TABLE 4.

Genetic variability observed in the 6 MLST loci and the 9 additional loci sequenced in 24 isolates

LocusMLST or additional locusaNo. of bp sequencedNo. of variable sites% Variable sitesNo. of alleles
FKS M58950.84
LEU2 M51251.03
NMT1 M60791.54
TRP1 M41961.44
UGP1 M61630.52
URA3 M60261.04
Total for MLST loci3,345341.021
CCA1 A81581.04
ERG11 A61430.53
HIS3 A572132.34
MSH4 A68281.23
NEP1 A52230.63
PSA1 A59730.54
RAP1 A59810.22
RRN1 A85740.53
SNF A637101.64
Total for additional loci5,894530.930
  • a The 6 loci comprising the MLST scheme used to type the full collection of 109 isolates are indicated by the letter M; the 9 additional loci sequenced in 24 isolates only are indicated by the letter A.