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Table of Contents

November 1, 2001; Volume 39,Issue 11

Parasitology

  • Parasitology
    TaqMan-Based Detection of Trichomonas vaginalis DNA from Female Genital Specimens
    Jeanne A. Jordan, Donna Lowery, Massimo Trucco

Epidemiology

  • Epidemiology
    Genome Sequence-Based Fluorescent Amplified Fragment Length Polymorphism of Campylobacter jejuni, Its Relationship to Serotyping, and Its Implications for Epidemiological Analysis
    Meeta Desai, Julie M. J. Logan, Jennifer A. Frost, John Stanley
  • Epidemiology
    Heterogeneity of Pseudomonas aeruginosa in Brazilian Cystic Fibrosis Patients
    Suzane Silbert, Afonso Luis Barth, Hélio S. Sader
  • Epidemiology
    Pulsed-Field Gel Electrophoresis in Differentiation of Erysipelothrix Species Strains
    Alexandre Tomomitsu Okatani, Takehiko Uto, Takahide Taniguchi, Tomoko Horisaka, Tetsuya Horikita, Ken-Ichi Kaneko, Hideki Hayashidani
  • Epidemiology
    Bacterial Genetic Fingerprint: a Reliable Factor in the Study of the Epidemiology of HumanCampylobacter Enteritis?
    B. Steinbrueckner, F. Ruberg, M. Kist
  • Epidemiology
    Comparison of Automated Ribotyping to Pulsed-Field Gel Electrophoresis for Genetic Fingerprinting ofStreptococcus pneumoniae
    John M. Quale, David Landman, Carlos Flores, Jayashree Ravishankar

Mycology

  • Mycology
    Characterization of AFMP1: a Novel Target for Serodiagnosis of Aspergillosis
    Kwok-Yung Yuen, Che-Man Chan, King-Man Chan, Patrick C. Y. Woo, Xiao-Yan Che, Andy S. P. Leung, Liang Cao
  • Mycology
    Pneumocystis carinii f. sp. hominisDNA in Immunocompetent Health Care Workers in Contact with Patients with P. carinii Pneumonia
    Robert F. Miller, Helen E. Ambrose, Ann E. Wakefield
  • Mycology
    Origin of Cryptococcus neoformans var.neoformans Diploid Strains
    Massimo Cogliati, Maria C. Esposto, David L. Clarke, Brian L. Wickes, Maria A. Viviani
  • Mycology
    Alternative Identification Test Relying upon Sexual Reproductive Abilities of Candidalusitaniae Strains Isolated from Hospitalized Patients
    Fabienne François, Thierry Noël, Régis Pépin, Annie Brulfert, Christiane Chastin, Anne Favel, Jean Villard
  • Mycology
    Evaluation of Etest Method for Determining Posaconazole MICs for 314 Clinical Isolates ofCandida Species
    M. A. Pfaller, S. A. Messer, K. Mills, A. Bolmström, R. N. Jones
  • Mycology
    Polymorphic Internal Transcribed Spacer Region 1 DNA Sequences Identify Medically Important Yeasts
    Yi-Ching Chen, Jessica D. Eisner, Mireille M. Kattar, Sara L. Rassoulian-Barrett, Karen Lafe, Uyen Bui, Ajit P. Limaye, Brad T. Cookson
  • Mycology
    PCR Fingerprinting of Candida albicans Associated with Chronic Hyperplastic Candidosis and Other Oral Conditions
    Kerry L. Bartie, David W. Williams, Melanie J. Wilson, A. John C. Potts, Michael A. O. Lewis
  • Mycology
    Analysis of Microsatellite Markers ofCandida albicans Used for Rapid Typing
    Françoise Botterel, Christophe Desterke, Catherine Costa, Stéphane Bretagne
  • Mycology
    Differentiation of Candida albicans and Candida dubliniensis by Fluorescent In Situ Hybridization with Peptide Nucleic Acid Probes
    Kenneth Oliveira, Gerhard Haase, Cletus Kurtzman, Jens Jo/rgen Hyldig-Nielsen, Henrik Stender
  • Mycology
    Trends in Antifungal Susceptibility among SwedishCandida Species Bloodstream Isolates from 1994 to 1998: Comparison of the E-test and the Sensititre YeastOne Colorimetric Antifungal Panel with the NCCLS M27-A Reference Method
    Erja Chryssanthou
  • Mycology
    In Vitro Activity of Posaconazole against Clinical Isolates of Dermatophytes
    Francesco Barchiesi, Daniela Arzeni, Valeria Camiletti, Oriana Simonetti, Andreina Cellini, Anna M. Offidani, Giorgio Scalise

