TABLE 1.

M. paratuberculosis isolates examined in this study

StrainHostGeographic originYr of isolationMPIL typeaAFLP typebMLSSR clustercMLSSR typed
MAP-06eOvineOhioNAfA1NAM11
MAP-08eBovineOhio2001A18NAM22
0033CaprineOhioNAA18Z1M23
0016BovineOhioNAA18Z6M24
0041BovineN.Y.1983A18Z9M24
0029CaprineIowaNAA18Z2M24
0239CaprineOhioNAA18Z2M24
0028BovineOhioNAA18Z11M25
0240BovineIowa1983A18Z21M25
MAP-09eBovineOhio2001NANAM36
0034BovineMinn.1984A18Z1M37
0161-2RabbitMinn.2001NANAM37
0237RabbitMinn.2001NANAM37
0560SoilMinn.2001NANAM38
0026BovineOhioNAA18Z5M39
MAP-K10eBovineWis.1990A18Z2M310
0883DeerMinn.2001NANAM310
0012MurineIowa1984A18Z1M310
0180BovineOhio2001A18Z3M311
MAP-14eHumanNANAA13Z15M311
0003HumanNANAA13Z15M311
0040CaprineOhioNAA18Z1M312
0558BovineMinn.2001NANAM313
0161BovineOhio2001A18Z1M314
0011BovineOhioNAA16Z12M315
0030BovineInd.1984A18Z2M316
0015CaprineIowa1984A18Z1M317
0004HumanNANAA18Z10M317
0014BovineOhioNAA18Z4M318
MAP-11eOvineS.D.NAA8NAN19
0007OvineS.D.NAA16Z18N20
0008OvineS.D.NAA16Z7N20
0099OvineS.D.NAA17Z8N20
Dg0.5010.9200.967
  • a Isolates were previously identified by MPIL analysis (20).

  • b Isolates were previously identified by AFLP analysis (20).

  • c Isolates were identified by MLSSR analysis based on a genetic distance of 0.43.

  • d Isolates were identified by MLSSR analysis based on 100% similarity.

  • e M. paratuberculosis isolates used to examine polymorphisms of 78 SSR loci.

  • f NA, not available.

  • g D was calculated by using the equation described previously (13).