TABLE 1.

Organisms used in the design of 16S rRNA gene sequences and their GenBank accession numbers

OrganismAccession no.
Staphylococcus aureus X68417 , AF146368 , AF076030 , D83353 , D83355 , D83357
Staphylococcus capitis AY030321
Staphylococcus epidermidis AY030342 , D83363 , D83362 , X75944
Staphylococcus auricularis D83358
Staphylococcus cohnii AB009936 , D83361
Staphylococcus hominis AY030318 , X66101 , L37601
Staphylococcus simulans D83373
Staphylococcus saprophyticus D83371 , Z26902 , L37596 , L20250
Staphylococcus arlettae AB009933
Staphylococcus condimenti Y15750
Staphylococcus delphini AB009938
Staphylococcus felis D83364
Staphylococcus gallinarum D83366
Staphylococcus intermedius AF193882
Staphylococcus kloosii AB009940
Staphylococcus lentus D83370
Staphylococcus linens AF527483
Streptococcus pneumoniae X58312 , AF003930
Streptococcus agalactiae AB023574
Streptococcus sp. group G AB002517
Streptococcus milleri U02917
Streptococcus mitis AY005045
Streptococcus mutans AF139603
Streptococcus pyogenes AB023575
Streptococcus salivarius U02923
Streptococcus sanguinis AF003928
Bacillus subtilis AB065370
Lactobacillus gasseri AF243165 , AF243144
Lactobacillus jensenii AF243176 , AF243153 , AF243143
Enterococcus faecium AB018210 , AF039901 , AF070223 , AJ276355 , AJ291731 , AJ291732 , AJ301830 , AJ420800 , AY057055
Nocardia otitidiscaviarum X80611
Kitasatospora setae AB022868
Pseudomonas aeruginosa AF094720
Stenotrophomonas maltophilia AJ293474 , AJ293469
Acinetobacter baumannii X81660
Acinetobacter lwoffii U10875
Helicobacter pylori AF302106 , AF348617 , AF363064 , AF512997 , AF535196 , AF535197 , AF535198 , AY022898 , AY062899 , U00679 , U01328 , U01329 , U01330 , U01331 , U01332
Helicobacter rodentium U96296 , U96297
Salmonella enterica serovar Typhi U88545 , Z47544
Salmonella enterica serovar Paratyphi X80682
Salmonella enterica serovar Enteritidis U90318
Klebsiella pneumoniae AB004753 , AF130981 , AF130982 , AF130983 , AF228918 , AF228919 , AJ23342 , Y17654 , Y17656 , Y17657 , X87276 , X93214 ,
Klebsiella oxytoca AB004754 , AF129440 , U78183 , U78184 , Y17655 , Y17667 ,
Enterobacter cloacae AJ251469
Enterobacter aerogenes AJ251468
Escherichia coli AB035920
Yersinia pestis Z75317
Yersinia entercolitica AF366378
Yersinia pseudotuberculosis AF366375
Shigella dysenteriae X96966 , X80680
Shigella sonnei X96964
Shigella boydii X94965
Shigella flexneri X96963
Haemophilus influenzae AF224305 , AF224306 , AF224308 , AF224309 ,
Haemophilus haemolyticus M75045
Haemophilus aegypticus M75044