Chlamydiology and Rickettsiology

  • Chlamydiology and Rickettsiology
    Effect of Endocervical Specimen Adequacy on Ligase Chain Reaction Detection of Chlamydia trachomatis
    Mike J. Loeffelholz, Sandra J. Jirsa, Rebecca K. Teske, Juliet N. Woods
  • Chlamydiology and Rickettsiology
    Identification of a p28 Gene in Ehrlichia ewingii: Evaluation of Gene for Use as a Target for a Species-Specific PCR Diagnostic Assay
    Asiya A. Gusa, Richard S. Buller, Gregory A. Storch, Mark M. Huycke, Linda J. Machado, Leonard N. Slater, Steven L. Stockham, Robert F. Massung
  • Chlamydiology and Rickettsiology
    Characterization of Chlamydia trachomatis omp1 Genotypes among Sexually Transmitted Disease Patients in Sweden
    Margaretha Jurstrand, Lars Falk, Hans Fredlund, Margret Lindberg, Per Olcén, Sören Andersson, Kenneth Persson, Jan Albert, Anders Bäckman
  • Chlamydiology and Rickettsiology
    Relative Accuracy of Nucleic Acid Amplification Tests and Culture in Detecting Chlamydia in Asymptomatic Men
    Hong Cheng, Maurizio Macaluso, Sten H. Vermund, Edward W. Hook
  • Chlamydiology and Rickettsiology
    Western Blot Analysis of Sera Reactive to Human Monocytic Ehrlichiosis and Human Granulocytic Ehrlichiosis Agents
    Ahmet Unver, Suleyman Felek, Christopher D. Paddock, Ning Zhi, Harold W. Horowitz, Gary P. Wormser, Louis C. Cullman, Yasuko Rikihisa
  • Chlamydiology and Rickettsiology
    Chlamydia trachomatis Serology: Diagnostic Value of Outer Membrane Protein 2 Compared with That of Other Antigens
    S. Bas, P. Muzzin, T. L. Vischer
  • Chlamydiology and Rickettsiology
    High Prevalence of Granulocytic Ehrlichiae and Borrelia burgdorferi Sensu Lato in Ixodes ricinus Ticks from Bulgaria
    Iva Christova, Leo Schouls, Ingrid van de Pol, Jinho Park, Stefan Panayotov, Viktoria Lefterova, Todor Kantardjiev, J. Stephen Dumler
  • Chlamydiology and Rickettsiology
    Ehrlichia ruminantium Major Antigenic Protein Gene (map1) Variants Are Not Geographically Constrained and Show No Evidence of Having Evolved under Positive Selection Pressure
    M. T. E. P. Allsopp, C. M. Dorfling, J. C. Maillard, A. Bensaid, D. T. Haydon, H. van Heerden, B. A. Allsopp
  • Chlamydiology and Rickettsiology
    Novel Ehrlichia Genotype Detected in Dogs in South Africa
    M. T. E. P. Allsopp, B. A. Allsopp

