Skip to main content
  • ASM
    • Antimicrobial Agents and Chemotherapy
    • Applied and Environmental Microbiology
    • Clinical Microbiology Reviews
    • Clinical and Vaccine Immunology
    • EcoSal Plus
    • Eukaryotic Cell
    • Infection and Immunity
    • Journal of Bacteriology
    • Journal of Clinical Microbiology
    • Journal of Microbiology & Biology Education
    • Journal of Virology
    • mBio
    • Microbiology and Molecular Biology Reviews
    • Microbiology Resource Announcements
    • Microbiology Spectrum
    • Molecular and Cellular Biology
    • mSphere
    • mSystems
  • Log in
  • My alerts
  • My Cart

Main menu

  • Home
  • Articles
    • Current Issue
    • Accepted Manuscripts
    • COVID-19 Special Collection
    • Archive
    • Minireviews
  • For Authors
    • Submit a Manuscript
    • Scope
    • Editorial Policy
    • Submission, Review, & Publication Processes
    • Organization and Format
    • Errata, Author Corrections, Retractions
    • Illustrations and Tables
    • Nomenclature
    • Abbreviations and Conventions
    • Publication Fees
    • Ethics Resources and Policies
  • About the Journal
    • About JCM
    • Editor in Chief
    • Editorial Board
    • For Reviewers
    • For the Media
    • For Librarians
    • For Advertisers
    • Alerts
    • RSS
    • FAQ
  • Subscribe
    • Members
    • Institutions
  • ASM
    • Antimicrobial Agents and Chemotherapy
    • Applied and Environmental Microbiology
    • Clinical Microbiology Reviews
    • Clinical and Vaccine Immunology
    • EcoSal Plus
    • Eukaryotic Cell
    • Infection and Immunity
    • Journal of Bacteriology
    • Journal of Clinical Microbiology
    • Journal of Microbiology & Biology Education
    • Journal of Virology
    • mBio
    • Microbiology and Molecular Biology Reviews
    • Microbiology Resource Announcements
    • Microbiology Spectrum
    • Molecular and Cellular Biology
    • mSphere
    • mSystems

User menu

  • Log in
  • My alerts
  • My Cart

Search

  • Advanced search
Journal of Clinical Microbiology
publisher-logosite-logo

Advanced Search

  • Home
  • Articles
    • Current Issue
    • Accepted Manuscripts
    • COVID-19 Special Collection
    • Archive
    • Minireviews
  • For Authors
    • Submit a Manuscript
    • Scope
    • Editorial Policy
    • Submission, Review, & Publication Processes
    • Organization and Format
    • Errata, Author Corrections, Retractions
    • Illustrations and Tables
    • Nomenclature
    • Abbreviations and Conventions
    • Publication Fees
    • Ethics Resources and Policies
  • About the Journal
    • About JCM
    • Editor in Chief
    • Editorial Board
    • For Reviewers
    • For the Media
    • For Librarians
    • For Advertisers
    • Alerts
    • RSS
    • FAQ
  • Subscribe
    • Members
    • Institutions

Table of Contents

December 1, 2015; Volume 53,Issue 12

Photo Quiz

  • Photo Quiz
    Photo Quiz: False Intestinal Brush Border
    Abbey R. Johnston, Samer al Saghbini, Mark Li-cheng Wu, Ellena M. Peterson
  • Photo Quiz
    Answer to December 2015 Photo Quiz
    Abbey R. Johnston, Samer al Saghbini, Mark Li-cheng Wu, Ellena M. Peterson

Commentaries

  • Free
    Other
    Commentary: Continuing Challenges for the Clinical Laboratory for Detection of Carbapenem-Resistant Enterobacteriaceae
    Romney M. Humphries, James A. McKinnell
  • Free
    Other
    Commentary: The Race Is On To Shorten the Turnaround Time for Diagnosis of Multidrug-Resistant Tuberculosis
    Akos Somoskovi, Max Salfinger
  • Other
    Commentary: Individualized Quality Control Plan (IQCP): Is It Value-Added for Clinical Microbiology?
    Susan E. Sharp, Melissa B. Miller, Janet Hindler

Minireview

  • Minireview
    Multiplex Molecular Panels for Diagnosis of Gastrointestinal Infection: Performance, Result Interpretation, and Cost-Effectiveness
    Matthew J. Binnicker

