TABLE 4.

Profiles of alleles at 11 SSR loci for 20 clones of M. paratuberculosis

MLSSR typeReference isolateNo. of isolatesNo. of copies of SSRs or no. of nucleotide substitutions at the following locus
1a2a3b4b5b6c7c8c9c10c11c
1MAP-061711511553100
2MAP-081710555544455
300331711555454455
400164711555454355
500282710555454355
6MAP-0911111555555553
702373>149555555555
805601>1411555555555
900261810555555555
10MAP-K103>1410555555555
11MAP-143710555555555
120040179553555555
130558179555555555
1401611811555554555
1500111911555554555
1600301911555555555
1700042711555555555
1800141711555556555
19MAP-111>1411454453464
2000073>1410454453464
  • a The numbers of G mononucleotides present (>14, 14 or more).

  • b The numbers of copies of the dinucleotide repeat.

  • c The numbers of copies of the trinucleotide repeat.