Bacteriology

  • Bacteriology
    Helicobacter pylori Growth and Urease Detection in the Chemically Defined Medium Ham's F-12 Nutrient Mixture
    Traci L. Testerman, David J. McGee, Harry L. T. Mobley
  • Bacteriology
    PCR Analyses of tRNA Intergenic Spacer, 16S-23S Internal Transcribed Spacer, and Randomly Amplified Polymorphic DNA Reveal Inter- and Intraspecific Relationships ofEnterobacter cloacae Strains
    Maysa M. Clementino, Ivano de Filippis, Carlos R. Nascimento, Regina Branquinho, Carmem L. Rocha, Orlando B. Martins
  • Bacteriology
    Helicobacter typhlonius sp. nov., a Novel Murine Urease-Negative HelicobacterSpecies
    Craig L. Franklin, Peter L. Gorelick, Lela K. Riley, Floyd E. Dewhirst, Robert S. Livingston, Jerrold M. Ward, Catherine S. Beckwith, James G. Fox
  • Bacteriology
    Identification and Antimicrobial Susceptibility ofAlcaligenes xylosoxidans Isolated from Patients with Cystic Fibrosis
    Lisa Saiman, Yunhua Chen, Setareh Tabibi, Pablo San Gabriel, Juyan Zhou, Zhenling Liu, Lena Lai, Susan Whittier
  • Bacteriology
    Methicillin-Resistant Staphylococcus aureus: Comparison of Susceptibility Testing Methods and Analysis of mecA-Positive Susceptible Strains
    George Sakoulas, Howard S. Gold, Lata Venkataraman, Paola C. DeGirolami, George M. Eliopoulos, Qinfang Qian
  • Bacteriology
    Phenotypic Identification of Actinomycesand Related Species Isolated from Human Sources
    Nanna Sarkonen, Eija Könönen, Paula Summanen, Mauno Könönen, Hannele Jousimies-Somer
  • Bacteriology
    Characterization of SalmonellaAssociated with Pig Ear Dog Treats in Canada
    Clifford Clark, Jane Cunningham, Rafiq Ahmed, David Woodward, Kevin Fonseca, Sandy Isaacs, Andrea Ellis, Chandar Anand, Kim Ziebell, Anne Muckle, Paul Sockett, Frank Rodgers
  • Bacteriology
    Isolation of a Lysogenic Bacteriophage Carrying thestx1OX3 Gene, Which Is Closely Associated with Shiga Toxin-Producing Escherichia coli Strains from Sheep and Humans
    Claudia Koch, Stefan Hertwig, Rudi Lurz, Bernd Appel, Lothar Beutin
  • Bacteriology
    Recombinant Flagellin A Proteins from Borrelia burgdorferi Sensu Stricto, B.afzelii, and B. garinii in Serodiagnosis of Lyme Borreliosis
    Jaana Panelius, Pekka Lahdenne, Harri Saxen, Tero Heikkilä, Ilkka Seppälä
  • Bacteriology
    Analysis of Bacterial Vaginosis-Related Amines in Vaginal Fluid by Gas Chromatography and Mass Spectrometry
    Helen Wolrath, Urban Forsum, P. G. Larsson, Hans Borén
  • Bacteriology
    Multiplex PCR for Simultaneous Identification ofStaphylococcus aureus and Detection of Methicillin and Mupirocin Resistance
    E. Pérez-Roth, F. Claverie-Martı́n, J. Villar, S. Méndez-Álvarez
  • Bacteriology
    DNA Relatedness, Phenotypic Characteristics, and Antimicrobial Susceptibilities of Globicatella sanguinis Strains
    P. Lynn Shewmaker, Arnold G. Steigerwalt, LaShondra Shealey, Robbin Weyant, Richard R. Facklam
  • Bacteriology
    Clinical and Environmental Isolates of Vibrio cholerae Serogroup O141 Carry the CTX Phage and the Genes Encoding the Toxin-Coregulated Pili
    A. Dalsgaard, O. Serichantalergs, A. Forslund, W. Lin, J. Mekalanos, E. Mintz, T. Shimada, J. G. Wells
  • Bacteriology
    Diagnostic Examination of Human Intestinal Spirochetosis by Fluorescent In Situ Hybridization forBrachyspira aalborgi, Brachyspira pilosicoli, and Other Species of the Genus Brachyspira(Serpulina)
    T. K. Jensen, M. Boye, P. Ahrens, B. Korsager, P. S. Teglbjærg, C. F. Lindboe, K. Møller
  • Bacteriology
    Detection of Rifampin Resistance inMycobacterium tuberculosis in a Single Tube with Molecular Beacons
    Hiyam H. El-Hajj, Salvatore A. E. Marras, Sanjay Tyagi, Fred Russell Kramer, David Alland
  • Bacteriology
    Rapid and Accurate Determination of Genotypic Clarithromycin Resistance in Cultured Helicobacter pylori by Fluorescent In Situ Hybridization
    Holger Rüssmann, Kristin Adler, Rainer Haas, Bettina Gebert, Sibylle Koletzko, Jürgen Heesemann
  • Bacteriology
    Use of Quantitative PCR To Measure Density ofBorrelia burgdorferi in the Midgut and Salivary Glands of Feeding Tick Vectors
    Joseph Piesman, Bradley S. Schneider, Nordin S. Zeidner
  • Bacteriology
    Evaluation of a Latex Agglutination Test (MRSA-Screen) for Detection of Oxacillin Resistance in Coagulase-Negative Staphylococci
    L. Louie, A. Majury, J. Goodfellow, M. Louie, A. E. Simor
  • Bacteriology
    Cellular Fatty Acid Composition ofLautropia mirabilis
    Maryam I. Daneshvar, Michael P. Douglas, Robbin S. Weyant
  • Bacteriology
    Evaluation of a PCR/DNA Probe Colorimetric Membrane Assay for Identification of Campylobacter spp. in Human Stool Specimens
    Evelyn Collins, Maura Glennon, Shirley Hanley, Anne-Marie Murray, Martin Cormican, Terry Smith, Majella Maher
  • Bacteriology
    Unsatisfactory Performance of Flow Cytometer UF-100 and Urine Strips in Predicting Outcome of Urine Cultures
    Zahur Zaman, Sylvie Roggeman, Jan Verhaegen
  • Bacteriology
    Determining Confidence Intervals When Measuring Genetic Diversity and the Discriminatory Abilities of Typing Methods for Microorganisms
    Hajo Grundmann, Satoshi Hori, Gregor Tanner
  • Bacteriology
    Identification of Isolates of Streptococcus canisInfecting Humans
    Adrian M. Whatmore, Kathryn H. Engler, Gudny Gudmundsdottir, Androulla Efstratiou

