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Bacteriology

Identification of Bartonella Species Directly in Clinical Specimens by PCR-Restriction Fragment Length Polymorphism Analysis of a 16S rRNA Gene Fragment

Ghassan M. Matar, Jane E. Koehler, Georgia Malcolm, Mary Ann Lambert-Fair, Jordan Tappero, Suzan B. Hunter, Bala Swaminathan
Ghassan M. Matar
Department of Microbiology and Immunology, American University of Beirut, Beirut, Lebanon;
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Jane E. Koehler
Department of Medicine, Division of Infectious Diseases, University of California at San Francisco, San Francisco, California; and
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Georgia Malcolm
Division of Bacterial Diseases, National Center for Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia
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Mary Ann Lambert-Fair
Division of Bacterial Diseases, National Center for Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia
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Jordan Tappero
Department of Medicine, Division of Infectious Diseases, University of California at San Francisco, San Francisco, California; and
Division of Bacterial Diseases, National Center for Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia
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Suzan B. Hunter
Division of Bacterial Diseases, National Center for Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia
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Bala Swaminathan
Division of Bacterial Diseases, National Center for Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia
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DOI: 10.1128/JCM.37.12.4045-4047.1999
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    Fig. 1.

    PCR-RFLP of B. henselae, B. vinsonii, B. elizabethae, and B. quintana. Lane 1, 50-bp ladder; lanes 2 to 4, B. henselae B91-002000; lanes 5 to 7, B. vinsonii B92-010225; lanes 8 to 10,B. elizabethae B92-002005; lanes 11 to 13, B. quintana ATCC VR-358; lane 14, 50-bp ladder. PCR products were uncut (lanes 2, 5, 8, and 11) or cut with DdeI (lanes 3, 6, 9, and 12) or MseI (lanes 4, 7, 10, and 13).

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    Fig. 2.

    PCR-RFLP of B. quintana and B. henselae from clinical specimens. Lane 1, 50-bp ladder, lanes 2 to 4, B. quintana H93-176; lanes 5 to 7, B. henselaeB92-007003; lane 8, blank; lanes 9 to 11, B. quintanaB93-007356; lane 12, 50-bp ladder. PCR products were left uncut (lanes 2, 5, and 9) or were cut with DdeI (lanes 3, 6, and 10) orMseI (lanes 4, 7, and 11).

Tables

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  • Table 1.

    Identification of Bartonella species by PCR-RFLP analysis of a 16S rDNA fragment

    Bartonellasp.DdeIMseIPCR-RFLP composite pattern
    Lengths of fragmentsa (bp)No. of restriction sitesLength of fragments (bp)No. of restriction sites
    OPOP
    B. henselae190, 115187, 1091214, 81217, 791I
    B. vinsonii158, 114159, 109, 282218, 82217, 792II
    B. elizabethae154, 110159, 109, 282166, 79, 52173, 79, 442III
    B. quintana180, 106187, 1091168, 75, 47173, 79, 442IV
    • ↵a O, observed; P, predicted (GenBank sequences).

  • Table 2.

    Distribution of Bartonella species among clinical diagnostic specimens evaluated

    SpeciesNo. of specimensTissueClinical diagnosis
    B. henselae21Lymph nodeCSD
    SkinBAa
    BloodBacteremia
    B. quintana4SkinBA
    BoneBA
    • ↵a BA, bacillary angiomatosis.

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Identification of Bartonella Species Directly in Clinical Specimens by PCR-Restriction Fragment Length Polymorphism Analysis of a 16S rRNA Gene Fragment
Ghassan M. Matar, Jane E. Koehler, Georgia Malcolm, Mary Ann Lambert-Fair, Jordan Tappero, Suzan B. Hunter, Bala Swaminathan
Journal of Clinical Microbiology Dec 1999, 37 (12) 4045-4047; DOI: 10.1128/JCM.37.12.4045-4047.1999

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Identification of Bartonella Species Directly in Clinical Specimens by PCR-Restriction Fragment Length Polymorphism Analysis of a 16S rRNA Gene Fragment
Ghassan M. Matar, Jane E. Koehler, Georgia Malcolm, Mary Ann Lambert-Fair, Jordan Tappero, Suzan B. Hunter, Bala Swaminathan
Journal of Clinical Microbiology Dec 1999, 37 (12) 4045-4047; DOI: 10.1128/JCM.37.12.4045-4047.1999
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KEYWORDS

Bartonella
Bartonella Infections
polymerase chain reaction
Polymorphism, Restriction Fragment Length

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