Skip to main content
  • ASM
    • Antimicrobial Agents and Chemotherapy
    • Applied and Environmental Microbiology
    • Clinical Microbiology Reviews
    • Clinical and Vaccine Immunology
    • EcoSal Plus
    • Eukaryotic Cell
    • Infection and Immunity
    • Journal of Bacteriology
    • Journal of Clinical Microbiology
    • Journal of Microbiology & Biology Education
    • Journal of Virology
    • mBio
    • Microbiology and Molecular Biology Reviews
    • Microbiology Resource Announcements
    • Microbiology Spectrum
    • Molecular and Cellular Biology
    • mSphere
    • mSystems
  • Log in
  • My alerts
  • My Cart

Main menu

  • Home
  • Articles
    • Current Issue
    • Accepted Manuscripts
    • COVID-19 Special Collection
    • Archive
    • Minireviews
  • For Authors
    • Submit a Manuscript
    • Scope
    • Editorial Policy
    • Submission, Review, & Publication Processes
    • Organization and Format
    • Errata, Author Corrections, Retractions
    • Illustrations and Tables
    • Nomenclature
    • Abbreviations and Conventions
    • Publication Fees
    • Ethics Resources and Policies
  • About the Journal
    • About JCM
    • Editor in Chief
    • Editorial Board
    • For Reviewers
    • For the Media
    • For Librarians
    • For Advertisers
    • Alerts
    • RSS
    • FAQ
  • Subscribe
    • Members
    • Institutions
  • ASM
    • Antimicrobial Agents and Chemotherapy
    • Applied and Environmental Microbiology
    • Clinical Microbiology Reviews
    • Clinical and Vaccine Immunology
    • EcoSal Plus
    • Eukaryotic Cell
    • Infection and Immunity
    • Journal of Bacteriology
    • Journal of Clinical Microbiology
    • Journal of Microbiology & Biology Education
    • Journal of Virology
    • mBio
    • Microbiology and Molecular Biology Reviews
    • Microbiology Resource Announcements
    • Microbiology Spectrum
    • Molecular and Cellular Biology
    • mSphere
    • mSystems

User menu

  • Log in
  • My alerts
  • My Cart

Search

  • Advanced search
Journal of Clinical Microbiology
publisher-logosite-logo

Advanced Search

  • Home
  • Articles
    • Current Issue
    • Accepted Manuscripts
    • COVID-19 Special Collection
    • Archive
    • Minireviews
  • For Authors
    • Submit a Manuscript
    • Scope
    • Editorial Policy
    • Submission, Review, & Publication Processes
    • Organization and Format
    • Errata, Author Corrections, Retractions
    • Illustrations and Tables
    • Nomenclature
    • Abbreviations and Conventions
    • Publication Fees
    • Ethics Resources and Policies
  • About the Journal
    • About JCM
    • Editor in Chief
    • Editorial Board
    • For Reviewers
    • For the Media
    • For Librarians
    • For Advertisers
    • Alerts
    • RSS
    • FAQ
  • Subscribe
    • Members
    • Institutions

