human to Cattle
Matjaz Ocepek, Mateja Pate, Manca Zolnir-Dovc, and Mario Poljak
J. Clin. Microbiol. July 2005 43: 3555-3557;
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Simultaneous Detection of "Rickettsia mongolotimonae" in a Patient and in a Tick in Greece
Anna Psaroulaki, Antonis Germanakis, Achilleas Gikas, Efstathia Scoulica, and Yannis Tselentis
J. Clin. Microbiol. July 2005 43: 3558-3559;
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Discordant Rise in Galactomannan Antigenemia in a Patient with Resolving Aspergillosis, Renal Failure, and Ongoing Hemodialysis
Chadi M. El Saleeby, Kim J. Allison, Katherine M. Knapp, Thomas J. Walsh, and Randall T. Hayden
J. Clin. Microbiol. July 2005 43: 3560-3563;
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Bacteremia Caused by an Undescribed Species of Janibacter
Julien Loubinoux, Bernard Rio, Liliana Mihaila, Elena Foïs, Anne Le Fleche, Patrick A. D. Grimont, Jean-Pierre Marie, and Anne Bouvet
J. Clin. Microbiol. July 2005 43: 3564-3566;
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Isolation of Actinobaculum schaalii and Actinobaculum urinale from a Patient with Chronic Renal Failure
Faiz Fendukly and Björn Osterman
J. Clin. Microbiol. July 2005 43: 3567-3569;
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Involvement of Streptococcal Mitogenic Exotoxin Z in Streptococcal Toxic Shock Syndrome
Lily Yang, Mark Thomas, Andrew Woodhouse, Diana Martin, John D. Fraser, and Thomas Proft
J. Clin. Microbiol. July 2005 43: 3570-3573;
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Letters To The Editor:

Inhibition of Growth of Streptococcus mutans, Methicillin-Resistant Staphylococcus aureus, and Vancomycin-Resistant Enterococci by Kurarinone, a Bioactive Flavonoid Isolated from Sophora flavescens
Li Chen, Xiaofang Cheng, Wenyuan Shi, Qingyi Lu, Vay Liang Go, David Heber, and Lili Ma
J. Clin. Microbiol. July 2005 43: 3574-3575;
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Primer Sequence Modification Enhances Hepatitis C Virus Genotype Coverage
Yi-Wei Tang, Susan E. Sefers, and Haijing Li
J. Clin. Microbiol. July 2005 43: 3576-3577;
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Meningitis Due to Vancomycin-Resistant Enterococcus faecium Successfully Treated with Combined Intravenous and Intraventricular Chloramphenicol
Pablo Gustavo Scapellato, Cecilia Ormazabal, José Luis Scapellato, and Edgardo Gabriel Bottaro
J. Clin. Microbiol. July 2005 43: 3578-3579;
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Detection of Acid-Fast Bacilli in Postlysis Debris of Clinical Specimens Improves the Reliability of PCR
Sagarika Haldar, Shyamasree De Majumdar, Soumitesh Chakravorty, Jaya Sivaswami Tyagi, Manpreet Bhalla, and M. K. Sen
J. Clin. Microbiol. July 2005 43: 3580-3581;
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Enterotoxigenic Escherichia coli Isolated from Surface Water in Urban and Rural Areas of Bangladesh
Yasmin A. Begum, Kaisar A. Talukder, G. Balakrish Nair, Firdausi Qadri, R. Bradley Sack, and Ann-Mari Svennerholm
J. Clin. Microbiol. July 2005 43: 3582-3583;
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Molecular Mycological Diagnosis and Correct Antimycotic Treatments
Nicasio Mancini, Cristina M. Ossi, Mario Perotti, Massimo Clementi, Daniel B. DiGiulio, Joanna M. Schaenman, Jose G. Montoya, Nancy B. McClenny, Gerald J. Berry, Laurence F. Mirels, Michael G. Rinaldi, and Annette W. Fothergill
J. Clin. Microbiol. July 2005 43: 3584-3585;
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Errata:

Comparing Genomes of Helicobacter pylori Strains from the High-Altitude Desert of Ladakh, India
Farhana Kauser, M. Abid Hussain, Irshad Ahmed, Naheed Ahmad, Aejaz Habeeb, Aleem A. Khan, and Niyaz Ahmed
J. Clin. Microbiol. July 2005 43: 3586
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Stochastic Transmission of Multiple Genotypically Distinct Anaplasma marginale Strains in a Herd with High Prevalence of Anaplasma Infection
Guy H. Palmer, Donald P. Knowles, Jr, Jose-Luis Rodriguez, David P. Gnad, Larry C. Hollis, Twig Marston, and Kelly A. Brayton
J. Clin. Microbiol. July 2005 43: 3587
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Comparison of Real-Time PCR, Conventional PCR, and Galactomannan Antigen Detection by Enzyme-Linked Immunosorbent Assay Using Bronchoalveolar Lavage Fluid Samples from Hematology Patients for Diagnosis of Invasive Pulmonary Aspergillosis
Maurizio Sanguinetti, Brunella Posteraro, Livio Pagano, Gabriella Pagliari, Luana Fianchi, Luca Mele, Marilena La Sorda, Angelica Franco, and Giovanni Fadda
J. Clin. Microbiol. July 2005 43: 3588
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The pls Gene Found in Methicillin-Resistant Staphylococcus aureus Strains Is Common in Clinical Isolates of Staphylococcus sciuri
Katri Juuti, Salha Ibrahem, Anni Virolainen-Julkunen, Jaana Vuopio-Varkila, and Pentti Kuusela
J. Clin. Microbiol. July 2005 43: 3589
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Efficient Discrimination within a Corynebacterium diphtheriae Epidemic Clonal Group by a Novel Macroarray-Based Method (print version)
Igor Mokrousov, Olga Narvskaya, Elena Limeschenko, and Anna Vyazovaya
J. Clin. Microbiol. July 2005 43: 3590
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Systemic Disease in Vaal Rhebok (Pelea capreolus) Caused by Mycoplasmas in the Mycoides Cluster
Melissa M. Nicolas, Ilse H. Stalis, Tracy L. Clippinger, Martin Busch, Robert Nordhausen, Gabriel Maalouf, and Mark D. Schrenzel
J. Clin. Microbiol. July 2005 43: 3591
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Volume 42, no. 7, 2004, Legend to Cover Photograph

J. Clin. Microbiol. July 2005 43: 3592
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Amplicon Sequencing and Improved Detection of Human Rhinovirus in Respiratory Samples
Christelle Deffernez, Werner Wunderli, Yves Thomas, Sabine Yerly, Luc Perrin, and Laurent Kaiser
J. Clin. Microbiol. July 2005 43: 3593
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Endemic, Epidemic Clone of Salmonella enterica Serovar Typhi Harboring a Single Multidrug-Resistant Plasmid in Vietnam between 1995 and 2002
Thi Anh Hong Le, Monique Lejay-Collin, Patrick A. D. Grimont, Thuy Long Hoang, Thi Vinh Hguyen, Francine Grimont, and Maurice R. Scavizzi
J. Clin. Microbiol. July 2005 43: 3594
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