TABLE 3

Concordance of results from routine typing and VirulenceFinder

Virulence geneNo. of isolates with the virulence genea found by:
Routine typingVirulenceFinder
eae3030
vtx12424
vtx229 (28)27
ehxA3231 (32)
saa10 (1)
bfpA2 (0)0
  • a When there was a discrepancy between the results for routine typing and VirulenceFinder, the value after retyping at the SSI or after reference mapping of raw reads is shown in parentheses.