Accepted Manuscripts

November 25, 2020

  • Open Access
    Bacteriology
    Benefits Derived from Full Laboratory Automation in Microbiology: A Tale of Four Laboratories
    Karissa Culbreath, Heather Piwonka, John Korver, Mir Noorbash
  • Bacteriology
    A Bioinformatic Pipeline for Improved Genome Analysis and Clustering of Isolates during Outbreaks of Legionnaires’ Disease
    Wolfgang Haas, Pascal Lapierre, Kimberlee A. Musser
  • Open Access
    Virology
    Clinical performance of the point-of-care cobas Liat for detection of SARS-CoV-2 in 20 minutes: A multicenter study
    Glen Hansen, Jamie Marino, Zi-Xuan Wang, Kathleen G. Beavis, John Rodrigo, Kylie Labog, Lars F. Westblade, Run Jin, Nedra Love, Karen Ding, Sachin Garg, Alan Huang, Joanna Sickler, Nam K. Tran
  • Open Access
    Bacteriology
    Evaluation of Molecular Serotyping Assays for Shigella flexneri Directly on Stool Samples
    Jie Liu, Suporn Pholwat, Jixian Zhang, Mami Taniuchi, Rashidul Haque, Masud Alam, John Benjamin Ochieng, Jennifer A. Jones, James A. Platts-Mills, Sharon M. Tennant, Eric Houpt
  • Virology
    Dynamics of HEV Antibodies and Development of a Multi-factorial Model to Improve the Diagnosis of Current HEV Infection in Resource-limited Settings
    Jie Lu, Yan Huang, Peiyun Wang, Qing Li, Ziqiang Li, Jiayuan Jiang, Qing Guo, Honglian Gui, Qing Xie
  • Bacteriology
    Evaluation of Optimal Blood Culture Incubation Time to Maximize Clinically Relevant Results from a Contemporary Blood Culture Instrument and Media System
    Eric M. Ransom, Zahra Alipour, Meghan A. Wallace, Carey-Ann D. Burnham
  • Free
    Immunoassays
    Evaluating Ten Commercially-Available SARS-CoV-2 Rapid Serological Tests Using the STARD (Standards for Reporting of Diagnostic Accuracy Studies) Method.
    Laurent Dortet, Jean-Baptiste Ronat, Christelle Vauloup-Fellous, Céline Langendorf, David-Alexis Mendels, Cécile Emeraud, Saoussen Oueslati, Delphine Girlich, Anthony Chauvin, Ali Afdjei, Sandrine Bernabeu, Samuel Le Pape, Rim Kallala, Alice Rochard, Celine Verstuyft, Nicolas Fortineau, Anne-Marie Roque-Afonso, Thierry Naas
  • Free
    Virology
    Saliva is a Promising Alternative Specimen for the Detection of SARS-CoV-2 in Children and Adults
    Rebecca Yee, Thao Truong, Pia S. Pannaraj, Natalie Eubanks, Emily Gai, Jaycee Jumarang, Lauren Turner, Ariana Peralta, Yesun Lee, Jennifer Dien Bard
  • Free
    Virology
    Inference of Active Viral Replication in Cases with Sustained Positive RT-PCRs for SARS-CoV-2
    Cristina Rodríguez-Grande, Javier Adán-Jiménez, Pilar Catalán, Luis Alcalá, Agustín Estévez, Patricia Muñoz, Laura Pérez-Lago, Darío García de Viedma
    and on behalf of Gregorio Marañón Microbiology-ID COVID 19 Study Group
  • Free
    Virology
    Comparison of Quidel Sofia SARS FIA Test to Hologic Aptima SARS-CoV-2 TMA Test for Diagnosis of COVID-19 in Symptomatic Outpatients
    Eric T. Beck, Wendy Paar, Lara Fojut, Jordan Serwe, Renee R. Jahnke
  • Open Access
    Mycobacteriology and Aerobic Actinomycetes
    Serum-based Diagnosis of Pediatric Tuberculosis by Assay of Mycobacterium tuberculosis Factors: a retrospective cohort study
    Yifan He, Christopher J. Lyon, Duc T Nguyen, Chang Liu, Wei Sha, Edward A Graviss, Tony Y. Hu
  • Mycobacteriology and Aerobic Actinomycetes
    Direct PCR on tissue samples to detect Mycobacterium tuberculosis complex: an alternative to the bacteriological culture
    V Lorente-Leal, E Liandris, M Pacciarini, A Botelho, K Kenny, B Loyo, R Fernández, J Bezos, L Domínguez, L de Juan, B Romero

November 24, 2020

  • Free
    Immunoassays
    Detection of SARS-CoV-2 antibodies in oral fluid obtained using a rapid collection device
    Melanie A. MacMullan, Prithivi Chellamuthu, Aubree Mades, Sudipta Das, Fred Turner, Vladimir I. Slepnev, Albina Ibrayeva

November 20, 2020

  • Open Access
    Immunoassays
    Performance of the COVID-19 SEROSpeed IgM/IgG Rapid Test, an immunochromatographic assay for the diagnosis of SARS-CoV-2 infection: a multicenter European study.
    Mario Plebani, Marijo Parčina, Issam Bechri, Gianguglielmo Zehender, Vedrana Terkeš, Balqis Abdel Hafith, Spinello Antinori, Sylvie Pillet, Sylvie Gonzalo, Achim Hoerauf, Alessia Lai, Miro Morović, Thomas Bourlet, Alessandro Torre, Bruno Pozzetto, Massimo Galli

