TABLE 3.

Sequence identity of a 348-nt region of ORF2 among serotype 1 (deduced from genotype) central Australian astrovirus strains and prototype serotype 1 astrovirus

Strain% Sequence identity in (yr of isolation)a:
Prototype1982, 1984, and 1985199319951996 (CAV1F)1998 (CAV1G)
CAV1ACAV1BCAV1CCAV1DCAV1E
Prototype96.697.196.696.896.691.191.1
CAV1A96.798.998.398.998.694.094.3
CAV1B96.710099.410099.793.493.7
CAV1C96.710010099.499.192.893.1
CAV1D96.710010010099.793.794.0
CAV1E96.710010010010094.094.3
CAV1F96.710010010010010098.9
CAV1G96.7100100100100100100
  • a Numbers at the top right indicate results of a pairwise comparison of the 348-nt regions, and numbers at the bottom left indicate results of pairwise comparison of the deduced amino acid sequences of the regions.