Clinical Veterinary Microbiology

  • Clinical Veterinary Microbiology
    Validation of a Commercially Available Monoclonal Antibody-Based Competitive-Inhibition Enzyme-Linked Immunosorbent Assay for Detection of Serum Antibodies to Neospora caninum in Cattle
    Timothy V. Baszler, Scott Adams, John Vander-Schalie, Bruce A. Mathison, Miladin Kostovic
  • Clinical Veterinary Microbiology
    Characterization of Neospora caninum Surface Protein NcSRS2 Based on Baculovirus Expression System and Its Application for Serodiagnosis of NeosporaInfection
    Yoshifumi Nishikawa, Yuko Kousaka, Khajornsak Tragoolpua, Xuenan Xuan, Levi Makala, Kozo Fujisaki, Takeshi Mikami, Hideyuki Nagasawa
  • Clinical Veterinary Microbiology
    Plasmid-Borne smr Gene Causes Resistance to Quaternary Ammonium Compounds in BovineStaphylococcus aureus
    Jostein Bjorland, Marianne Sunde, Steinar Waage
  • Clinical Veterinary Microbiology
    Antimicrobial Growth Promoter Ban and Resistance to Macrolides and Vancomycin in Enterococci from Pigs
    P. Boerlin, A. Wissing, F. M. Aarestrup, J. Frey, J. Nicolet