November 18, 2020

  • Free
    Immunoassays
    Evaluation of Serological SARS-CoV-2 Lateral Flow Assays for Rapid Point of Care Testing
    Steven E. Conklin, Kathryn Martin, Yukari C Manabe, Haley A Schmidt, Jernelle Miller, Morgan Keruly, Ethan Klock, Charles S Kirby, Owen R Baker, Reinaldo E Fernandez, Yolanda J Eby, Justin Hardick, Kathryn Shaw-Saliba, Richard E Rothman, Patrizio P Caturegli, Andrew D. Redd, Aaron A. R. Tobian, Evan M Bloch, H Benjamin Larman, Thomas C Quinn, William Clarke, Oliver Laeyendecker
  • Parasitology
    Maternal anti-Toxoplasma Treatment during Pregnancy is Associated with Reduced Sensitivity of Diagnostic Tests for Congenital Infection in the Neonate
    Hélène Guegan, Tijana Stäjner, Branko Bobic, Cindy Press, Rares T. Olariu, Kjerstie Olson, Jelena Srbljanovic, Jose G. Montoya, Olgica Djurković-Djaković, Florence Robert-Gangneux
  • Minireview
    Unstimulated pleural fluid interferon-gamma for diagnosis of tuberculous pleural effusion: a systematic review and meta-analysis
    Ashutosh Nath Aggarwal, Ritesh Agarwal, Sahajal Dhooria, Kuruswamy Thurai Prasad, Inderpaul Singh Sehgal, Valliappan Muthu
  • Mycology
    A selective medium for isolation and detection of Candida auris; an emerging pathogen
    Sourav Das, Shreya Singh, Yamini Tawde, Arunaloke Chakrabarti, Shamanth A Shankarnarayan, Shivaprakash M Rudramurthy, Harsimran Kaur, Anup Ghosh
  • Bacteriology
    Streptococcus pseudopneumoniae: Use of whole genome sequences to validate methods used for identification
    Christian Salgård Jensen, Katrine Højholt Iversen, Rimtas Dargis, Patricia Shewmaker, Simon Rasmussen, Jens Jørgen Christensen, Xiaohui Chen Nielsen

November 12, 2020

  • Free
    Letter to the Editor
    Extraction-free methods for the detection of SARS-CoV-2 by RT-PCR: a comparison with the Cepheid Xpert Xpress SARS-CoV-2 assay across two medical centers
    Andrew Cameron, Nicole Pecora, Matthew Pettengill

Pages

  • Previous
  • Next
  • 1
  • 2
  • 3
  • 4
  • 5
Back to top

DISCLAIMER: These manuscripts are provided "as is" without warranty of any kind, either expressly for a particular purpose, or non-infringement. Changes will be made to these manuscripts before publication. Review and/or use or reliance on these materials is at the discretion and risk of the reader/user. In no event shall American Society for Microbiology be liable for damages of any kind arising from these materials; references to, products or publications do not imply endorsement of those products or publications .

Accepted Manuscripts are PDF versions of manuscripts that have been peer reviewed and accepted but not yet copyedited. The manuscripts are published online as soon as possible after acceptance, on a weekly basis, before the copyedited, typeset articles are published. They are posted "as is" (i.e., as submitted by the authors at the modification stage) and do not reflect ASM editorial changes. No corrections/changes to the PDF manuscripts are accepted. Accordingly, there likely will be differences between the accepted manuscripts and the final, typeset articles. The manuscripts remain listed on the Accepted Manuscripts page until the final, typeset articles are posted. Supplemental material intended, and accepted, for publication is not posted until publication of the final, typeset articles.

Journal of Clinical Microbiology: 59 (1)

Current Issue

volume 59, issue 1
  • Table of Contents (PDF)
  • Journal Cover & Description
  • Most Read
  • Most Cited
Loading
  • Laboratory Diagnosis of COVID-19: Current Issues and Challenges
  • When To Retest: an Examination of Repeat COVID-19 PCR Patterns in an Ambulatory Population
  • Performance of Abbott ID Now COVID-19 Rapid Nucleic Acid Amplification Test Using Nasopharyngeal Swabs Transported in Viral Transport Media and Dry Nasal Swabs in a New York City Academic Institution
  • Clinical Evaluation of BD Veritor SARS-CoV-2 Point-of-Care Test Performance Compared to PCR-Based Testing and versus the Sofia 2 SARS Antigen Point-of-Care Test
More...

About

  • About JCM
  • Editor in Chief
  • Board of Editors
  • Editor Conflicts of Interest
  • For Reviewers
  • For the Media
  • For Librarians
  • For Advertisers
  • Alerts
  • RSS
  • FAQ
  • Permissions
  • Journal Announcements

Authors

  • ASM Author Center
  • Submit a Manuscript
  • Article Types
  • Resources for Clinical Microbiologists
  • Ethics
  • Contact Us

Follow #JClinMicro

@ASMicrobiology

       

ASM Journals

ASM journals are the most prominent publications in the field, delivering up-to-date and authoritative coverage of both basic and clinical microbiology.

About ASM | Contact Us | Press Room

 

ASM is a member of

Scientific Society Publisher Alliance

 

American Society for Microbiology
1752 N St. NW
Washington, DC 20036
Phone: (202) 737-3600

 

Copyright © 2021 American Society for Microbiology | Privacy Policy | Website feedback

Print ISSN: 0095-1137; Online ISSN: 1098-660X