TABLE 2.

Samples tested in this study and PCR resultsd

SampleSerogroupaSample sourceCulturebCountry of originSequence typeMultiplex PCRc
2008-183PACarriageYesNigerNDA
2008-185ACSFYesBurkina Faso2859A
2008-196ACSFYesBurkina Faso2859A
2008-197ACSFYesBurkina Faso2859A
2008-225ACSFYesBurkina Faso2859A
2008-226ACSFYesBurkina Faso2859A
2008-227ACSFYesBurkina Faso2859A
2007-155ACSFNoNiger7A
2007-158ACSFNoNiger7A
VN73BCSFYesVietnamNDB
2008-048BCSFYesVietnam6985B
2008-049BCSFYesVietnam6985B
2008-308BCSF + bloodYesFrance33B
2008-309BNAYesVietnam1576B
2008-315BBloodYesFrance162B
2007-053BCSFYesFrance269B
2007-055BCSFYesFrance1403B
2008-219CCSFYesFrance6969C
2007-047CCSF + bloodYesFrance11C
2007-054CBloodYesFrance6347C
2004-178CCSFYesFrance3747C
2008-223XCSFYesBurkina Faso181X
2008-267XCSFNoTogo181X
2008-269XCSFNoTogo181X
2008-270XCSFNoTogo181X
2008-271XCSFNoTogo181X
2007-114XCSFNoNiger181X
2007-151XCSFNoNiger5789X
2007-340XCSFYesBurkina Faso181X
2006-078XCSFYesNiger181X
2006-087XCSFYesNiger5789X
2008-109W135CSFYesBenin2881W135
2008-218W135CSFYesBurkina Faso2881W135
2008-278W135CSFNoTogoNDW135
2008-279W135CSFNoTogoNDW135
2008-280W135CSFNoTogoNDW135
2007-105W135CSFNoChad11W135
2007-107W135CSFYesBenin2881W135
2007-127W135CSFNoNiger2881W135
2007-166W135CSFYesChad2881W135
2007-448W135CSFYesTogo2881W135
2007-449W135CSFYesTogo2881W135
2007-457W135CSFYesTogo2881W135
2004-266W135CSFYesBurkina FasoNDW135
2008-235YCSFYesBurkina Faso4375Y
2007-111YBloodYesFrance4171Y
2007-188YCSFYesBurkina Faso2880Y
2007-443PAExpectorationYesFrance167Y
2006-092YCSFYesNiger4375Y
2004-035YCSFYesBenin767Y
2004-263YCSFYesBurkina FasoNDY
  • a Serogroup determined by agglutination tests or previous PCR analysis.

  • b DNA extracted with (yes) or without (no) culture.

  • c Serogroup determined by multiplex PCR (this study).

  • d PA, polyagglutination; NA, not available; ND, not determined.