TABLE 1.

Strains used in a molecular analysis of EV71

StrainGenBank accession no.SubgenogroupPlaceYrClinical diagnosis or outcomeaReference(s) or source
BrCr-CA-70U22521AUnited States1970Encephalitis1, 4, 6
2604-AUS-74AF135883B1Australia1974Meningitis1
2232-NY-77AF135871B1United States1977NA1
7633-PA-87AF009534B2United States1987Gastroenteritis1
7673-USA-87AF009535B2United States1987NA4
2222-USA-88AF009540B2United States1988Fever4
MY16/I/SAR/97AF376073B3Malaysia1997HFMD6
4350/SIN/98AF376119B3Singapore1998HFMD6
0899-MAA-97AY207642B3Malaysia1997Encephalitis4
5536/SIN/00AF376122B4Singapore2000HFMD6
S21082/SAR/00AF376084B4Malaysia2000HFMD6
2246-NY-87AF009542C1United States1987Paralysis1
S11051/SAR/98AF376081C1Malaysia1998HFMD6
1M-AUS-12-00AF376098C1Australia2000HFMD4
2M-AUS-3-99AF376103C2Australia1999Myelitis4
03750-MAA-97AY207615C2Malaysia1997HFMD4
001-KOR-00AY125966C3Korea2000NA4
013-KOR-00AY125976C3Korea2000NA4
SHZH-CHN-98AF302996C4China1998NA15
F2-CHN-00AB115491C4China2000HFMD15
H25-CHN-00AB115492C4China2000HFMD15
H26-CHN-00AB115493C4China2000HFMD15
671-Yamagata-98AB213614C2Japan1998HFMDThis study
705-Yamagata-98AB213615C2Japan1998HFMDThis study
932-Yamagata-99AB213616C2Japan1999HFMDThis study
957-Yamagata-99AB213617C2Japan1999HFMDThis study
983-Yamagata-99AB213618C2Japan1999HFMD, encephalitisThis study
1002-Yamagata-99AB213619C2Japan1999HFMDThis study
738-Yamagata-00AB213620B4Japan2000HFMDThis study
739-Yamagata-00AB213621B4Japan2000HFMDThis study
786-Yamagata-00AB213622B4Japan2000HFMDThis study
934-Yamagata-00AB177809B4Japan2000HFMDThis study
962-Yamagata-00AB213623B4Japan2000HFMDThis study
980-Yamagata-00AB213624B4Japan2000HFMDThis study
1067-Yamagata-00AB213625B4Japan2000HFMDThis study
1084-Yamagata-00AB213626B4Japan2000HFMDThis study
1116-Yamagata-00AB177810C2Japan2000HFMDThis study
1141-Yamagata-00AB177811B4Japan2000HFMDThis study
1585-Yamagata-01AB177812C2Japan2001HFMDThis study
1695-Yamagata-01AB213627C2Japan2001HerpanginaThis study
1814-Yamagata-01AB213628C2Japan2001HFMDThis study
2779-Yamagata-02AB213629C4Japan2002Viral exanthemThis study
75-Yamagata-03AB177813C4Japan2003HFMDThis study
100-Yamagata-03AB177814C4Japan2003HFMDThis study
452-Yamagata-03AB213630C4Japan2003HFMDThis study
638-Yamagata-03AB213631C4Japan2003HFMDThis study
828-Yamagata-03AB213632C4Japan2003Influenza-like illnessThis study
944-Yamagata-03AB213633C4Japan2003HFMDThis study
946-Yamagata-03AB213634C4Japan2003HFMDThis study
1144-Yamagata-03AB213635C4Japan2003HFMDThis study
1268-Yamagata-03AB213636C4Japan2003HFMDThis study
1469-Yamagata-03AB213637C4Japan2003HFMDThis study
1530-Yamagata-03AB213638C4Japan2003HFMDThis study
1716-Yamagata-03AB213639C4Japan2003HFMDThis study
1725-Yamagata-03AB213640C4Japan2003HFMDThis study
1799-Yamagata-03AB213641C4Japan2003HFMDThis study
1897-Yamagata-03AB213642C4Japan2003HFMDThis study
2091-Yamagata-03AB213643C4Japan2003HFMDThis study
2316-Yamagata-03AB213644C4Japan2003HFMDThis study
2321-Yamagata-03AB213645C4Japan2003HFMDThis study
2399-Yamagata-03AB213646C4Japan2003HFMDThis study
2419-Yamagata-03AB213647B5bJapan2003HFMDThis study
2542-Yamagata-03AB177815B5Japan2003HFMDThis study
2716-Yamagata-03AB177816B5Japan2003HFMDThis study
2933-Yamagata-03AB213648B5Japan2003HFMDThis study
2934-Yamagata-03AB213649B5Japan2003HFMDThis study
2972-Yamagata-03AB213650B5Japan2003HFMDThis study
2916-TAI-98AB286526C2Taiwan1998NAGenBank
3254-TAI-98AF286531C4Taiwan1998NAGenBank
S110031-SAR-03AY258307B5Malaysia2003NAGenBank
S19741-SAR-03AY258313B5Malaysia2003NAGenBank
  • a NA, not available.

  • b Proposed subgenogroup in this study.