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Mycology

Nanopore Sequencing of the Fungal Intergenic Spacer Sequence as a Potential Rapid Diagnostic Assay

Gretchen A. Morrison, Jianmin Fu, Grace C. Lee, Nathan P. Wiederhold, Connie F. Cañete-Gibas, Evelien M. Bunnik, Brian L. Wickes
Kimberly E. Hanson, Editor
Gretchen A. Morrison
aDepartment of Microbiology, Immunology, and Molecular Genetics, The University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA
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Jianmin Fu
aDepartment of Microbiology, Immunology, and Molecular Genetics, The University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA
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Grace C. Lee
bThe University of Texas at Austin, College of Pharmacy, Austin, Texas, USA
cPharmacotherapy Education and Research Center, The University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA
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Nathan P. Wiederhold
dUTHSCSA Fungus Testing Laboratory, Departments of Pathology and Laboratory Medicine, The University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA
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  • ORCID record for Nathan P. Wiederhold
Connie F. Cañete-Gibas
dUTHSCSA Fungus Testing Laboratory, Departments of Pathology and Laboratory Medicine, The University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA
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Evelien M. Bunnik
aDepartment of Microbiology, Immunology, and Molecular Genetics, The University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA
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Brian L. Wickes
aDepartment of Microbiology, Immunology, and Molecular Genetics, The University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA
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Kimberly E. Hanson
University of Utah
Roles: Editor
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DOI: 10.1128/JCM.01972-20
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Article Information

DOI 
https://doi.org/10.1128/JCM.01972-20
PubMed 
32967904

Published By 
American Society for Microbiology Journals
History 
  • Received July 27, 2020
  • Returned for modification September 10, 2020
  • Accepted September 12, 2020
  • Published online November 18, 2020.

Copyright & Usage 
Copyright © 2020 American Society for Microbiology. All Rights Reserved.
Editors and / or Reviewers 
  • Kimberly E. Hanson, Editor, University of Utah

Article Versions

  • Accepted Manuscript version (September 23, 2020).
  • You are viewing the most recent version of this article.

Author Information

  1. Gretchen A. Morrisona,
  2. Jianmin Fua,
  3. Grace C. Leeb,c,
  4. Nathan P. Wiederholdd,
  5. Connie F. Cañete-Gibasd,
  6. Evelien M. Bunnika and
  7. Brian L. Wickesa
  1. aDepartment of Microbiology, Immunology, and Molecular Genetics, The University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA
  2. bThe University of Texas at Austin, College of Pharmacy, Austin, Texas, USA
  3. cPharmacotherapy Education and Research Center, The University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA
  4. dUTHSCSA Fungus Testing Laboratory, Departments of Pathology and Laboratory Medicine, The University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA
  • Address correspondence to Brian L. Wickes, wickes{at}uthscsa.edu.
  • Citation Morrison GA, Fu J, Lee GC, Wiederhold NP, Cañete-Gibas CF, Bunnik EM, Wickes BL. 2020. Nanopore sequencing of the fungal intergenic spacer sequence as a potential rapid diagnostic assay. J Clin Microbiol 58:e01972-20. https://doi.org/10.1128/JCM.01972-20.

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Nanopore Sequencing of the Fungal Intergenic Spacer Sequence as a Potential Rapid Diagnostic Assay
Gretchen A. Morrison, Jianmin Fu, Grace C. Lee, Nathan P. Wiederhold, Connie F. Cañete-Gibas, Evelien M. Bunnik, Brian L. Wickes
Journal of Clinical Microbiology Nov 2020, 58 (12) e01972-20; DOI: 10.1128/JCM.01972-20

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Nanopore Sequencing of the Fungal Intergenic Spacer Sequence as a Potential Rapid Diagnostic Assay
Gretchen A. Morrison, Jianmin Fu, Grace C. Lee, Nathan P. Wiederhold, Connie F. Cañete-Gibas, Evelien M. Bunnik, Brian L. Wickes
Journal of Clinical Microbiology Nov 2020, 58 (12) e01972-20; DOI: 10.1128/JCM.01972-20
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KEYWORDS

DNA sequencing
diagnostic
fungal

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