Bacteriology

  • Free
    Bacteriology
    Clinical Performance of Check-Direct CPE, a Multiplex PCR for Direct Detection of bla KPC, bla NDM and/or bla VIM, and bla OXA-48 from Perirectal Swabs
    Anna F. Lau, Gary A. Fahle, Margaret A. Kemp, Agatha N. Jassem, John P. Dekker, Karen M. Frank
  • Bacteriology
    Detection of Polyclonality among Clinical Isolates from Prosthetic Joint Infections
    Marta De-la-Fuente, Marta Martinez-Perez, Iris Gonzalez-Pallares, Jaime Esteban
  • Bacteriology
    Complete Deletion of the Fucose Operon in Haemophilus influenzae Is Associated with a Cluster in Multilocus Sequence Analysis-Based Phylogenetic Group II Related to Haemophilus haemolyticus: Implications for Identification and Typing
    Camilla de Gier, Lea-Ann S. Kirkham, Niels Nørskov-Lauritsen
  • Bacteriology
    Evaluation of the Rapidec Carba NP Test for Detection of Carbapenemases in Enterobacteriaceae
    Michael Hombach, Barbara von Gunten, Claudio Castelberg, Guido V. Bloemberg
  • Bacteriology
    Standardization of Operator-Dependent Variables Affecting Precision and Accuracy of the Disk Diffusion Method for Antibiotic Susceptibility Testing
    Michael Hombach, Florian P. Maurer, Tamara Pfiffner, Erik C. Böttger, Reinhard Furrer
  • Bacteriology
    Determination of Disk Diffusion and MIC Quality Control Guidelines for Solithromycin, a Novel Fluoroketolide Antibacterial, against Neisseria gonorrhoeae
    Stefan Riedel, James E. Ross, David J. Farrell, Robert K. Flamm, Ronald N. Jones
  • Bacteriology
    Characterization of Achromobacter Species in Cystic Fibrosis Patients: Comparison of bla OXA-114 PCR Amplification, Multilocus Sequence Typing, and Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry
    Elenice R. A. Rodrigues, Alex G. Ferreira, Robson S. Leão, Cassiana C. F. Leite, Ana Paula Carvalho-Assef, Rodolpho M. Albano, Elizabeth A. Marques
  • Bacteriology
    Rapid Detection of Methicillin-Resistant Staphylococcus aureus and Methicillin-Susceptible S. aureus Directly from Positive Blood Cultures by Use of the BD Max StaphSR Assay
    Justin A. Ellem, Tom Olma, Matthew V. N. O'Sullivan
  • Bacteriology
    Simplified Protocol for Carba NP Test for Enhanced Detection of Carbapenemase Producers Directly from Bacterial Cultures
    Fernando Pasteran, Nathalie Tijet, Roberto G. Melano, Alejandra Corso
  • Bacteriology
    Tropheryma whipplei, a Potential Commensal Detected in Individuals Undergoing Routine Colonoscopy
    M. E. Grasman, A. M. Pettersson, A. Catsburg, A. G. Koek, A. A. van Bodegraven, P. H. M. Savelkoul
  • Bacteriology
    Recognition of Streptococcus pseudoporcinus Colonization in Women as a Consequence of Using Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry for Group B Streptococcus Identification
    Nuntra Suwantarat, Maureen Grundy, Mayer Rubin, Renee Harris, Jo-Anne Miller, Mark Romagnoli, Ann Hanlon, Tsigereda Tekle, Brandon C. Ellis, Frank R. Witter, Karen C. Carroll
  • Bacteriology
    Preliminary Evaluation of the Research-Use-Only (RUO) iCubate iC-GPC Assay for Identification of Select Gram-Positive Bacteria and Their Resistance Determinants in Blood Culture Broths
    Blake W. Buchan, Garrett C. Reymann, Paul A. Granato, Brenda R. Alkins, Patricia Jim, Stephen Young
  • Bacteriology
    Evaluation of the New BD Max GC Real-Time PCR Assay, Analytically and Clinically as a Supplementary Test for the BD ProbeTec GC Qx Amplified DNA Assay, for Molecular Detection of Neisseria gonorrhoeae
    Daniel Golparian, Stina Boräng, Martin Sundqvist, Magnus Unemo
  • Bacteriology
    A Novel Staphylococcal Cassette Chromosome mec Type XI Primer for Detection of mecC-Harboring Methicillin-Resistant Staphylococcus aureus Directly from Screening Specimens
    Sabine Petersdorf, Miriam Herma, Meike Rosenblatt, Franziska Layer, Birgit Henrich

