TABLE 1

Selected strain locations and descriptions, accession numbers corresponding to sequenced regions, farm locations and flock sizes, age and number of samples per bird, observed NDV status and mortality, and HI titer data

StrainAccession no.LatitudeLongitudeFlock sizeAge of bird (days), hostNo. of samples collected% positive for NDV% mortalityHI titer
MeanSD
Chicken/Pak/Bahwalpur/300/2013KF76155129.395671.683636,00022, broiler169465.71.35
Chicken/Pak/Faisal abad/03/2013KF76153831.41873.07930,00028, broiler7100166.00.97
Chicken/Pak/Gujranwala/589/2013KF76153632.1574.183336,00031, layer2982156.91.06
Chicken/Pak/Gujrat/234/2013KF76154832.573874.078935,00035, broiler5556156.00.85
Chicken/Pak/Hafiz abad/611/2013KF76153532.0773.686,00021, broiler2100315.41.30
Chicken/Pak/Kasur/08/2013KF76154031.11774.450277,0008, broiler1753405.72.12
Chicken/Pak/Khanewal/55/2013KF76155230.30371.933315,00012, broiler239176.00.89
Chicken/Pak/Lahore/02/2013KF76153731.54574.34061,00,00037, broiler16100505.82.44
Chicken/Pak/Lodhran/62/2013KF76154329.533371.63332,00028, layer610055.70.98
Chicken/Pak/Multan/43/2013KF76154130.197871.46978,00042, broiler4881456.81.65
Chicken/Pak/Muzafargarh/160/2013KF76154930.070371.193322,00021, broiler8100235.40.81
Chicken/Pak/Nankana Sahib/155/2013KF76154631.4573.79,00025, broiler6100506.81.69
Chicken/Pak/Norwal/40/2013KF76155032.216774.9517,00026, broiler1781335.31.13
Chicken/Pak/Okara/118/2013KF76154730.809173.447762,00029, broiler9100276.50.63
Chicken/Pak/Rawalpindi/188/2013KF76153433.673.033316,00022, layer467404.81.13
Chicken/Pak/Sahiwal/06/2013KF76153930.583373.333323,00035, broiler7100436.41.75
Chicken/Pak/Sargodha/212/2013KF76153332.083672.67113,00022, broiler3100205.10.81
Chicken/Pak/Sheikhpura/22/2013KF76154531.71573.98529,00024, broiler1457105.00.73
Chicken/Pak/Sialkut/88/2013KF76154432.497274.53616,00049, broiler710075.61.09
Chicken/Pak/Vehari/46/2013KF76154230.041972.35287,00022, broiler610075.90.85