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Journal of Clinical Microbiology
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Virology

Comparison of Hepatitis C Virus Genotyping by 5′ Noncoding Region- and Core-Based Reverse Transcriptase PCR Assay with Sequencing and Use of the Assay for Determining Subtype Distribution in India

Kavita S. Lole, Jyotsna A. Jha, Sandhya P. Shrotri, Badri N. Tandon, V. G. Mohan Prasad, Vidya A. Arankalle
Kavita S. Lole
1Hepatitis Division, National Institute of Virology, Pune
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Jyotsna A. Jha
1Hepatitis Division, National Institute of Virology, Pune
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Sandhya P. Shrotri
1Hepatitis Division, National Institute of Virology, Pune
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Badri N. Tandon
2Metro Center for Liver and Digestive Diseases, Noida, Delhi
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V. G. Mohan Prasad
3KG Hospital and Post Graduate Research Institute, Coimbatore, India
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Vidya A. Arankalle
1Hepatitis Division, National Institute of Virology, Pune
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  • For correspondence: aarankalle@hotmail.com
DOI: 10.1128/JCM.41.11.5240-5244.2003
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Article Information

DOI 
https://doi.org/10.1128/JCM.41.11.5240-5244.2003
PubMed 
14605173

Published By 
American Society for Microbiology Journals
History 
  • Received May 29, 2003
  • Returned for modification July 14, 2003
  • Accepted August 18, 2003
  • Published online November 6, 2003.

Copyright & Usage 
Copyright © 2003 American Society for Microbiology

Author Information

  1. Kavita S. Lole1,
  2. Jyotsna A. Jha1,
  3. Sandhya P. Shrotri1,
  4. Badri N. Tandon2,
  5. V. G. Mohan Prasad3 and
  6. Vidya A. Arankalle1*
  1. 1Hepatitis Division, National Institute of Virology, Pune
  2. 2Metro Center for Liver and Digestive Diseases, Noida, Delhi
  3. 3KG Hospital and Post Graduate Research Institute, Coimbatore, India
  • ↵* Corresponding author. Mailing address: Hepatitis Division, National Institute of Virology, 20-A Dr. Ambedkar Rd., Pune 411001, India. Phone: 91-20-612-7301. Fax: 91-20-612-2669. E-mail: aarankalle{at}hotmail.com.
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Comparison of Hepatitis C Virus Genotyping by 5′ Noncoding Region- and Core-Based Reverse Transcriptase PCR Assay with Sequencing and Use of the Assay for Determining Subtype Distribution in India
Kavita S. Lole, Jyotsna A. Jha, Sandhya P. Shrotri, Badri N. Tandon, V. G. Mohan Prasad, Vidya A. Arankalle
Journal of Clinical Microbiology Nov 2003, 41 (11) 5240-5244; DOI: 10.1128/JCM.41.11.5240-5244.2003

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Comparison of Hepatitis C Virus Genotyping by 5′ Noncoding Region- and Core-Based Reverse Transcriptase PCR Assay with Sequencing and Use of the Assay for Determining Subtype Distribution in India
Kavita S. Lole, Jyotsna A. Jha, Sandhya P. Shrotri, Badri N. Tandon, V. G. Mohan Prasad, Vidya A. Arankalle
Journal of Clinical Microbiology Nov 2003, 41 (11) 5240-5244; DOI: 10.1128/JCM.41.11.5240-5244.2003
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  • Top
  • Article
    • ABSTRACT
    • Serum samples.
    • RT-PCR, sequencing, and phylogenetic analysis.
    • Genotyping based on 5′NCR analysis.
    • Analysis of the sequences in the core region.
    • Nucleotide sequence accession numbers.
    • ACKNOWLEDGMENTS
    • FOOTNOTES
    • REFERENCES
  • Figures & Data
  • Info & Metrics
  • PDF

KEYWORDS

Hepacivirus
Hepatitis C, Chronic
polymerase chain reaction

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