Table 4.

Comparison of Roche-454 and Illumina hits from CSF 1000: viruses identifieda

Virus identifiedRoche-454Illumina
No. of hitsIdentity (%)No. of hitsIdentity (%)
RABV19956999
PV03799
HHV-409599
TTV1767816,79387
HHV-107100
HPV-1801100
Rift Valley fever virus0399
  • a The percent identity values correspond to averages. The percent identities for TTV, Rift Valley fever virus, and HPV-18 were obtained after comparison to the closest reference sequences identified by BLAST in the database nr. Other viruses are as described in Table 2.