Mycobacteriology and Aerobic Actinomycetes

  • Mycobacteriology and Aerobic Actinomycetes
    Metabolomic Profiling of Plasma from Patients with Tuberculosis by Use of Untargeted Mass Spectrometry Reveals Novel Biomarkers for Diagnosis
    Susanna K. P. Lau, Kim-Chung Lee, Shirly O. T. Curreem, Wang-Ngai Chow, Kelvin K. W. To, Ivan F. N. Hung, Deborah T. Y. Ho, Siddharth Sridhar, Iris W. S. Li, Vanessa S. Y. Ding, Eleanor W. F. Koo, Chi-Fong Wong, Sidney Tam, Ching-Wan Lam, Kwok-Yung Yuen, Patrick C. Y. Woo
  • Mycobacteriology and Aerobic Actinomycetes
    Improved Detection by Next-Generation Sequencing of Pyrazinamide Resistance in Mycobacterium tuberculosis Isolates
    Nontuthuko E. Maningi, Luke T. Daum, John D. Rodriguez, Matsie Mphahlele, Remco P. H. Peters, Gerald W. Fischer, James P. Chambers, P. Bernard Fourie
  • Mycobacteriology and Aerobic Actinomycetes
    Epidemiology of Nontuberculous Mycobacteria in French Polynesia
    Michael Phelippeau, Djaltou Aboubaker Osman, Didier Musso, Michel Drancourt
  • Mycobacteriology and Aerobic Actinomycetes
    Multidrug-Resistant Mycobacterium tuberculosis of the Latin American Mediterranean Lineage, Wrongly Identified as Mycobacterium pinnipedii (Spoligotype International Type 863 [SIT863]), Causing Active Tuberculosis in South Brazil
    Elis R. Dalla Costa, Sidra E. G. Vasconcelos, Leonardo S. Esteves, Harrison M. Gomes, Lia L. Gomes, Pedro Almeida da Silva, João Perdigão, Isabel Portugal, Miguel Viveiros, Ruth McNerney, Arnab Pain, Taane G. Clark, Nalin Rastogi, Gisela Unis, Maria Lucia R. Rossetti, Philip Noel Suffys
  • Free
    Mycobacteriology and Aerobic Actinomycetes
    Lab-on-Chip-Based Platform for Fast Molecular Diagnosis of Multidrug-Resistant Tuberculosis
    Andrea M. Cabibbe, Paolo Miotto, Raquel Moure, Fernando Alcaide, Silke Feuerriegel, Gianni Pozzi, Vladislav Nikolayevskyy, Francis Drobniewski, Stefan Niemann, Klaus Reither, Daniela M. Cirillo
    and TM-REST Consortium, TB-CHILD Consortium

Mycology

  • Mycology
    Impact of HIV Infection Status on Interpretation of Quantitative PCR for Detection of Pneumocystis jirovecii
    M. Louis, J. Guitard, M. Jodar, T. Ancelle, D. Magne, O. Lascols, C. Hennequin

Parasitology

  • Parasitology
    Evaluation of a New Immunochromatographic Test Using Recombinant Antigen B8/1 for Diagnosis of Cystic Echinococcosis
    Saul J. Santivañez, Mary L. Rodriguez, Silvia Rodriguez, Yashuito Sako, Agathe Nkouawa, Yukuharu Kobayashi, Alfredo L. Sotomayor, Julio E. Peralta, Maria Valcarcel, Armando E. Gonzalez, Hector H. Garcia, Akira Ito
  • Parasitology
    A Correlative Study of Splenic Parasite Score and Peripheral Blood Parasite Load Estimation by Quantitative PCR in Visceral Leishmaniasis
    Medhavi Sudarshan, Toolika Singh, Jaya Chakravarty, Shyam Sundar