Virology

  • Virology
    Correlation between Mutations in the Interferon Sensitivity-Determining Region of NS5A Protein and Viral Load of Hepatitis C Virus Subtypes 1b, 1c, and 2a
    Maria I. Lusida, Motoko Nagano-Fujii, Chairul A. Nidom, Soetjipto, Retno Handajani, Tsunenori Fujita, Kiyomasa Oka, Hak Hotta
  • Virology
    Functional Measurement of Hepatitis C Virus Core-Specific CD8+ T-Cell Responses in the Livers or Peripheral Blood of Patients by Using Autologous Peripheral Blood Mononuclear Cells as Targets or Stimulators
    Shih-Hua Fang, Bor-Luen Chiang, Mei-Hua Wu, Hideo Iba, Ming-Yang Lai, Pei-Ming Yang, Ding-Shinn Chen, Lih-Hwa Hwang
  • Virology
    Application of Virus-Specific Immunoglobulin M (IgM), IgG, and IgA Antibody Detection with a Polyantigenic Enzyme-Linked Immunosorbent Assay for Diagnosis of Epstein-Barr Virus Infections in Childhood
    Lars Schaade, Michael Kleines, Martin Häusler
  • Virology
    Qualitative Plasma PCR Assay (AMPLICOR CMV Test) versus pp65 Antigenemia Assay for Monitoring Cytomegalovirus Viremia and Guiding Preemptive Ganciclovir Therapy in Allogeneic Stem Cell Transplantation
    Carlos Solano, Isabel Muñoz, Antonio Gutiérrez, Amparo Farga, Felipe Prósper, Javier Garcı́a-Conde, David Navarro, Concepción Gimeno
  • Virology
    Molecular Epidemiology of Rotaviruses in Nigeria: Detection of Unusual Strains with G2P[6] and G8P[1] Specificities
    Mohammed I. Adah, Abel Wade, Koki Taniguchi
  • Virology
    Prospective Multicenter Clinical Evaluation of AMPLICOR and COBAS AMPLICOR Hepatitis C Virus Tests
    Frederick S. Nolte, Michael W. Fried, Mitchell L. Shiffman, Andrea Ferreira-Gonzalez, Carlton T. Garrett, Eugene R. Schiff, Stephen J. Polyak, David R. Gretch
  • Virology
    Emergence of G9 P[6] Human Rotaviruses in Argentina: Phylogenetic Relationships among G9 Strains
    Karin Bok, Gustavo Palacios, Karina Sijvarger, David Matson, Jorge Gomez
  • Virology
    Rapid Detection of Enterovirus RNA in Cerebrospinal Fluid Specimens with a Novel Single-Tube Real-Time Reverse Transcription-PCR Assay
    Walter A. Verstrepen, Sofie Kuhn, Mark M. Kockx, Martine E. Van De Vyvere, An H. Mertens
  • Virology
    Combined PCR-Heteroduplex Mobility Assay for Detection and Differentiation of Influenza A Viruses from Different Animal Species
    Joanna S. Ellis, Maria C. Zambon
  • Virology
    Development and Evaluation of Serotype- and Group-Specific Fluorogenic Reverse Transcriptase PCR (TaqMan) Assays for Dengue Virus
    Johnny D. Callahan, Shuenn-Jue L. Wu, Amanda Dion-Schultz, Beverly E. Mangold, Leonard F. Peruski, Douglas M. Watts, Kevin R. Porter, Gerald R. Murphy, Wuryadi Suharyono, Chwan-Chuen King, Curtis G. Hayes, Joseph J. Temenak
  • Virology
    Development and Evaluation of a Fluorogenic 5′ Nuclease Assay To Detect and Differentiate between Ebola Virus Subtypes Zaire and Sudan
    Tammy R. Gibb, David A. Norwood, Neal Woollen, Erik A. Henchal
  • Virology
    Epstein-Barr Virus (EBV) DNA in Sera of Patients with Primary EBV Infection
    K. H. Chan, M. H. Ng, W. H. Seto, J. S. M. Peiris
  • Virology
    Identification of Aichi Virus Infection by Measurement of Immunoglobulin Responses in an Enzyme-Linked Immunosorbent Assay
    Teruo Yamashita, Miyabi Ito, Hideaki Tsuzuki, Kenji Sakae
  • Virology
    Genome Typing of Adenovirus Type 34 Isolated in Two Cases of Conjunctivitis in Sapporo, Japan
    Waka Saitoh-Inagawa, Keico Tanaka, Eiichi Uchio, Norihiko Itoh, Shigeaki Ohno, Koki Aoki

Mycobacteriology and Aerobic Actinomycetes

  • Mycobacteriology and Aerobic Actinomycetes
    Luciferase Reporter Mycobacteriophages for Detection, Identification, and Antibiotic Susceptibility Testing ofMycobacterium tuberculosis in Mexico
    N. Banaiee, M. Bobadilla-del-Valle, S. Bardarov, P. F. Riska, P. M. Small, A. Ponce-de-Leon, W. R. Jacobs, G. F. Hatfull, J. Sifuentes-Osornio
  • Mycobacteriology and Aerobic Actinomycetes
    Burden of Unidentifiable Mycobacteria in a Reference Laboratory
    Enrico Tortoli, Alessandro Bartoloni, Erik C. Böttger, Stefan Emler, Carlo Garzelli, Enrico Magliano, Antonia Mantella, Nalin Rastogi, Laura Rindi, Claudio Scarparo, Pasquale Urbano
  • Mycobacteriology and Aerobic Actinomycetes
    Comparison of Methods for Identification ofMycobacterium abscessus and M. chelonae Isolates
    Mitchell A. Yakrus, S. Moises Hernandez, Margaret M. Floyd, David Sikes, W. Ray Butler, Beverly Metchock
  • Mycobacteriology and Aerobic Actinomycetes
    Application of a Simple Multiplex PCR To Aid in Routine Work of the Mycobacterium Reference Laboratory
    Dorothy Yeboah-Manu, Malcolm D. Yates, Stuart Mark Wilson
  • Mycobacteriology and Aerobic Actinomycetes
    Sequence Polymorphism in the rrs Gene ofMycobacterium tuberculosis Is Deeply Rooted within an Evolutionary Clade and Is Not Associated with Streptomycin Resistance
    Thomas C. Victor, Annelies van Rie, Annemie M. Jordaan, Madalene Richardson, Gian D. van der Spuy, Nulda Beyers, Paul D. van Helden, Robin Warren

Case Reports

  • CASE REPORTS
    Infected Branchial Cleft Cyst Due toBordetella bronchiseptica in an Immunocompetent Patient
    Vincent Lo Re, Patrick J. Brennan, Jill Wadlin, Robert Weaver, Irving Nachamkin
  • CASE REPORTS
    Isolation of a Nodulisporium Species from a Case of Cerebral Phaeohyphomycosis
    P. Umabala, V. Lakshmi, A. R. Murthy, V. S. S. V. Prasad, C. Sundaram, H. Beguin

Letters

  • LETTERS TO THE EDITOR
    Failure To Detect Brachyspira pilosicoli in Bloodstream of Australian Patients
    C. Josephine Brooke, David J. Hampson, Thomas V. Riley, Gary Lum
  • LETTERS TO THE EDITOR
    Fimbrial Typing of Bordetella pertussis Isolates: Agglutination with Polyclonal and Monoclonal Antibodies
    D. K. L. Xing, S. Ramakrishnan, P. Newland, M. J. Corbel
  • LETTERS TO THE EDITOR
    False-Negative Thermonuclease Tests with New BacTAlert Blood Culture Bottles
    L. D. Tilson, P. D. Midolo, T. G. Kerr
  • LETTERS TO THE EDITOR
    Efficient Isolation of Campylobacter upsaliensisfrom Stools
    Albert Joseph Lastovica, Elza Le Roux

Errata

  • Erratum
    Cryptococcus neoformans var. neoformans(Serotype D) Strains Are More Susceptible to Heat than C. neoformans var. grubii (Serotype A) Strains
    Luis R. Martinez, Javier Garcia-Rivera, Arturo Casadevall

Author's Correction

  • Author's Correction
    Identification of Two Different 14-α Sterol Demethylase-Related Genes (cyp51A and cyp51B) in Aspergillus fumigatus and Other AspergillusSpecies
    E. Mellado, T. M. Diaz-Guerra, M. Cuenca-Estrella, J. L. Rodriguez-Tudela
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