Virology

  • Virology
    Diagnostic Accuracy of Rapid Antigen Detection Tests for Respiratory Syncytial Virus Infection: Systematic Review and Meta-analysis
    Caroline Chartrand, Nicolas Tremblay, Christian Renaud, Jesse Papenburg
  • Virology
    FilmArray Respiratory Panel Assay: Comparison of Nasopharyngeal Swabs and Bronchoalveolar Lavage Samples
    Natalya Azadeh, Kenneth K. Sakata, Anjuli M. Brighton, Holenarasipur R. Vikram, Thomas E. Grys
  • Virology
    Comparative Evaluation of Three Nucleic Acid-Based Assays for BK Virus Quantification
    Veronique Descamps, Elodie Martin, Virginie Morel, Catherine François, François Helle, Gilles Duverlie, Sandrine Castelain, Etienne Brochot
  • Virology
    Sequence Variation in Amplification Target Genes and Standards Influences Interlaboratory Comparison of BK Virus DNA Load Measurement
    Morgane Solis, Mariam Meddeb, Charlotte Sueur, Pilar Domingo-Calap, Eric Soulier, Angeline Chabaud, Peggy Perrin, Bruno Moulin, Seiamak Bahram, Françoise Stoll-Keller, Sophie Caillard, Heidi Barth, Samira Fafi-Kremer
    and on behalf of the French BKV Study Group
  • Virology
    Performance of an Early Infant Diagnostic Test, AmpliSens DNA-HIV-FRT, Using Dried Blood Spots Collected from Children Born to Human Immunodeficiency Virus-Infected Mothers in Ukraine
    Joy Chang, Tetyana Tarasova, Vedapuri Shanmugam, Marianna Azarskova, Shon Nguyen, Mackenzie Hurlston, Jennifer Sabatier, Guoqing Zhang, Saladin Osmanov, Dennis Ellenberger, Chunfu Yang, Charles Vitek, Maria Liulchuk, Natalya Nizova
  • Virology
    Rapid Detection of Subtype H10N8 Influenza Virus by One-Step Reverse Transcription–Loop-Mediated Isothermal Amplification Methods
    Hongmei Bao, Xiaoxiao Feng, Yong Ma, Jianzhong Shi, Yuhui Zhao, Linlin Gu, Xiurong Wang, Hualan Chen
  • Virology
    Testing for Herpes Simplex Virus in Low-Volume Cerebrospinal Fluid Samples: Comparison of Three Protocols To Optimize Detection
    Mark J. Espy, Cole L. Irish, Matthew J. Binnicker
  • Virology
    Norovirus Antigen Detection with a Combination of Monoclonal and Single-Chain Antibodies
    Baijun Kou, Wanzhi Huang, Frederick H. Neill, Timothy Palzkill, Mary K. Estes, Robert L. Atmar
  • Open Access
    Virology
    Comparative Evaluation of AmpliVue HSV 1+2 Assay with ELVIS Culture for Detecting Herpes Simplex Virus 1 (HSV-1) and HSV-2 in Clinical Specimens
    Paul A. Granato, Brenda R. Alkins, Belinda Yen-Lieberman, Wallace H. Greene, Jessica Connolly, Blake W. Buchan, Nathan A. Ledeboer

Immunoassays

  • Immunoassays
    Development of a Multiantigen Panel for Improved Detection of Borrelia burgdorferi Infection in Early Lyme Disease
    Lauren J. Lahey, Michael W. Panas, Rong Mao, Michelle Delanoy, John J. Flanagan, Steven R. Binder, Alison W. Rebman, Jose G. Montoya, Mark J. Soloski, Allen C. Steere, Raymond J. Dattwyler, Paul M. Arnaboldi, John N. Aucott, William H. Robinson

Clinical Veterinary Microbiology

  • Clinical Veterinary Microbiology
    Direct Repeat Unit (dru) Typing of Methicillin-Resistant Staphylococcus pseudintermedius from Dogs and Cats
    Kristina Kadlec, Stefan Schwarz, Richard V. Goering, J. Scott Weese
  • Clinical Veterinary Microbiology
    Development of a Multiplex PCR Assay for Rapid Molecular Serotyping of Haemophilus parasuis
    Kate J. Howell, Sarah E. Peters, Jinhong Wang, Juan Hernandez-Garcia, Lucy A. Weinert, Shi-Lu Luan, Roy R. Chaudhuri, Øystein Angen, Virginia Aragon, Susanna M. Williamson, Julian Parkhill, Paul R. Langford, Andrew N. Rycroft, Brendan W. Wren, Duncan J. Maskell, Alexander W. Tucker
    and on behalf of the BRaDP1T Consortium
  • Clinical Veterinary Microbiology
    One-Step Identification of Five Prominent Chicken Salmonella Serovars and Biotypes
    Chunhong Zhu, Min Yue, Shelley Rankin, François-Xavier Weill, Joachim Frey, Dieter M. Schifferli
  • Clinical Veterinary Microbiology
    Characterization of Five Zoonotic Streptococcus suis Strains from Germany, Including One Isolate from a Recent Fatal Case of Streptococcal Toxic Shock-Like Syndrome in a Hunter
    Tobias Eisenberg, Christoph Hudemann, Hamid M. Hossain, Angela Hewer, Khodr Tello, Dirk Bandorski, Manfred Rohde, Peter Valentin-Weigand, Christoph Georg Baums

Epidemiology

  • Epidemiology
    Core Genome Multilocus Sequence Typing Scheme for High-Resolution Typing of Enterococcus faecium
    Mark de Been, Mette Pinholt, Janetta Top, Stefan Bletz, Alexander Mellmann, Willem van Schaik, Ellen Brouwer, Malbert Rogers, Yvette Kraat, Marc Bonten, Jukka Corander, Henrik Westh, Dag Harmsen, Rob J. L. Willems
  • Epidemiology
    Comparison of Molecular Characteristics of Mycoplasma pneumoniae Specimens Collected from the United States and China
    Chao Yan, Hongmei Sun, Stella Lee, Rangaraj Selvarangan, Xuan Qin, Yi-Wei Tang, Ken B. Waites, Xiaotian Zheng

Case Reports

  • CASE REPORTS
    First Report of Wohlfahrtiimonas chitiniclastica Isolation from a Patient with Cellulitis in the United States
    Angel de Dios, Seby Jacob, Amit Tayal, Mark A. Fisher, Tanis C. Dingle, Camille L. Hamula
  • CASE REPORTS
    Successful Treatment of Peritoneal Dialysis Catheter-Related Polymicrobial Peritonitis Involving Clostridium difficile
    Sheena Bharti, Prashant Malhotra, Stefan Juretschko
  • CASE REPORTS
    Francisella philomiragia Bacteremia in a Patient with Acute Respiratory Insufficiency and Acute-on-Chronic Kidney Disease
    Ryan F. Relich, Romney M. Humphries, H. Reid Mattison, Jessica E. Miles, Edward R. Simpson, Ian J. Corbett, Bryan H. Schmitt, M. May
  • CASE REPORTS
    Vancomycin-Variable Enterococcal Bacteremia
    M. A. Downing, J. Xiong, A. Eshaghi, A. McGeer, S. N. Patel, J. Johnstone

Letter to the Editor

  • Letter to the Editor
    Comparative Performance of Three Rapid HBsAg Assays for Detection of HBs Diagnostic Escape Mutants in Clinical Samples
    Annabelle Servant-Delmas, Thoai Duong Ly, Clémence Hamon, Ali Kassim Houdah, Syria Laperche

Masthead

  • Free
    Masthead
    Editorial Board
PreviousNext
Back to top

Journal of Clinical Microbiology: 53 (12)

In This Issue

volume 53, issue 12
  • Table of Contents (PDF)
  • Journal Cover & Description
Sign up for alerts

Jump to

  • Photo Quiz
  • Commentaries
  • Minireview
  • Bacteriology
  • Mycobacteriology and Aerobic Actinomycetes
  • Mycology
  • Parasitology
  • Virology
  • Immunoassays
  • Clinical Veterinary Microbiology
  • Epidemiology
  • Case Reports
  • Letter to the Editor
  • Masthead
  • Most Read
  • Most Cited
Loading
  • Laboratory Diagnosis of COVID-19: Current Issues and Challenges
  • When To Retest: an Examination of Repeat COVID-19 PCR Patterns in an Ambulatory Population
  • Performance of Abbott ID Now COVID-19 Rapid Nucleic Acid Amplification Test Using Nasopharyngeal Swabs Transported in Viral Transport Media and Dry Nasal Swabs in a New York City Academic Institution
  • Clinical Evaluation of BD Veritor SARS-CoV-2 Point-of-Care Test Performance Compared to PCR-Based Testing and versus the Sofia 2 SARS Antigen Point-of-Care Test
More...

About

  • About JCM
  • Editor in Chief
  • Board of Editors
  • Editor Conflicts of Interest
  • For Reviewers
  • For the Media
  • For Librarians
  • For Advertisers
  • Alerts
  • RSS
  • FAQ
  • Permissions
  • Journal Announcements

Authors

  • ASM Author Center
  • Submit a Manuscript
  • Article Types
  • Resources for Clinical Microbiologists
  • Ethics
  • Contact Us

Follow #JClinMicro

@ASMicrobiology

       

ASM Journals

ASM journals are the most prominent publications in the field, delivering up-to-date and authoritative coverage of both basic and clinical microbiology.

About ASM | Contact Us | Press Room

 

ASM is a member of

Scientific Society Publisher Alliance

 

American Society for Microbiology
1752 N St. NW
Washington, DC 20036
Phone: (202) 737-3600

 

Copyright © 2021 American Society for Microbiology | Privacy Policy | Website feedback

Print ISSN: 0095-1137; Online ISSN: 1098-660X